mRNA_M-pyrifera_M_contig102133.462.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig102133.462.1 vs. uniprot
Match: A0A517PU42_9PLAN (Large cysteine-rich periplasmic protein OmcB n=4 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A517PU42_9PLAN) HSP 1 Score: 274 bits (701), Expect = 4.910e-88 Identity = 147/156 (94.23%), Postives = 147/156 (94.23%), Query Frame = 1 Query: 1 MPGIVNRPILRMTSGMLLVLTLSLTACTAFAPSQRASWKLTDPPPLDPQNQPLNSPQPATPNTQSRETQRIGPQQTIPQKQEPPAPPDNDMFAVPESIDRNQPPQPRDLPEEIPSRPRVETPQPQMRSKXXXXXXXXSGPMMTPPAQVGPLEMTVD 468 MPGIVNRPILRMTSGMLLVLTLSLTACTAFAPSQRASWKLTDPPPLDPQNQPLNSPQPATPNTQSRETQRIGPQQTIPQKQEPPAPPDNDMFAVPESIDRNQPPQP DLPEEIPSRPRVETPQPQMRSK SGPMMTPPAQVGPLEMTVD Sbjct: 1 MPGIVNRPILRMTSGMLLVLTLSLTACTAFAPSQRASWKLTDPPPLDPQNQPLNSPQPATPNTQSRETQRIGPQQTIPQKQEPPAPPDNDMFAVPESIDRNQPPQPCDLPEEIPSRPRVETPQPQMRSKPETTPQRPSGPMMTPPAQVGPLEMTVD 156
BLAST of mRNA_M-pyrifera_M_contig102133.462.1 vs. uniprot
Match: A0A2E7K5T2_9PLAN (DUF11 domain-containing protein n=9 Tax=Gimesia TaxID=1649453 RepID=A0A2E7K5T2_9PLAN) HSP 1 Score: 249 bits (636), Expect = 1.920e-78 Identity = 140/141 (99.29%), Postives = 140/141 (99.29%), Query Frame = 1 Query: 46 MLLVLTLSLTACTAFAPSQRASWKLTDPPPLDPQNQPLNSPQPATPNTQSRETQRIGPQQTIPQKQEPPAPPDNDMFAVPESIDRNQPPQPRDLPEEIPSRPRVETPQPQMRSKXXXXXXXXSGPMMTPPAQVGPLEMTVD 468 MLLVLTLSLTACTAFAPSQRASWKLTDPPPLDPQNQPLNSPQPATPNTQSRETQRIGPQQTIPQKQEPPAPPDNDMFAVPESIDRNQPPQPRDLPEEIPSRPRVETPQPQMRSK XXXXXXXSGPMMTPPAQVGPLEMTVD Sbjct: 1 MLLVLTLSLTACTAFAPSQRASWKLTDPPPLDPQNQPLNSPQPATPNTQSRETQRIGPQQTIPQKQEPPAPPDNDMFAVPESIDRNQPPQPRDLPEEIPSRPRVETPQPQMRSKPXXXXXXXSGPMMTPPAQVGPLEMTVD 141
BLAST of mRNA_M-pyrifera_M_contig102133.462.1 vs. uniprot
Match: A0A517VSZ0_9PLAN (Large cysteine-rich periplasmic protein OmcB n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VSZ0_9PLAN) HSP 1 Score: 123 bits (309), Expect = 3.340e-30 Identity = 86/159 (54.09%), Postives = 112/159 (70.44%), Query Frame = 1 Query: 1 MPGIVNRPILRMTSGMLLV--LTLSLTACTAFAPSQRASWKLTDPPPLDPQNQPLNSPQPATPNTQSRETQRIGPQQTIPQKQEPPAPPDNDMFAVPESIDRNQPPQPRDLPEEIPSRPRVETPQPQMRS-KXXXXXXXXSGPMMTPPAQVGPLEMTVD 468 MPG RP + +GMLL+ LT++++AC++ AP QR+SWKL++PPPLDPQN+ L +P P QSRETQR+ P+ TI QKQ + P D+FAVPES++RN PPQPRDLPE I RP ++ P +S + XXXXXXX MT PA GPLE++VD Sbjct: 1 MPGSQIRPFSKFAAGMLLLSMLTVAVSACSSLAPGQRSSWKLSNPPPLDPQNESLENPS-QNPTPQSRETQRVNPE-TIRQKQPQNSQPQKDLFAVPESVNRNLPPQPRDLPERISPRPELKRPDYLKKSPQSXXXXXXXXXXXMTAPATTGPLELSVD 157
BLAST of mRNA_M-pyrifera_M_contig102133.462.1 vs. uniprot
