mRNA_M-pyrifera_M_contig102144.464.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig102144.464.1 vs. uniprot
Match: A0A2E7KJX5_9PLAN (Uncharacterized protein n=6 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KJX5_9PLAN) HSP 1 Score: 352 bits (902), Expect = 3.490e-118 Identity = 180/194 (92.78%), Postives = 188/194 (96.91%), Query Frame = 1 Query: 1 GRQTNTGTPAVSGKRTVGQMVSQPKLKSENGSVQFEGLIESLSQSAEKGAPDTQDVGKAVKRLENSLSSQQLEDSAGMNSIPDSYRKFIPVPRSPLTPGTTDKGTRTGHSLSQVQPENVDEIVEDLFESLPDASKNSTQGEQAKTYVIQKGDTLESIALRIYGKRSAAFQIYQKNRDLLKNANYIMPGMRLQLP 582 GRQTNTGTPAVSGKRT+GQMVSQPKLKSENGSVQFEGLIESLSQS EK PD Q+VGKAV++LE SLSSQQLEDSAGMNSIPDSYRKFIPVPRSPLTPGTTDKGTRTGHSLSQVQPENVDEI+EDLF+ LPDASK+STQGEQAKTYVIQKGDTLESIALRIYGKRSAAFQIYQKNRDLLKNANYIMPGM+LQLP Sbjct: 266 GRQTNTGTPAVSGKRTMGQMVSQPKLKSENGSVQFEGLIESLSQSTEKRTPDAQNVGKAVQQLEKSLSSQQLEDSAGMNSIPDSYRKFIPVPRSPLTPGTTDKGTRTGHSLSQVQPENVDEILEDLFDRLPDASKSSTQGEQAKTYVIQKGDTLESIALRIYGKRSAAFQIYQKNRDLLKNANYIMPGMKLQLP 459
BLAST of mRNA_M-pyrifera_M_contig102144.464.1 vs. uniprot
Match: A0A518A5E3_9PLAN (LysM domain/BON superfamily protein n=3 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A5E3_9PLAN) HSP 1 Score: 274 bits (701), Expect = 5.640e-88 Identity = 147/194 (75.77%), Postives = 161/194 (82.99%), Query Frame = 1 Query: 1 GRQTNTGTPAVSGKRTVGQMVSQPKLKSENGSVQFEGLIESLSQSAEKGAPDTQDVGKAVKRLENSLSSQQLEDSAGMNSIPDSYRKFIPVPRSPLTPGTTDKGTRTGHSLSQVQPENVDEIVEDLFESLPDASKNSTQGEQAKTYVIQKGDTLESIALRIYGKRSAAFQIYQKNRDLLKNANYIMPGMRLQLP 582 GRQTNTGTPAVSGKRTVGQMVSQP LKS++ SVQFEGLIESLSQ+ EK +QD QL++SAG+ SIP+SYRKFIPVPRSPLTPG+ +G ++G SLSQVQPENVDEIVEDLF+ LPDASK S EQAKTYVIQKGDTLESIALRIYGKRSAAFQIYQKNRDLLKNANYI PGM+LQLP Sbjct: 268 GRQTNTGTPAVSGKRTVGQMVSQPTLKSDSASVQFEGLIESLSQTPEKTPAGSQD---------------QLKNSAGIGSIPESYRKFIPVPRSPLTPGSQSQGGKSGQSLSQVQPENVDEIVEDLFDRLPDASKQSQTVEQAKTYVIQKGDTLESIALRIYGKRSAAFQIYQKNRDLLKNANYIRPGMKLQLP 446
BLAST of mRNA_M-pyrifera_M_contig102144.464.1 vs. uniprot
Match: A0A517REM1_9PLAN (LysM domain/BON superfamily protein n=1 Tax=Gimesia alba TaxID=2527973 RepID=A0A517REM1_9PLAN) HSP 1 Score: 215 bits (548), Expect = 6.950e-65 Identity = 118/195 (60.51%), Postives = 148/195 (75.90%), Query Frame = 1 Query: 7 QTNTGTPAVSGKRTVGQMVSQPKLKSENGSVQFEGLIESLSQSAEKGAPDTQDVGKAVKRLENSLSSQQLEDSA-GMNSIPDSYRKFIPVPRSPLTP--GTTDKGTRTGHSLSQVQPENVDEIVEDLFESLPDASKNSTQGEQAKTYVIQKGDTLESIALRIYGKRSAAFQIYQKNRDLLKNANYIMPGMRLQLP 