mRNA_M-pyrifera_M_contig102216.475.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig102216.475.1
Unique NamemRNA_M-pyrifera_M_contig102216.475.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig102216.475.1 vs. uniprot
Match: A0A2E6HNK6_9GAMM (Amidase n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2E6HNK6_9GAMM)

HSP 1 Score: 342 bits (877), Expect = 2.350e-113
Identity = 170/220 (77.27%), Postives = 193/220 (87.73%), Query Frame = 1
Query:    1 RSLTEAYLARIAAYDQNGPTLNAVVTTNPQALARADELDAAMRETGGFVGPLHGIPILVKDNIETAAMPTTQGTIGMAGYQPREDASVIQHLESAGAVILGKTTLPDFATSWWAYSSLSGETRNPYALDRDPGGSSSGSGAAAAANFAMAALGTDCGGSIRVPSSFDNLVGVRSTPGMISRKGAGTLVFFQDTIGPMARTVTDAAIVFDALVGYDAGDTL 660
            R L +AY  RI+AYDQ GP++N+VVT +  A  RAD LDA+  E+G F GPLHG+PILVKDN+ET +MPTTQGTIG+A ++P  +A+VI  LE+AGA+ILGKTTLPDFATSWWAYSSLSGETRNPYALDRDPGGSS+GSGAAAAANFAMAA+GTDCGGSIRVPSSFDNLVG+RSTPG+ISRKGAGTLVFFQDTIGPM RTV DAA VFD LVGYD  D+L
Sbjct:   34 RGLVDAYRERISAYDQRGPSINSVVTVDDAAAGRADALDASFAESGKFSGPLHGMPILVKDNVETISMPTTQGTIGLADFRPTSNATVIDRLEAAGAIILGKTTLPDFATSWWAYSSLSGETRNPYALDRDPGGSSAGSGAAAAANFAMAAIGTDCGGSIRVPSSFDNLVGIRSTPGLISRKGAGTLVFFQDTIGPMTRTVADAARVFDTLVGYDPHDSL 253          
BLAST of mRNA_M-pyrifera_M_contig102216.475.1 vs. uniprot
Match: A0A523NZM0_9PROT (Amidase n=2 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523NZM0_9PROT)

HSP 1 Score: 338 bits (866), Expect = 1.050e-111
Identity = 172/220 (78.18%), Postives = 189/220 (85.91%), Query Frame = 1
Query:    1 RSLTEAYLARIAAYDQNGPTLNAVVTTNPQALARADELDAAMRETGGFVGPLHGIPILVKDNIETAAMPTTQGTIGMAGYQPREDASVIQHLESAGAVILGKTTLPDFATSWWAYSSLSGETRNPYALDRDPGGSSSGSGAAAAANFAMAALGTDCGGSIRVPSSFDNLVGVRSTPGMISRKGAGTLVFFQDTIGPMARTVTDAAIVFDALVGYDAGDTL 660
            R+L +AY ARI AYDQ GPT+NA++T N  A ARAD LDA    +G   GPLHGIPILVKDNIETAAMPTTQG IG+A +QP  DA+VIQ LES GA+ILGKTTLPDFATSWWAYSSLSG TRNPYAL+ DPGGSS+GSGAA AANFAMAALGTDCGGS+RVPSSFDNLVG+RSTPG+ISR GA TLVFFQDTIGPM R+VTDAA VFDALVGYD  D+L
Sbjct:   33 RALVDAYRARIDAYDQRGPTINAIITINDAAGARADALDAEFAVSGKLSGPLHGIPILVKDNIETAAMPTTQGCIGLAEFQPTVDATVIQQLESRGAIILGKTTLPDFATSWWAYSSLSGNTRNPYALECDPGGSSAGSGAAVAANFAMAALGTDCGGSVRVPSSFDNLVGIRSTPGLISRNGAATLVFFQDTIGPMTRSVTDAARVFDALVGYDPADSL 252          
BLAST of mRNA_M-pyrifera_M_contig102216.475.1 vs. uniprot
Match: A0A7Y3H0W0_9DELT (Amidase n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7Y3H0W0_9DELT)

