mRNA_M-pyrifera_M_contig102128.459.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig102128.459.1 vs. uniprot
Match: A0A812UZ52_SYMMI (Ddx10 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UZ52_SYMMI) HSP 1 Score: 182 bits (463), Expect = 4.430e-56 Identity = 95/156 (60.90%), Postives = 120/156 (76.92%), Query Frame = 1 Query: 1 GLERSGFTKLTEVQRAAIPHALVGRDVLGAAKTGSGKTLAFLVPVLERMFRSRRTGGDGLGALIISPTRELARQIMDVLRRVGKMHKGIVGGVVTGGV-HFEREKREVGGLTVLVGTPGRLLQHFEQSPDLDLTSLEMLVLDEADRLLDMGFRAQL 465 GL ++G + T++Q AA+PHAL GRDVLGAAKTGSGKTL+F++PVLE ++R R GDGL A+II+PTRELA QI DVLR G+ H+ I G+VTGG FE E+ + + +LV TPGRLLQHFEQ+P D ++L LVLDEADR+LDMGF+ QL Sbjct: 3 GLVKAGISVPTDIQAAALPHALCGRDVLGAAKTGSGKTLSFVIPVLELLYRERWGLGDGLAAIIITPTRELALQIFDVLRTTGRKHQ-ISAGLVTGGKKEFEEEQERIVKMNILVATPGRLLQHFEQTPGFDCSNLLALVLDEADRILDMGFKHQL 157
BLAST of mRNA_M-pyrifera_M_contig102128.459.1 vs. uniprot
Match: A0A5A8DZA9_CAFRO (Uncharacterized protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DZA9_CAFRO) HSP 1 Score: 193 bits (490), Expect = 9.750e-55 Identity = 97/150 (64.67%), Postives = 118/150 (78.67%), Query Frame = 1 Query: 4 LERSGFTKLTEVQRAAIPHALVGRDVLGAAKTGSGKTLAFLVPVLERMFRSRRTGGDGLGALIISPTRELARQIMDVLRRVGKMHKGIVGGVVTGGVHFEREKREVGGLTVLVGTPGRLLQHFEQSPDLDLTSLEMLVLDEADRLLDMGF 453 L + +TKLT+VQRAA+PHAL GRDVLGAAKTGSGKTLAFLVP++E +FR R + DG+GA+II+PTRELA QIM LRR+G H + G++ GG F E+ +G L+V+V TPGRL QH EQSP+LD +SL LVLDEADRLLDMGF Sbjct: 28 LTSNKWTKLTDVQRAAVPHALAGRDVLGAAKTGSGKTLAFLVPIVELLFRERWSAEDGVGAIIITPTRELALQIMQALRRLGTRHPDLTAGLLCGGKAFSEEQAVLGRLSVVVATPGRLQQHLEQSPELDTSSLRALVLDEADRLLDMGF 177
BLAST of mRNA_M-pyrifera_M_contig102128.459.1 vs. uniprot
Match: A0A2R5GJM3_9STRA (ATP-dependent RNA helicase dbp4 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GJM3_9STRA) HSP 1 Score: 193 bits (491), Expect = 1.680e-54 Identity = 100/156 (64.10%), Postives = 122/156 (78.21%), Query Frame = 1 Query: 1 GLERSGFTKLTEVQRAAIPHALVGRDVLGAAKTGSGKTLAFLVPVLERMFRSRRTGGDGLGALIISPTRELARQIMDVLRRVGKMHKGIVGGVVTGGVHFEREKREVGGLTVLVGTPGRLLQHFEQSPDLDLTSLEMLVLDEADRLLDMGFRAQLS 468 GLER F +T++Q+ AIPHALVGRDVLGAA+TGSGKTLAF+VP+LER+FR T G GLGA+IISPTRELA QI +VLR VG H G G+V GG F RE+ V L V++ TPGRLLQH EQ+P +D + ++MLVLDEADRLLD+GF+ QL+ Sbjct: 106 GLERGKFVTMTKIQQLAIPHALVGRDVLGAARTGSGKTLAFVVPLLERLFRLGWTPGLGLGAVIISPTRELALQIYEVLRVVGYRH-GYTAGIVMGGSDFRREQANVHQLAVMIATPGRLLQHLEQTPTMDASQVQMLVLDEADRLLDLGFKKQLT 260
BLAST of mRNA_M-pyrifera_M_contig102128.459.1 vs. uniprot
Match: F0Y9C4_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9C4_AURAN) HSP 1 Score: 186 bits (472), Expect = 5.240e-54 Identity = 95/154 (61.69%), Postives = 112/154 (72.73%), Query Frame = 1 Query: 1 GLERSGFTKLTEVQRAAIPHALVGRDVLGAAKTGSGKTLAFLVPVLERMFRSRRTGGDGLGALIISPTRELARQIMDVLRRVGKMHKGIVGGVVTGGVHFEREKREVGGLTVLVGTPGRLLQHFEQSPDLDLTSLEMLVLDEADRLLDMGFRAQ 462 GL GF + +QR AIPHAL GRDVLGAA+TGSGKTLAFLVP LE ++R R + GDGLGALIISPTRELA QI DVLR+ G H G + GG F+ E+ VG + +LV TPGR+LQH E+SP D T L LV+DEADR++DMGF AQ Sbjct: 47 GLTSGGFETMKPIQRCAIPHALAGRDVLGAARTGSGKTLAFLVPALEALYRHRWSAGDGLGALIISPTRELAAQIFDVLRKAGSCHDVSAGLITGGGRDFDAERDRVGRMCLLVATPGRVLQHAEESPAFDATGLLALVVDEADRVVDMGFAAQ 200