582 Q++TG+ A +GKRT+GQMVSQP LKS + SVQFEGLIESLS S+ + D K V+ LE +L S L D G + IP +YRKFIPVPRSPLTP G+ + G SLSQVQP+NVD+IVE+LF+ L D+ + + +AKTY I+KGDTLESIA+RIYGKRSAAF+IYQKNRD+LK+A+YI PGM+L+LP Sbjct: 263 QSSTGSTARAGKRTIGQMVSQPTLKSGSSSVQFEGLIESLSNSSNPSSLKDLDHKKTVQELEKTLKSGNLLDGKNGTSGIPKNYRKFIPVPRSPLTPQAGSQARTPGAGKSLSQVQPDNVDQIVEELFDKLEDSPQQTKGTAKAKTYTIKKGDTLESIAVRIYGKRSAAFKIYQKNRDMLKSAHYIRPGMKLELP 457
BLAST of mRNA_M-pyrifera_M_contig102144.464.1 vs. uniprot
Match: A0A517V915_9PLAN (LysM domain/BON superfamily protein n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517V915_9PLAN) HSP 1 Score: 210 bits (534), Expect = 8.130e-63 Identity = 117/199 (58.79%), Postives = 148/199 (74.37%), Query Frame = 1 Query: 4 RQTNTGTPAVSGKRTVGQMVSQPKLKSENGS--VQFEGLIESLSQSAEKGAPDTQDVGKAVKRLENSLSSQQLEDSAGMNSIPDSYRKFIPVPRSPLTPG----TTDKGTRTGHSLSQVQPENVDEIVEDLFESLPDASKNSTQGEQAKTYVIQKGDTLESIALRIYGKRSAAFQIYQKNRDLLKNANYIMPGMRLQLP 582 RQTN +P ++GKRT+GQMVSQP LKS+ S VQFEGLIESLS + + + D + ++ LE S+ +++L AG+ IP++YRKFIPVPRSPLTPG + + +G SLSQVQPENVD+IV+DLF +++ + Q Q KTY IQ GDTLESIA+RIYGKRSAAF+IYQ+NRDLLKNANYI PGM+L LP Sbjct: 261 RQTNVQSPVMTGKRTMGQMVSQPTLKSDTSSSTVQFEGLIESLSNTPSQKSMGQLDQKQVMQELEESIQTEKLP--AGIKQIPENYRKFIPVPRSPLTPGNGSQSNGSSSGSGRSLSQVQPENVDQIVDDLFGEQTEST--TQQPAQPKTYTIQAGDTLESIAVRIYGKRSAAFKIYQQNRDLLKNANYIRPGMKLNLP 455
BLAST of mRNA_M-pyrifera_M_contig102144.464.1 vs. uniprot
Match: A0A517VYK1_9PLAN (LysM domain/BON superfamily protein n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VYK1_9PLAN) HSP 1 Score: 207 bits (526), Expect = 1.240e-61 Identity = 114/197 (57.87%), Postives = 141/197 (71.57%), Query Frame = 1 Query: 7 QTNTGTPAVSGKRTVGQMVSQPKLKSENGSVQFEGLIESLSQSAEKGAPDTQDVGKAVKRLENSLSSQQLEDSAGMN-SIPDSYRKFIPVPRSPLTPGTTDKG----TRTGHSLSQVQPENVDEIVEDLFESLPDASKNSTQGEQAKTYVIQKGDTLESIALRIYGKRSAAFQIYQKNRDLLKNANYIMPGMRLQLP 582 QT GT A +GKRT+GQMVSQP LK + SVQFEGLIESLS S K D K +KRLE++L S + + +IPD+YRKFIPVPRSPLTP T+ + T+ G SLSQVQPENV +I++ +F+ P+ K + + TY I+KGDTLESIALR+YGKRSAAFQIY KN++ LKNA+YI PGM+LQLP Sbjct: 258 QTFNGTSAKAGKRTIGQMVSQPTLKQGSSSVQFEGLIESLSNSQNKNTLKDLDHKKNLKRLEDTLKSDKFGGNLQRTKTIPDNYRKFIPVPRSPLTPRTSSRNSKQETKLGQSLSQVQPENVKQIIDGVFDESPEKKKQTGNRVNSYTYTIKKGDTLESIALRLYGKRSAAFQIYLKNKEKLKNADYIRPGMKLQLP 454
BLAST of mRNA_M-pyrifera_M_contig102144.464.1 vs. uniprot