HSP 1 Score: 284 bits (726), Expect = 1.020e-90
Identity = 147/219 (67.12%), Postives = 167/219 (76.26%), Query Frame = 1
Query:    4 SLTEAYLARIAAYDQNGPTLNAVVTTNPQALARADELDAAMRETGGFVGPLHGIPILVKDNIETAAMPTTQGTIGMAGYQPREDASVIQHLESAGAVILGKTTLPDFATSWWAYSSLSGETRNPYALDRDPGGSSSGSGAAAAANFAMAALGTDCGGSIRVPSSFDNLVGVRSTPGMISRKGAGTLVFFQDTIGPMARTVTDAAIVFDALVGYDAGDTL 660
            +L  AY  RI AYDQ    LNA+V+ NP+A A+A+ LDA    +G   GPLHGIP+LVKDNIET  MPT+ G    A Y+P+ DA+VI+ L  AGA+ILGKT LPDFATSWW YSS SGETRNPY L  DPGGSSSG+GAA A+NFA   LGTDCGGSIR+PSSFDNLVGVR TPG+ISR G   LVF QDTIGPMAR+V DA  VFDALVG+DA D L
Sbjct:   26 ALVAAYEDRIEAYDQQAAALNAIVSLNPEARAQAERLDAEYAASGKPSGPLHGIPVLVKDNIETEEMPTSFGNAAFAEYRPKSDATVIRKLREAGAIILGKTALPDFATSWWGYSSRSGETRNPYDLAHDPGGSSSGTGAAIASNFAAVGLGTDCGGSIRLPSSFDNLVGVRCTPGLISRDGLAMLVFQQDTIGPMARSVEDAVRVFDALVGFDAADDL 244          
BLAST of mRNA_M-pyrifera_M_contig102216.475.1 vs. uniprot
Match: UPI001A9E0A56 (amidase n=1 Tax=Rubrobacter marinus TaxID=2653852 RepID=UPI001A9E0A56)

HSP 1 Score: 275 bits (704), Expect = 4.530e-90
Identity = 139/218 (63.76%), Postives = 164/218 (75.23%), Query Frame = 1
Query:    1 RSLTEAYLARIAAYDQNGPTLNAVVTTNPQALARADELDAAMRETGGFVGPLHGIPILVKDNIETAAMPTTQGTIGMAGYQPREDASVIQHLESAGAVILGKTTLPDFATSWWAYSSLSGETRNPYALDRDPGGSSSGSGAAAAANFAMAALGTDCGGSIRVPSSFDNLVGVRSTPGMISRKGAGTLVFFQDTIGPMARTVTDAAIVFDALVGYDAGD 654
            R L E YLARI AYD++GP LNA++T N   LA+A+ELD + +++G  VGPLHGIP+L+KD  ETA + TT G++   GY P EDA+ +  L+ AGA+IL KT LPDFATSW+AYSS  GET+NPY LDRDPGGSSSG+GAA AAN     +G D GGSIRVPSSFDNLVGVR T G+ISRKG   LV FQDT GPM RTV DAA + D LVGYD  D
Sbjct:   28 RRLVELYLARIEAYDKSGPGLNAIITVNENVLAQAEELDLSFQQSGELVGPLHGIPVLLKDQAETAGIRTTFGSVAFEGYVPEEDATAVGRLKEAGALILAKTNLPDFATSWFAYSSAGGETKNPYDLDRDPGGSSSGTGAAVAANLGAVGIGEDTGGSIRVPSSFDNLVGVRVTTGLISRKGMSPLVVFQDTAGPMTRTVRDAAALLDVLVGYDPED 245          
BLAST of mRNA_M-pyrifera_M_contig102216.475.1 vs. uniprot
Match: UPI00166E8FEE (amidase n=1 Tax=Chelatococcus reniformis TaxID=1494448 RepID=UPI00166E8FEE)