Match: A0A350K5V3_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A350K5V3_9PLAN) HSP 1 Score: 115 bits (287), Expect = 3.330e-29 Identity = 80/169 (47.34%), Postives = 93/169 (55.03%), Query Frame = 1 Query: 1 MPGIVNRPILRMTSGMLLVLTLSLTACTAFAPSQRASWKLTDPPPLDPQNQPLNSPQPATPNTQSRETQRIGP-------------QQTIPQKQEPPAPPDNDMFAVPESIDRNQPPQPRDLPEEIPSRPRVETPQPQMRSKXXXXXXXXSGPMMTPPAQVGPLEMTVD 468 MPG RP + S +LL+LTLS AC+A APSQR+SWKLTDPPPLDPQNQ Q T PQ +E D+FAVPES+ +NQPPQPRDLPE++ RP++ P Q RSK SGPMMT PA GPLEMT D Sbjct: 1 MPGSRIRPSSGVISFLLLLLTLSTAACSALAPSQRSSWKLTDPPPLDPQNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQPTSPQPKE-------DLFAVPESLKQNQPPQPRDLPEQVMPRPQLNAPDIQSRSKPEPLSKQPSGPMMTAPATAGPLEMTAD 162
BLAST of mRNA_M-pyrifera_M_contig102133.462.1 vs. uniprot
Match: A0A517VIW8_9PLAN (Large cysteine-rich periplasmic protein OmcB n=5 Tax=Gimesia TaxID=1649453 RepID=A0A517VIW8_9PLAN) HSP 1 Score: 119 bits (299), Expect = 8.420e-29 Identity = 81/156 (51.92%), Postives = 93/156 (59.62%), Query Frame = 1 Query: 1 MPGIVNRPILRMTSGMLLVLTLSLTACTAFAPSQRASWKLTDPPPLDPQNQPLNSPQPATPNTQSRETQRIGPQQTIPQKQEPPAPPDNDMFAVPESIDRNQPPQPRDLPEEIPSRPRVETPQPQMRSKXXXXXXXXSGPMMTPPAQVGPLEMTVD 468 MPG RP+ S +LL+LTLS AC+A APSQR+SWKLTDPPPLDPQNQPLNSP RETQR+ PQ TIPQ+Q QPRDLP+++ RP++ P Q RSK SGPMMT PA GPLEMTVD Sbjct: 1 MPGSRIRPLSGAVSILLLLLTLSTAACSALAPSQRSSWKLTDPPPLDPQNQPLNSPVXXX-XXXXRETQRVNPQ-TIPQRQPTAXXXXXXXXXXXXXXXXXXXXQPRDLPDQVMPRPQLRAPDIQSRSKPESLPKQPSGPMMTAPATAGPLEMTVD 154
BLAST of mRNA_M-pyrifera_M_contig102133.462.1 vs. uniprot
Match: A0A2D5GTV7_9PLAN (Uncharacterized protein (Fragment) n=2 Tax=Gimesia TaxID=1649453 RepID=A0A2D5GTV7_9PLAN) HSP 1 Score: 108 bits (270), Expect = 2.380e-27 Identity = 72/150 (48.00%), Postives = 83/150 (55.33%), Query Frame = 1 Query: 58 LTLSLTACTAFAPSQRASWKLTDPPPLDPQNQPLNSPQPATPNTQSRETQRIGP-------------QQTIPQKQEPPAPPDNDMFAVPESIDRNQPPQPRDLPEEIPSRPRVETPQPQMRSKXXXXXXXXSGPMMTPPAQVGPLEMTVD 468 +TLS AC+A APSQR+SWKLTDPPPLDPQNQ Q T PQ P+ D+FAVPES+ +NQPPQPRDLPE++ RP++ P Q RSK SGPMMT PA GPLEMTVD Sbjct: 1 MTLSTAACSALAPSQRSSWKLTDPPPLDPQNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQPTSPQ-------PNEDLFAVPESLKQNQPPQPRDLPEQVMPRPQLNAPDIQSRSKPEPLSKQPSGPMMTAPATAGPLEMTVD 143
BLAST of mRNA_M-pyrifera_M_contig102133.462.1 vs. uniprot
Match: A0A517RKK1_9PLAN (Large cysteine-rich periplasmic protein OmcB n=4 Tax=Gimesia TaxID=1649453 RepID=A0A517RKK1_9PLAN) HSP 1 Score: 110 bits (276), Expect = 1.450e-25 Identity = 75/157 (47.77%), Postives = 93/157 (59.24%), Query Frame = 1 Query: 1 MPGIVNRPILRMTSGMLLVLTLSLTACTAFAPSQRASWKLTDPPPLDPQNQPLNSP-QPATPNTQSRETQRIGPQQTIPQKQEPPAPPDNDMFAVPESIDRNQPPQPRDLPEEIPSRPRVETPQPQMRSKXXXXXXXXSGPMMTPPAQVGPLEMTVD 468 MPG RP R S MLL+LTL++TAC+A AP R+SWKLTDPPPL+PQNQ L P + P ++ RETQRI P+ TIPQ+ PQP+DLPEEI +PR+ P Q R + SGPMMT P+ GPLEM+V+ Sbjct: 1 MPGSGIRPFSRSVSVMLLLLTLAVTACSALAPGSRSSWKLTDPPPLNPQNQSLQKPTETQPPQSKPRETQRIAPE-TIPQRXXXXXXXXXXXXXXXXXXXXXXXPQPQDLPEEIKPQPRLNVPDLQSRMQPKSAPKRQSGPMMTAPSASGPLEMSVE 156