Match: A6CBJ5_9PLAN (Uncharacterized protein n=6 Tax=Planctomycetaceae TaxID=126 RepID=A6CBJ5_9PLAN) HSP 1 Score: 204 bits (519), Expect = 1.210e-60 Identity = 115/195 (58.97%), Postives = 143/195 (73.33%), Query Frame = 1 Query: 4 RQTNTGTPAVSGKRTVGQMVSQPKLKSENGS--VQFEGLIESLSQSAEKGAPDTQDVGKAVKRLENSLSSQQLEDSAGMNSIPDSYRKFIPVPRSPLTPGTTDKGTRTGHSLSQVQPENVDEIVEDLFESLPDASKNSTQGEQAKTYVIQKGDTLESIALRIYGKRSAAFQIYQKNRDLLKNANYIMPGMRLQLP 582 RQTN +P ++GKRT+GQMVSQP LKS+ S VQFEGLIESLS + K D + ++ LE S+ +++L AG+ +PD+YRKFIPVPRSP T + +G SLSQVQPENVD+IV+DLF + ++ ++Q Q KTY IQ GDTLESIAL IYGKRS AF+IYQ+NRDLLKNANYI PGM+LQLP Sbjct: 261 RQTNVESPVMTGKRTMGQMVSQPTLKSDAASSTVQFEGLIESLSTAPSKKTMGQLDQQEMIQELEESVQTEKLP--AGIKKVPDNYRKFIPVPRSPFT-HNNGATSGSGRSLSQVQPENVDQIVDDLF---GEQTEPASQTAQPKTYTIQPGDTLESIALEIYGKRSVAFKIYQQNRDLLKNANYIRPGMKLQLP 449
BLAST of mRNA_M-pyrifera_M_contig102144.464.1 vs. uniprot
Match: A0A518IBF0_9PLAN (LysM domain/BON superfamily protein n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518IBF0_9PLAN) HSP 1 Score: 202 bits (515), Expect = 5.910e-60 Identity = 112/195 (57.44%), Postives = 142/195 (72.82%), Query Frame = 1 Query: 7 QTNTGTPAVSGKRTVGQMVSQPKLKSENGSVQFEGLIESLSQSAEKGAPDTQDVGKAVKRLENSLSSQQLEDSA-GMNSIPDSYRKFIPVPRSPLTP--GTTDKGTRTGHSLSQVQPENVDEIVEDLFESLPDASKNSTQGEQAKTYVIQKGDTLESIALRIYGKRSAAFQIYQKNRDLLKNANYIMPGMRLQLP 582 Q++T T A SGKRT+GQMVSQP LK + +VQFEGLIESLS + ++ + D + +++L+ +L S L D G N+IP +YRKFIPVPRSPLTP G+ + G SLSQVQPENVDEI D+ + S + + KTY I+KGDTLESIA+RIYGKRSAAF+IYQKNRDLLK+A+YI PGM+L+LP Sbjct: 264 QSSTATSARSGKRTIGQMVSQPTLKKGSSTVQFEGLIESLSNAPDQSSLKDLDQQQTMQQLQKTLKSGTLTDGKNGTNAIPKNYRKFIPVPRSPLTPQAGSQARTQGAGKSLSQVQPENVDEIXXXXXXXXSDSPQQSNKTAKLKTYTIKKGDTLESIAVRIYGKRSAAFKIYQKNRDLLKSAHYIRPGMKLELP 458
BLAST of mRNA_M-pyrifera_M_contig102144.464.1 vs. uniprot
Match: A0A2E2CA48_9PLAN (Uncharacterized protein n=3 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2CA48_9PLAN) HSP 1 Score: 200 bits (509), Expect = 4.110e-59 Identity = 111/198 (56.06%), Postives = 147/198 (74.24%), Query Frame = 1 Query: 4 RQTNTGTPAVSGKRTVGQMVSQPKLKSE--NGSVQFEGLIESLSQSAEKGAPDTQDVGKAVKRLENSLSSQQLEDSAGMNSIPDSYRKFIPVPRSPLTPGTTDKGTRT---GHSLSQVQPENVDEIVEDLFESLPDASKNSTQGEQAKTYVIQKGDTLESIALRIYGKRSAAFQIYQKNRDLLKNANYIMPGMRLQLP 582 RQTN +P ++GKRT+GQMVSQP LKS+ + +VQFEGLIESLS + + + D + ++ L+ S+ +++L AG+ IP++YRKFIPVPRSP T + + T+ G SLSQVQPENV++IV+DLF +++ +T+ KTY IQ+GDTLESIA+RIYGKRSAAF+IYQ NRDLLKNANYI PGM+L LP Sbjct: 261 RQTNVESPVMTGKRTMGQMVSQPTLKSDPPSSTVQFEGLIESLSDAPSQKSMGQLDQKQMMQELKESIPNEKLP--AGVKGIPENYRKFIPVPRSPFTHNNSSQTTQANGPGRSLSQVQPENVEQIVDDLFGEKTESTSPTTK---PKTYTIQQGDTLESIAVRIYGKRSAAFEIYQHNRDLLKNANYIRPGMKLNLP 453