HSP 1 Score: 278 bits (712), Expect = 1.330e-88
Identity = 140/217 (64.52%), Postives = 166/217 (76.50%), Query Frame = 1
Query:    7 LTEAYLARIAAYDQNGPTLNAVVTTNPQALARADELDAAMRETGGFVGPLHGIPILVKDNIETAAMPTTQGTIGMAGYQPREDASVIQHLESAGAVILGKTTLPDFATSWWAYSSLSGETRNPYALDRDPGGSSSGSGAAAAANFAMAALGTDCGGSIRVPSSFDNLVGVRSTPGMISRKGAGTLVFFQDTIGPMARTVTDAAIVFDALVGYDAGDT 657
            L + YL RIAAYDQ+GP LN+ V  NP ALA A  LD A   +G   GPLHGIP+ VKD  ET  + T  G +G++GY P EDA+V+  L+ AGA+ILGKT +PDFATSW+ YSS++GET+NPY LDRDPGGSS+G+GAA AAN A   +G D GGSIR+PSSFDNLVGVR TPG+ISR G   LV FQDT GPMARTVTDAAI+ DA+VGYD+ DT
Sbjct:   27 LVQGYLDRIAAYDQSGPALNSFVKLNPNALAEAAALDEAFAASGTLSGPLHGIPVAVKDQAETKGIETRFGCVGLSGYVPEEDATVVAKLKQAGAIILGKTAMPDFATSWFGYSSVNGETKNPYDLDRDPGGSSAGTGAAIAANLATVGIGEDTGGSIRLPSSFDNLVGVRVTPGLISRSGLSPLVVFQDTAGPMARTVTDAAILLDAIVGYDSKDT 243          
BLAST of mRNA_M-pyrifera_M_contig102216.475.1 vs. uniprot
Match: A0A4U1LDV2_MICLU (Amidase n=1 Tax=Micrococcus luteus TaxID=1270 RepID=A0A4U1LDV2_MICLU)

HSP 1 Score: 278 bits (710), Expect = 2.520e-88
Identity = 137/218 (62.84%), Postives = 171/218 (78.44%), Query Frame = 1
Query:    1 RSLTEAYLARIAAYDQNGPTLNAVVTTNPQALARADELDAAMRETGGFVGPLHGIPILVKDNIETAAMPTTQGTIGMAGYQPREDASVIQHLESAGAVILGKTTLPDFATSWWAYSSLSGETRNPYALDRDPGGSSSGSGAAAAANFAMAALGTDCGGSIRVPSSFDNLVGVRSTPGMISRKGAGTLVFFQDTIGPMARTVTDAAIVFDALVGYDAGD 654
            R + +AYL RIAA D  G  LN+++T N +AL RADELD  +RETG   GPLHG+ I+ KDNI+T  M TT G+  + G++P  DA+VI  L+ AGA++L KTTLPDFATSW+++SS+SGET+NPY L+ DPGGSSSGS AA AAN A+A LGTDCGGS+R+PSSF NLVGVRSTPG++ R G G LV FQDT+GP+ARTV DA  VFDA+ G+D+GD
Sbjct:   29 REVVQAYLDRIAAVDAGGAHLNSIITLNEEALTRADELDEQLRETGELTGPLHGVVIVAKDNIDTQDMDTTCGSEALKGFRPEVDAAVISRLKDAGAIVLAKTTLPDFATSWFSFSSVSGETKNPYDLNHDPGGSSSGSAAAVAANLAVAGLGTDCGGSVRLPSSFCNLVGVRSTPGVVPRTGTGFLVAFQDTVGPLARTVEDAVTVFDAISGFDSGD 246          
BLAST of mRNA_M-pyrifera_M_contig102216.475.1 vs. uniprot
Match: A0A6G8QD37_9ACTN (Amidase n=1 Tax=Rubrobacter tropicus TaxID=2653851 RepID=A0A6G8QD37_9ACTN)

