mRNA_M-pyrifera_M_contig102228.479.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig102228.479.1 vs. uniprot
Match: A0A6H5KMF3_9PHAE (Hist_deacetyl domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KMF3_9PHAE) HSP 1 Score: 232 bits (592), Expect = 6.480e-67 Identity = 123/205 (60.00%), Postives = 150/205 (73.17%), Query Frame = 1 Query: 46 TTVLAHSVCAEHFTSKPPMKRGGALIAPENPRRLEVLLSRKHGSLRSAEFGDGVEWEFAPPRADMADILRVHEYTYVRRVLRAVSSTSPARP--LSHIDGDTAVSQNSWQAALRAAGSVVEATRRVVEGKARNAFCLVRPPGHHAGPMGLVTCRRNPMGSHGFCLVNNVAIGAAFARARLEHAGVERVAIVDFDVHHGNGTEACV 654 T VL H +C +H S PP++R GA PEN +RLEV+ + G LR+ EF G+EW+ P RA++AD+LRVH++ YV ++ R SS P P L+H+DGDTAVS NS++AALRAAGSV + RV+ G+ RNAFC VRPPGHHAG GLVTC + GSHGFCL+NNVAIGAA+AR H GVERVAIVDFDVHHGNGTE V Sbjct: 552 TAVLHHPLCLQHH-SCPPIRRWGADPPPENVKRLEVIYNEDSGVLRADEFS-GLEWDSNPSRAELADVLRVHDFNYVEKLERLCSSI-PEGPGSLAHLDGDTAVSHNSFEAALRAAGSVCDGVDRVMTGRNRNAFCAVRPPGHHAGTRGLVTCANDGTGSHGFCLLNNVAIGAAYARCVHRHTGVERVAIVDFDVHHGNGTEHIV 753
BLAST of mRNA_M-pyrifera_M_contig102228.479.1 vs. uniprot
Match: A0A7S4IZS9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IZS9_9STRA) HSP 1 Score: 217 bits (552), Expect = 7.240e-64 Identity = 120/212 (56.60%), Postives = 148/212 (69.81%), Query Frame = 1 Query: 34 PSALTTVLAHSVCAEHFTSKPPMKR--GGALIAPENPRRLEVLLSRKHGSLRSAEFGDG-VEWEFAPPRADMADILRVHEYTYVRRVLRAVSSTSPARP--LSHIDGDTAVSQNSWQAALRAAGSVVEATRRVVEGKARNAFCLVRPPGHHAGPMGLVTCRRNPMGSHGFCLVNNVAIGAAFARARLEHAGVERVAIVDFDVHHGNGTEACV 654 P A T +L H +C+ H S PP+ R G + PEN RRL VLL+ + G LRS EF G WE RA MAD+L+VHEY YV R+ + SS P P ++ +D DTAVS+ S++AA+RAAG V EA RV+ G RNAFC VRPPGHHAGP G+VTC +P GSHGFCL+NNVAIGA++AR+ + GV+RVAI+DFDVHHGNGTE V Sbjct: 64 PDAKTLLLCHELCSRHM-SCPPITREEGFSDPPPENVRRLRVLLNDEVGILRSGEFHPGNASWESEARRASMADVLKVHEYGYVERISQLCSSL-PDHPKAIASLDADTAVSRWSFEAAMRAAGGVCEAVDRVMSGDYRNAFCAVRPPGHHAGPRGVVTCPNDPDGSHGFCLLNNVAIGASYARSMYRNEGVKRVAIIDFDVHHGNGTEEIV 273
BLAST of mRNA_M-pyrifera_M_contig102228.479.1 vs. uniprot
Match: A0A7S3Q0M5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q0M5_9STRA) HSP 1 Score: 219 bits (557), Expect = 3.200e-62 Identity = 111/209 (53.11%), Postives = 147/209 (70.33%), Query Frame = 1 Query: 34 PSALTTVLAHSVCAEHFTSKPPMKRGGALIAPENPRRLEVLLSRKHGSLRSAEFGDGVEWEFAPPRADMADILRVHEYTYVRRVLRAVSSTSPARP--LSHIDGDTAVSQNSWQAALRAAGSVVEATRRVVEGKARNAFCLVRPPGHHAGPMGLVTCRRNPMGSHGFCLVNNVAIGAAFARARLEHAGVERVAIVDFDVHHGNGTEACV 654 P A T ++ H +C++H T PP+ R PEN RRL VLL + G LR AEF DG +WE RA MAD+L+VHEY Y+ + + + S P P ++H+D DT +S+ S+++A+RA+GSV EA R++ G RNAFC VRPPGHHAGP G+V C +P GSHGFCL+NNVAIGAA+AR + G+++VAI+DFDVHHGNGTEA + Sbjct: 553 PEAQTFLICHELCSQHLTC-PPISRNSTEPPPENVRRLSVLLDDEVGILRGAEF-DGCKWEGESRRAAMADVLKVHEYKYIETISQ-ICSEIPDHPNAIAHLDTDTGMSRWSFESAMRASGSVCEAVDRIMAGDFRNAFCAVRPPGHHAGPRGIVKCENDPEGSHGFCLLNNVAIGAAYARCMYRNDGIKKVAIIDFDVHHGNGTEAVI 758