BLAST of mRNA_M-pyrifera_M_contig102144.464.1 vs. uniprot
Match: A0A0J6IHM1_9PSED (Peptidoglycan-binding protein LysM n=8 Tax=Pseudomonas TaxID=286 RepID=A0A0J6IHM1_9PSED) HSP 1 Score: 56.6 bits (135), Expect = 7.270e-7 Identity = 34/97 (35.05%), Postives = 52/97 (53.61%), Query Frame = 1 Query: 304 DKGTRTGHSLSQVQPENVDEIVEDLFESLPDASKNSTQGEQA----KTYVIQKGDTLESIALRIYGKRSAAFQIYQKNRDLLKNANYIMPGMRLQLP 582 DK T TG + SQ + E + + E + T A + V+QKGDTL +I+LR+YG + +I++ N+ LLK+ N I PG L++P Sbjct: 50 DKITLTGEAASQEEKEKI-VLAAGNIEGVASVDDQITVTGPAVVASRFVVVQKGDTLSAISLRVYGNANQYNKIFEANKPLLKDVNKIYPGQTLRIP 145
BLAST of mRNA_M-pyrifera_M_contig102144.464.1 vs. uniprot
Match: A0A562C0E7_9GAMM (LysM domain-containing protein n=1 Tax=Luteimonas sp. J16 TaxID=935283 RepID=A0A562C0E7_9GAMM) HSP 1 Score: 55.1 bits (131), Expect = 1.690e-6 Identity = 25/52 (48.08%), Postives = 35/52 (67.31%), Query Frame = 1 Query: 427 AKTYVIQKGDTLESIALRIYGKRSAAFQIYQKNRDLLKNANYIMPGMRLQLP 582 A++Y I+KGDTL +IA R+YGK S +I+ NRD + N + I PG + LP Sbjct: 55 ARSYTIEKGDTLSAIAKRVYGKASYWQRIFDANRDTIDNPDRIFPGQVITLP 106 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102144.464.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig102144.464.1 >prot_M-pyrifera_M_contig102144.464.1 ID=prot_M-pyrifera_M_contig102144.464.1|Name=mRNA_M-pyrifera_M_contig102144.464.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=195bp GRQTNTGTPAVSGKRTVGQMVSQPKLKSENGSVQFEGLIESLSQSAEKGAback to top mRNA from alignment at M-pyrifera_M_contig102144:3..587+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig102144.464.1 ID=mRNA_M-pyrifera_M_contig102144.464.1|Name=mRNA_M-pyrifera_M_contig102144.464.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=585bp|location=Sequence derived from alignment at M-pyrifera_M_contig102144:3..587+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig102144:3..587+ >mRNA_M-pyrifera_M_contig102144.464.1 ID=mRNA_M-pyrifera_M_contig102144.464.1|Name=mRNA_M-pyrifera_M_contig102144.464.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1170bp|location=Sequence derived from alignment at M-pyrifera_M_contig102144:3..587+ (Macrocystis pyrifera P11B4 male)back to top |