HSP 1 Score: 278 bits (710), Expect = 3.300e-88
Identity = 141/218 (64.68%), Postives = 161/218 (73.85%), Query Frame = 1
Query:    1 RSLTEAYLARIAAYDQNGPTLNAVVTTNPQALARADELDAAMRETGGFVGPLHGIPILVKDNIETAAMPTTQGTIGMAGYQPREDASVIQHLESAGAVILGKTTLPDFATSWWAYSSLSGETRNPYALDRDPGGSSSGSGAAAAANFAMAALGTDCGGSIRVPSSFDNLVGVRSTPGMISRKGAGTLVFFQDTIGPMARTVTDAAIVFDALVGYDAGD 654
            R L E YLARI AYD+NGP LN+++T NP  L  ADELD++    G FVGPLHGIP+LVKD  ETA + TT G++    Y P EDA+ +  L+ AGA+IL KT LPDFATSW+AYSS  GET+NPY LDRDPGGSS G+GAA AAN     +G D GGSIRVPSSFDNLVG R T G+ISRKG   LV FQDT GPM RTV DAAI+ DALVGYD  D
Sbjct:   28 RGLVELYLARIEAYDKNGPELNSILTVNPNVLDEADELDSSFGRRGEFVGPLHGIPVLVKDQAETAGIRTTFGSVAFEDYVPEEDATAVGRLKEAGALILAKTNLPDFATSWFAYSSAGGETKNPYDLDRDPGGSSGGTGAAVAANLGAVGIGEDTGGSIRVPSSFDNLVGFRVTTGLISRKGMSPLVVFQDTAGPMTRTVKDAAILLDALVGYDPAD 245          
BLAST of mRNA_M-pyrifera_M_contig102216.475.1 vs. uniprot
Match: UPI001F4C709A (amidase n=2 Tax=Nesterenkonia TaxID=57494 RepID=UPI001F4C709A)

HSP 1 Score: 276 bits (707), Expect = 7.110e-88
Identity = 133/212 (62.74%), Postives = 168/212 (79.25%), Query Frame = 1
Query:   19 YLARIAAYDQNGPTLNAVVTTNPQALARADELDAAMRETGGFVGPLHGIPILVKDNIETAAMPTTQGTIGMAGYQPREDASVIQHLESAGAVILGKTTLPDFATSWWAYSSLSGETRNPYALDRDPGGSSSGSGAAAAANFAMAALGTDCGGSIRVPSSFDNLVGVRSTPGMISRKGAGTLVFFQDTIGPMARTVTDAAIVFDALVGYDAGD 654
            YL +I A D++GP+LN+++TTN  AL RA+ELD  +R T    GPLHG+ I+VKDNI+TA M TT G+  + G++P +DA  +  L  AGAVIL K+TLPDFATSWW+YSS+SGET+NPYALD DPGGSS+GS AA AAN A+A LGTDCGGS+R+P+SF NLVG+RSTPG++ R G G LV FQDT+GP+AR+V DA  +FDA+ GYD GD
Sbjct:   35 YLDQIEAIDRSGPSLNSIITTNDFALTRAEELDEHLRSTNTLAGPLHGVVIVVKDNIDTAEMDTTCGSEALLGFRPEKDAVAVARLREAGAVILSKSTLPDFATSWWSYSSVSGETKNPYALDHDPGGSSAGSAAAVAANLAVAGLGTDCGGSVRIPASFCNLVGIRSTPGVVPRTGTGFLVAFQDTVGPLARSVEDAVAIFDAMAGYDNGD 246          
BLAST of mRNA_M-pyrifera_M_contig102216.475.1 vs. uniprot
Match: A0A3A4F855_9MICC (Amidase n=1 Tax=Nesterenkonia natronophila TaxID=2174932 RepID=A0A3A4F855_9MICC)