BLAST of mRNA_M-pyrifera_M_contig102228.479.1 vs. uniprot
Match: A0A5J4XLP6_9CHLO (Hist_deacetyl domain-containing protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XLP6_9CHLO) HSP 1 Score: 213 bits (542), Expect = 1.690e-61 Identity = 111/205 (54.15%), Postives = 142/205 (69.27%), Query Frame = 1 Query: 46 TTVLAHSVCAEHFTSKPPMKRGGALIAPENPRRLEVLLSRKHGSLRSAEFGDGVEWEFAPPRADMADILRVHEYTYVRRVLRAVSSTSPARP--LSHIDGDTAVSQNSWQAALRAAGSVVEATRRVVEGKARNAFCLVRPPGHHAGPMGLVTCRRNPMGSHGFCLVNNVAIGAAFARARLEHAGVERVAIVDFDVHHGNGTEACV 654 T V+A + C H T P+ R G I PEN RL+VL G LRS+EF +EW+ R MADILRVHE++YVR L+ + ++ P P + H+DGDTA+S ++QAAL A G + A RVV+G+ RNAFC +RPPGHHAGP G+V C +P GSHGFCL+NN+AI AA+A HAG++RVA++DFDVHHGNGTEACV Sbjct: 334 TLVVAPAECFGHRTCPEPIVRDGPDIPPENVNRLKVLTDPATGILRSSEFST-LEWDETSRRGCMADILRVHEWSYVRS-LQHMCASIPDIPAVVGHLDGDTAISNGTFQAALAAVGGICNAVDRVVKGEVRNAFCAIRPPGHHAGPTGVVACANDPTGSHGFCLLNNLAIAAAYAMNAHRHAGIKRVALLDFDVHHGNGTEACV 536
BLAST of mRNA_M-pyrifera_M_contig102228.479.1 vs. uniprot
Match: A0A7S2UJ04_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UJ04_9STRA) HSP 1 Score: 216 bits (550), Expect = 3.070e-61 Identity = 115/213 (53.99%), Postives = 147/213 (69.01%), Query Frame = 1 Query: 34 PSALTTVLAHSVCAEHFTSKPPMKRGGALIA----PENPRRLEVLLSRKHGSLRSAEFGDGVEWEFAPPRADMADILRVHEYTYVRRVLRAVSSTSPARP--LSHIDGDTAVSQNSWQAALRAAGSVVEATRRVVEGKARNAFCLVRPPGHHAGPMGLVTCRRNPMGSHGFCLVNNVAIGAAFARARLEHAGVERVAIVDFDVHHGNGTEACV 654 P+ T +L H +C H T PP+ RG + + PEN RRL VL++ G LR +EF DG WE RA ++D+LRVHEY+YV R+ A + P P ++ +DGDTAVS+ S++AALRAAGSV EA +V+ G RN+FC VRPPGHHAGP G+V C +P GSHGFCL+NNVAIGAA+AR + G+ +VAI+DFDVHHGNGTE V Sbjct: 570 PAGSTLLLCHELCNRHKTC-PPIARGTGIASSEPPPENVRRLHVLINEDVGILRCSEF-DGCSWETEARRAAISDVLRVHEYSYVERISHACAQI-PDHPSAIAQLDGDTAVSRWSFEAALRAAGSVCEAVDKVMSGDFRNSFCAVRPPGHHAGPRGIVKCANDPEGSHGFCLLNNVAIGAAYARTMYRNDGIRKVAIIDFDVHHGNGTEEIV 779
BLAST of mRNA_M-pyrifera_M_contig102228.479.1 vs. uniprot
Match: A0A7S2QZ77_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2QZ77_9STRA) HSP 1 Score: 213 bits (542), Expect = 3.950e-61 Identity = 112/212 (52.83%), Postives = 149/212 (70.28%), Query Frame = 1 Query: 34 PSALTTVLAHSVCAEHFTSKPPMKRGGALIA---PENPRRLEVLLSRKHGSLRSAEFGDGVEWEFAPPRADMADILRVHEYTYVRRVLRAVSSTSPARP--LSHIDGDTAVSQNSWQAALRAAGSVVEATRRVVEGKARNAFCLVRPPGHHAGPMGLVTCRRNPMGSHGFCLVNNVAIGAAFARARLEHAGVERVAIVDFDVHHGNGTEACV 654 P+ T V+ H +C+ H T P+ R L + PEN RRL VLL+ + G LR +EF +G WE RA MADIL++HEY+YV ++ + + S P P ++ +D DTA+S+ S++ ALRA+GSV +A RV+ G RNAFC VRPPGHHAGP G+V C +P GSHGFCL+NNVAIGAA+AR+ + G+++VAI+DFDVHHGNGTEA V Sbjct: 199 PNGKTLVICHELCSRHLTCS-PISRNSMLNSDPPPENVRRLNVLLNNEVGILRCSEF-EGCVWEGEARRASMADILKIHEYSYVEKISQ-ICSELPDHPNAIATLDADTAISRWSFEGALRASGSVCDAVDRVMAGDFRNAFCAVRPPGHHAGPRGIVKCANDPEGSHGFCLLNNVAIGAAYARSMYRNDGIKKVAIIDFDVHHGNGTEAIV 407