BLAST of mRNA_M-pyrifera_M_contig102133.462.1 vs. uniprot
Match: A0A3C0AEI8_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3C0AEI8_9PLAN) HSP 1 Score: 93.2 bits (230), Expect = 9.000e-20 Identity = 67/158 (42.41%), Postives = 84/158 (53.16%), Query Frame = 1 Query: 46 MLLVLTLSLTACTAFAPSQRASWKLTDPPPLDPQNQPLNSPQPATPNTQSRETQRIGP-----------------QQTIPQKQEPPAPPDNDMFAVPESIDRNQPPQPRDLPEEIPSRPRVETPQPQMRSKXXXXXXXXSGPMMTPPAQVGPLEMTVD 468 MLL+LTLS AC+ APSQR+SWKLTDPP LDPQNQ Q +PQ +E D+FAVPES+++NQPPQ R+LP++ +RP++ P Q RS+ +GP MT PA GPLEMTVD Sbjct: 1 MLLLLTLSTAACSTLAPSQRSSWKLTDPPTLDPQNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQPGVPQPRE-------DLFAVPESLNQNQPPQLRNLPDQDMTRPQLNAPDLQSRSQPDTIIQQPTGPRMTAPATAGPLEMTVD 151
BLAST of mRNA_M-pyrifera_M_contig102133.462.1 vs. uniprot
Match: A0A2E2C461_9PLAN (DUF11 domain-containing protein n=4 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2C461_9PLAN) HSP 1 Score: 93.2 bits (230), Expect = 3.190e-19 Identity = 67/158 (42.41%), Postives = 84/158 (53.16%), Query Frame = 1 Query: 46 MLLVLTLSLTACTAFAPSQRASWKLTDPPPLDPQNQPLNSPQPATPNTQSRETQRIGP-----------------QQTIPQKQEPPAPPDNDMFAVPESIDRNQPPQPRDLPEEIPSRPRVETPQPQMRSKXXXXXXXXSGPMMTPPAQVGPLEMTVD 468 MLL+LTLS AC+ APSQR+SWKLTDPP LDPQNQ Q +PQ +E D+FAVPES+++NQPPQ R+LP++ +RP++ P Q RS+ +GP MT PA GPLEMTVD Sbjct: 1 MLLLLTLSTAACSTLAPSQRSSWKLTDPPTLDPQNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQPGVPQPRE-------DLFAVPESLNQNQPPQLRNLPDQDMTRPQLNAPDLQSRSQPDTIIQQPTGPRMTAPATAGPLEMTVD 151 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102133.462.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig102133.462.1 >prot_M-pyrifera_M_contig102133.462.1 ID=prot_M-pyrifera_M_contig102133.462.1|Name=mRNA_M-pyrifera_M_contig102133.462.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=156bp MPGIVNRPILRMTSGMLLVLTLSLTACTAFAPSQRASWKLTDPPPLDPQNback to top mRNA from alignment at M-pyrifera_M_contig102133:2..469- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig102133.462.1 ID=mRNA_M-pyrifera_M_contig102133.462.1|Name=mRNA_M-pyrifera_M_contig102133.462.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=468bp|location=Sequence derived from alignment at M-pyrifera_M_contig102133:2..469- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig102133:2..469- >mRNA_M-pyrifera_M_contig102133.462.1 ID=mRNA_M-pyrifera_M_contig102133.462.1|Name=mRNA_M-pyrifera_M_contig102133.462.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=936bp|location=Sequence derived from alignment at M-pyrifera_M_contig102133:2..469- (Macrocystis pyrifera P11B4 male)back to top |