HSP 1 Score: 273 bits (698), Expect = 1.550e-86
Identity = 130/218 (59.63%), Postives = 168/218 (77.06%), Query Frame = 1
Query:    1 RSLTEAYLARIAAYDQNGPTLNAVVTTNPQALARADELDAAMRETGGFVGPLHGIPILVKDNIETAAMPTTQGTIGMAGYQPREDASVIQHLESAGAVILGKTTLPDFATSWWAYSSLSGETRNPYALDRDPGGSSSGSGAAAAANFAMAALGTDCGGSIRVPSSFDNLVGVRSTPGMISRKGAGTLVFFQDTIGPMARTVTDAAIVFDALVGYDAGD 654
            R++ + YL RI   D++GP LN+++TTN  AL RA+ LD  +R+TG   GPLHG+ ++VKDNI+TA M TT G   + G++P +DA  +  L+ AGA+I+ K+ LPDFATSWW+YSS+SGET NPY LD DPGGSS+GS AA AAN A+A+LGTDCGGS+R+P+SF NLVG+RSTPG++ R G G LV FQDT+GPMAR+V DA  VFD + GYD GD
Sbjct:   28 RAVVQDYLKRIDEIDKSGPKLNSIITTNEVALHRAEGLDEHLRKTGELAGPLHGVVVVVKDNIDTADMDTTCGNEALLGFRPEQDAVAVARLQEAGAIIIAKSALPDFATSWWSYSSVSGETNNPYKLDHDPGGSSAGSAAAVAANLAVASLGTDCGGSVRIPASFCNLVGIRSTPGVVPRSGTGFLVAFQDTVGPMARSVEDAVTVFDVIAGYDKGD 245          
BLAST of mRNA_M-pyrifera_M_contig102216.475.1 vs. uniprot
Match: A0A5P9IMJ7_9GAMM (Glutamyl-tRNA(Gln) amidotransferase subunit A n=3 Tax=Halomonas TaxID=2745 RepID=A0A5P9IMJ7_9GAMM)

HSP 1 Score: 272 bits (696), Expect = 3.550e-86
Identity = 138/218 (63.30%), Postives = 165/218 (75.69%), Query Frame = 1
Query:    1 RSLTEAYLARIAAYDQNGPTLNAVVTTNPQALARADELDAAMRETGGFVGPLHGIPILVKDNIETAAMPTTQGTIGMAGYQPREDASVIQHLESAGAVILGKTTLPDFATSWWAYSSLSGETRNPYALDRDPGGSSSGSGAAAAANFAMAALGTDCGGSIRVPSSFDNLVGVRSTPGMISRKGAGTLVFFQDTIGPMARTVTDAAIVFDALVGYDAGD 654
            R LTEAYLAR+ A D+ GP LNA++T NP+AL  AD LDA    +G   GPLHG+P++VKD  ET  M TT G+I   GYQPR+DA+VI+ L++AGA+IL KT LPDFATSW+ + S  GETRNPY L  DPGGSSSG+ AA AAN A+  +G D GGSIR+P+SF NLVGVR TPG+ISR G   LV FQDT GPMARTVTDAA++ DA+VGYD  D
Sbjct:   28 RGLTEAYLARVEAIDKAGPGLNAIITVNPRALEEADRLDAEFAASGALSGPLHGVPVVVKDQAETKDMMTTFGSIAQDGYQPRDDATVIKKLKAAGAIILAKTALPDFATSWFGFCSRLGETRNPYVLAHDPGGSSSGTAAAVAANLALVGVGEDTGGSIRLPASFCNLVGVRVTPGLISRDGMSPLVVFQDTAGPMARTVTDAALLLDAMVGYDPKD 245          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102216.475.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E6HNK6_9GAMM2.350e-11377.27Amidase n=2 Tax=Gammaproteobacteria TaxID=1236 Rep... [more]
A0A523NZM0_9PROT1.050e-11178.18Amidase n=2 Tax=Proteobacteria bacterium TaxID=197... [more]
A0A7Y3H0W0_9DELT1.020e-9067.12Amidase n=1 Tax=Myxococcales bacterium TaxID=20267... [more]
UPI001A9E0A564.530e-9063.76amidase n=1 Tax=Rubrobacter marinus TaxID=2653852 ... [more]
UPI00166E8FEE1.330e-8864.52amidase n=1 Tax=Chelatococcus reniformis TaxID=149... [more]
A0A4U1LDV2_MICLU2.520e-8862.84Amidase n=1 Tax=Micrococcus luteus TaxID=1270 RepI... [more]
A0A6G8QD37_9ACTN3.300e-8864.68Amidase n=1 Tax=Rubrobacter tropicus TaxID=2653851... [more]
UPI001F4C709A7.110e-8862.74amidase n=2 Tax=Nesterenkonia TaxID=57494 RepID=UP... [more]
A0A3A4F855_9MICC1.550e-8659.63Amidase n=1 Tax=Nesterenkonia natronophila TaxID=2... [more]
A0A5P9IMJ7_9GAMM3.550e-8663.30Glutamyl-tRNA(Gln) amidotransferase subunit A n=3 ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig102216contigM-pyrifera_M_contig102216:3..662 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeArchaea
Seed ortholog score273.9
Seed ortholog evalue6.7e-71
Seed eggNOG ortholog751944.HALDL1_04305
Hectar predicted targeting categoryother localisation
EggNOG free text desc.COG0154 Asp-tRNAAsn Glu-tRNAGln amidotransferase A subunit and related amidases
EggNOG OGs23U3U@183963,2XV8T@28890,COG0154@1,arCOG01717@2157
COG Functional cat.J
Best tax levelHalobacteria
Best eggNOG OGNA|NA|NA
Exons1
Model size660
Cds size660
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815522.9628894-CDS-M-pyrifera_M_contig102216:2..6621622815522.9628894-CDS-M-pyrifera_M_contig102216:2..662Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig102216 3..662 -
1692277448.785839-CDS-M-pyrifera_M_contig102216:2..6621692277448.785839-CDS-M-pyrifera_M_contig102216:2..662Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig102216 3..662 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig102216.475.1prot_M-pyrifera_M_contig102216.475.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig102216 3..662 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig102216.475.1