BLAST of mRNA_M-pyrifera_M_contig102228.479.1 vs. uniprot
Match: A0A8J9S9S2_9CHLO (Probable type-2 histone deacetylase 2 at C-terminar half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9S9S2_9CHLO) HSP 1 Score: 213 bits (543), Expect = 5.860e-61 Identity = 108/201 (53.73%), Postives = 141/201 (70.15%), Query Frame = 1 Query: 52 VLAHSVCAEHFTSKPPMKRGGALIAPENPRRLEVLLSRKHGSLRSAEFGDGVEWEFAPPRADMADILRVHEYTYVRRVLRAVSSTSPARPLSHIDGDTAVSQNSWQAALRAAGSVVEATRRVVEGKARNAFCLVRPPGHHAGPMGLVTCRRNPMGSHGFCLVNNVAIGAAFARARLEHAGVERVAIVDFDVHHGNGTEACV 654 ++A C H T P+ RG PEN RL VL + G LRS EF D ++WE PP A ++DILRVHE++YVR + A ++ L H+DGDTA+S S++AAL AAG+V+ A RVV+ + R+AFC VRPPGHHAGP GLVTC +P GSHGFCL +N+AIGAA+A + + AG+ RVA++DFDVHHGNGT+AC+ Sbjct: 286 LVAPDECHMHNTCPFPILRGSRSPPPENINRLHVLTDSELGILRSTEFAD-LQWETQPPHARISDILRVHEWSYVRELQNACAALGE-HDLGHLDGDTAISAGSFRAALAAAGAVIAAVDRVVKQQVRSAFCAVRPPGHHAGPTGLVTCANDPHGSHGFCLFSNLAIGAAYAMTQHQDAGIRRVALLDFDVHHGNGTQACI 484
BLAST of mRNA_M-pyrifera_M_contig102228.479.1 vs. uniprot
Match: A0A7S1B8G6_9STRA (Hypothetical protein n=4 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B8G6_9STRA) HSP 1 Score: 213 bits (542), Expect = 1.240e-60 Identity = 109/209 (52.15%), Postives = 149/209 (71.29%), Query Frame = 1 Query: 34 PSALTTVLAHSVCAEHFTSKPPMKRGGALIAPENPRRLEVLLSRKHGSLRSAEFGDGVEWEFAPPRADMADILRVHEYTYVRRVLRAVSSTSPARPLSH--IDGDTAVSQNSWQAALRAAGSVVEATRRVVEGKARNAFCLVRPPGHHAGPMGLVTCRRNPMGSHGFCLVNNVAIGAAFARARLEHAGVERVAIVDFDVHHGNGTEACV 654 P + T +L H +C++H+ S PP+ RGG PEN RRLEVL++ + G L S EF V WE RA MAD+L+VHEY+YV ++ R + + P P + +D DT +S+ S+++A+RAAGSV EA +V+ G RNAFC +RPPGHHAGP G+V+C +P GSHGFCL+NNVAIGAA+AR + G++++AI+DFDVHHGNGTE + Sbjct: 315 PPSKTILLCHELCSKHY-SCPPIYRGGPDPPPENIRRLEVLINSETGILNSKEFCSCV-WETNARRASMADVLKVHEYSYVEKISR-ICNALPDHPQASFPLDPDTVISKWSFESAMRAAGSVCEAVDKVMSGDFRNAFCAIRPPGHHAGPRGIVSCLNDPEGSHGFCLLNNVAIGAAYARTMYRNDGIKKIAIIDFDVHHGNGTEEII 520
BLAST of mRNA_M-pyrifera_M_contig102228.479.1 vs. uniprot