>prot_M-pyrifera_M_contig102216.475.1 ID=prot_M-pyrifera_M_contig102216.475.1|Name=mRNA_M-pyrifera_M_contig102216.475.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=220bp
RSLTEAYLARIAAYDQNGPTLNAVVTTNPQALARADELDAAMRETGGFVG
PLHGIPILVKDNIETAAMPTTQGTIGMAGYQPREDASVIQHLESAGAVIL
GKTTLPDFATSWWAYSSLSGETRNPYALDRDPGGSSSGSGAAAAANFAMA
ALGTDCGGSIRVPSSFDNLVGVRSTPGMISRKGAGTLVFFQDTIGPMART
VTDAAIVFDALVGYDAGDTL
back to top

mRNA from alignment at M-pyrifera_M_contig102216:3..662-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig102216.475.1 ID=mRNA_M-pyrifera_M_contig102216.475.1|Name=mRNA_M-pyrifera_M_contig102216.475.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=660bp|location=Sequence derived from alignment at M-pyrifera_M_contig102216:3..662- (Macrocystis pyrifera P11B4 male)
CGCAGTCTTACCGAAGCTTATCTCGCACGAATCGCCGCCTATGATCAGAA CGGACCGACCCTGAATGCGGTTGTGACGACGAATCCGCAGGCGCTCGCCC GTGCCGATGAACTCGACGCAGCCATGCGTGAAACCGGTGGCTTCGTCGGC CCTCTGCACGGTATTCCGATACTCGTAAAAGACAATATCGAGACGGCCGC GATGCCGACGACGCAGGGTACGATCGGTATGGCTGGGTACCAGCCGCGGG AGGATGCGAGCGTTATCCAGCATCTCGAATCCGCAGGCGCGGTTATCCTC GGCAAGACGACCTTGCCCGATTTCGCAACGTCGTGGTGGGCGTATTCCTC GCTCAGCGGTGAGACGCGCAACCCCTACGCGCTCGATCGGGATCCGGGCG GGTCGAGCTCGGGCAGCGGCGCCGCGGCGGCAGCGAACTTTGCCATGGCG GCGCTCGGCACGGATTGCGGCGGCTCGATTCGGGTGCCGAGTTCTTTCGA TAATCTCGTGGGCGTACGTTCGACTCCGGGCATGATCAGTCGCAAGGGGG CCGGAACACTGGTGTTCTTTCAGGACACGATCGGTCCGATGGCGCGTACG GTAACGGACGCGGCGATCGTATTCGACGCACTCGTCGGATATGACGCGGG GGATACGCTG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig102216:3..662-

>mRNA_M-pyrifera_M_contig102216.475.1 ID=mRNA_M-pyrifera_M_contig102216.475.1|Name=mRNA_M-pyrifera_M_contig102216.475.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1320bp|location=Sequence derived from alignment at M-pyrifera_M_contig102216:3..662- (Macrocystis pyrifera P11B4 male)
CGCAGTCTTACCGAAGCTTATCTCGCACGAATCGCCGCCTATGATCAGAA
CGGACCGACCCTGAATGCGGTTGTGACGACGAATCCGCAGGCGCTCGCCC
GTGCCGATGAACTCGACGCAGCCATGCGTGAAACCGGTGGCTTCGTCGGC
CCTCTGCACGGTATTCCGATACTCGTAAAAGACAATATCGAGACGGCCGC
GATGCCGACGACGCAGGGTACGATCGGTATGGCTGGGTACCAGCCGCGGG
AGGATGCGAGCGTTATCCAGCATCTCGAATCCGCAGGCGCGGTTATCCTC
GGCAAGACGACCTTGCCCGATTTCGCAACGTCGTGGTGGGCGTATTCCTC
GCTCAGCGGTGAGACGCGCAACCCCTACGCGCTCGATCGGGATCCGGGCG
GGTCGAGCTCGGGCAGCGGCGCCGCGGCGGCAGCGAACTTTGCCATGGCG
GCGCTCGGCACGGATTGCGGCGGCTCGATTCGGGTGCCGAGTTCTTTCGA
TAATCTCGTGGGCGTACGTTCGACTCCGGGCATGATCAGTCGCAAGGGGG
CCGGAACACTGGTGTTCTTTCAGGACACGATCGGTCCGATGGCGCGTACG
GTAACGGACGCGGCGATCGTATTCGACGCACTCGTCGGATATGACGCGGG
GGATACGCTGCGCAGTCTTACCGAAGCTTATCTCGCACGAATCGCCGCCT
ATGATCAGAACGGACCGACCCTGAATGCGGTTGTGACGACGAATCCGCAG
GCGCTCGCCCGTGCCGATGAACTCGACGCAGCCATGCGTGAAACCGGTGG
CTTCGTCGGCCCTCTGCACGGTATTCCGATACTCGTAAAAGACAATATCG
AGACGGCCGCGATGCCGACGACGCAGGGTACGATCGGTATGGCTGGGTAC
CAGCCGCGGGAGGATGCGAGCGTTATCCAGCATCTCGAATCCGCAGGCGC
GGTTATCCTCGGCAAGACGACCTTGCCCGATTTCGCAACGTCGTGGTGGG
CGTATTCCTCGCTCAGCGGTGAGACGCGCAACCCCTACGCGCTCGATCGG
GATCCGGGCGGGTCGAGCTCGGGCAGCGGCGCCGCGGCGGCAGCGAACTT
TGCCATGGCGGCGCTCGGCACGGATTGCGGCGGCTCGATTCGGGTGCCGA
GTTCTTTCGATAATCTCGTGGGCGTACGTTCGACTCCGGGCATGATCAGT
CGCAAGGGGGCCGGAACACTGGTGTTCTTTCAGGACACGATCGGTCCGAT
GGCGCGTACGGTAACGGACGCGGCGATCGTATTCGACGCACTCGTCGGAT
ATGACGCGGGGGATACGCTG
back to top