Match: I0Z5S1_COCSC (Arginase/deacetylase n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z5S1_COCSC) HSP 1 Score: 211 bits (538), Expect = 2.580e-60 Identity = 109/203 (53.69%), Postives = 139/203 (68.47%), Query Frame = 1 Query: 46 TTVLAHSVCAEHFTSKPPMKRGGALIAPENPRRLEVLLSRKHGSLRSAEFGDGVEWEFAPPRADMADILRVHEYTYVRRVLRAVSSTSPARPLSHIDGDTAVSQNSWQAALRAAGSVVEATRRVVEGKARNAFCLVRPPGHHAGPMGLVTCRRNPMGSHGFCLVNNVAIGAAFARARLEHAGVERVAIVDFDVHHGNGTEACV 654 T ++A C H T P+ RG PEN +RL VL + G LRSAEF D +EWE PP A + DILRVHE++YVR L+ + L H+DGDTA+S S+ AAL AAG+V+ A RVV+ + R+AFC VRPPGHHAGP G+V C P GSHGFCL +N+AIGAA+A + AG++RVA++DFDVHHGNGT+AC+ Sbjct: 283 TLLVAPDECHLHNTCPFPILRGSRPPPPENIKRLHVLTDSELGILRSAEFAD-LEWETWPPHARITDILRVHEWSYVR-TLQNTCGALEGQELGHLDGDTALSAGSFTAALAAAGAVIAAVDRVVKQQVRSAFCAVRPPGHHAGPTGVVPCANEPTGSHGFCLFSNLAIGAAYAMTHYQDAGIQRVALLDFDVHHGNGTQACI 483
BLAST of mRNA_M-pyrifera_M_contig102228.479.1 vs. uniprot
Match: A0A7S2LK53_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LK53_9STRA) HSP 1 Score: 211 bits (538), Expect = 8.420e-60 Identity = 113/212 (53.30%), Postives = 144/212 (67.92%), Query Frame = 1 Query: 34 PSALTTVLAHSVCAEHFTSKPPMKRG---GALIAPENPRRLEVLLSRKHGSLRSAEFGDGVEWEFAPPRADMADILRVHEYTYVRRVLRAVSSTSPARP--LSHIDGDTAVSQNSWQAALRAAGSVVEATRRVVEGKARNAFCLVRPPGHHAGPMGLVTCRRNPMGSHGFCLVNNVAIGAAFARARLEHAGVERVAIVDFDVHHGNGTEACV 654 P T +L H VC +H T PP+ RG + PEN RRL VL++ G LR EF G +W RA +AD+L+VHEYTYV + + S+T P P + +D DT VS S++AALRAAGSV EA +V+ G RNAFC +RPPGHHAGP G+VTC +P GSHGFCL+NN+AIGAA+AR+ + G+++VAI+DFDVHHGNGTE V Sbjct: 435 PDGSTLILCHEVCLQHRTC-PPIVRGVEESSEPPPENVRRLNVLINNDDGILRCGEFS-GCKWNTDVRRAALADVLKVHEYTYVEKTSKLCSAT-PDHPKAIQTLDADTTVSHWSFEAALRAAGSVCEAVDKVMAGDYRNAFCAIRPPGHHAGPRGIVTCPNDPDGSHGFCLLNNIAIGAAYARSMYRNDGIKKVAIIDFDVHHGNGTEEIV 643 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102228.479.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig102228.479.1 >prot_M-pyrifera_M_contig102228.479.1 ID=prot_M-pyrifera_M_contig102228.479.1|Name=mRNA_M-pyrifera_M_contig102228.479.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=218bp PSSPDAPASTLPSALTTVLAHSVCAEHFTSKPPMKRGGALIAPENPRRLEback to top mRNA from alignment at M-pyrifera_M_contig102228:8..661+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig102228.479.1 ID=mRNA_M-pyrifera_M_contig102228.479.1|Name=mRNA_M-pyrifera_M_contig102228.479.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=654bp|location=Sequence derived from alignment at M-pyrifera_M_contig102228:8..661+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig102228:8..661+ >mRNA_M-pyrifera_M_contig102228.479.1 ID=mRNA_M-pyrifera_M_contig102228.479.1|Name=mRNA_M-pyrifera_M_contig102228.479.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1308bp|location=Sequence derived from alignment at M-pyrifera_M_contig102228:8..661+ (Macrocystis pyrifera P11B4 male)back to top |