BLAST of mRNA_M-pyrifera_M_contig102128.459.1 vs. uniprot
Match: A0A024GKP7_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GKP7_9STRA) HSP 1 Score: 192 bits (488), Expect = 5.610e-54 Identity = 93/156 (59.62%), Postives = 125/156 (80.13%), Query Frame = 1 Query: 1 GLERSGFTKLTEVQRAAIPHALVGRDVLGAAKTGSGKTLAFLVPVLERMFRSRRTGGDGLGALIISPTRELARQIMDVLRRVGKMHKGIVGGVVTGGVHFEREKREVGGLTVLVGTPGRLLQHFEQSPDLDLTSLEMLVLDEADRLLDMGFRAQLS 468 GL++ TK T++Q AIPHAL GRD+LGAAKTGSGKTLAFL+P+LE+++RSR +GLGALIISPTRELA QI +VLR +GK H G++ GG +F+ E+ +G + ++V TPGRLLQH EQ+P+ D+++L+MLVLDEADR++DMGF AQ++ Sbjct: 275 GLQKCKLTKPTKIQMGAIPHALAGRDILGAAKTGSGKTLAFLIPLLEKLYRSRWDSSEGLGALIISPTRELALQIFEVLRSIGKTHS-FSAGLIIGGKNFKEEQFRLGKMNIIVCTPGRLLQHLEQTPNFDVSTLQMLVLDEADRIMDMGFSAQVN 429
BLAST of mRNA_M-pyrifera_M_contig102128.459.1 vs. uniprot
Match: A0A2D4BS33_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BS33_PYTIN) HSP 1 Score: 192 bits (487), Expect = 9.020e-54 Identity = 97/156 (62.18%), Postives = 122/156 (78.21%), Query Frame = 1 Query: 1 GLERSGFTKLTEVQRAAIPHALVGRDVLGAAKTGSGKTLAFLVPVLERMFRSRRTGGDGLGALIISPTRELARQIMDVLRRVGKMHKGIVGGVVTGGVHFEREKREVGGLTVLVGTPGRLLQHFEQSPDLDLTSLEMLVLDEADRLLDMGFRAQLS 468 GL + GFTK T +Q AIPHAL GRD+LGAAKTGSGKTLAFL+P+LE+++R R DGLGAL+ISPTRELA QI +VLR VGK H G+V GG +F+ E+ + + +LV TPGR+LQH EQ+PD D T++++LVLDEADR+LDMGF+ QLS Sbjct: 284 GLAKCGFTKPTRIQIGAIPHALAGRDILGAAKTGSGKTLAFLLPLLEKLYRLRWDVEDGLGALVISPTRELALQIFEVLRSVGKFHS-FSAGLVIGGKNFKEEQYRLVRMNILVCTPGRMLQHMEQTPDFDATNVQLLVLDEADRILDMGFQQQLS 438
BLAST of mRNA_M-pyrifera_M_contig102128.459.1 vs. uniprot
Match: A0A3R7ZII9_9STRA (Helicase ATP-binding domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7ZII9_9STRA) HSP 1 Score: 181 bits (459), Expect = 1.040e-53 Identity = 90/156 (57.69%), Postives = 119/156 (76.28%), Query Frame = 1 Query: 1 GLERSGFTKLTEVQRAAIPHALVGRDVLGAAKTGSGKTLAFLVPVLERMFRSRRTGGDGLGALIISPTRELARQIMDVLRRVGKMHKGIVGGVVTGGVHFEREKREVGGLTVLVGTPGRLLQHFEQSPDLDLTSLEMLVLDEADRLLDMGFRAQLS 468 GL+R F K T++Q IPHAL GRD+L AAKTGSGKTLAFL+P+LE++FR R DG+GAL+ISPTRELA QI +VLR +GK H G+V GG +F+ E+ + + +LV TPGRLLQH EQ+ + +L++L++L+LDEADR+LDMGF QL+ Sbjct: 50 GLKRGKFAKPTKIQIGTIPHALAGRDILAAAKTGSGKTLAFLIPMLEKLFRQRWDVEDGVGALVISPTRELAMQIFEVLRSIGKSHT-FSAGLVIGGKNFQEEQYRIIKMNILVATPGRLLQHMEQTANFELSNLQVLILDEADRILDMGFSNQLT 204
BLAST of mRNA_M-pyrifera_M_contig102128.459.1 vs. uniprot
Match: A0A7S1G8S0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G8S0_9STRA) HSP 1 Score: 177 bits (448), Expect = 2.710e-53 Identity = 87/147 (59.18%), Postives = 113/147 (76.87%), Query Frame = 1 Query: 1 GLERSGFTKLTEVQRAAIPHALVGRDVLGAAKTGSGKTLAFLVPVLERMFRSRRTGGDGLGALIISPTRELARQIMDVLRRVGKMHKGIVGGVVTGGVHFEREKREVGGLTVLVGTPGRLLQHFEQSPDLDLTSLEMLVLDEADRLL 441 GL ++ F ++T++QR AIPH L GRDVLGAAKTGSGKTLAFL+PV+E ++R+R + DGLGA++ISPTRELA QI +VLR V H G+ G VTGG F+ E+ + L ++V TPGRLLQH EQ+P D + +++LVLDEADRLL Sbjct: 74 GLAKAKFKRMTQIQRVAIPHGLAGRDVLGAAKTGSGKTLAFLIPVVEALYRARWSREDGLGAIVISPTRELALQIFEVLRAVAGSHFGLTAGFVTGGKPFQEEQYAMSKLNIIVCTPGRLLQHMEQTPGFDASLVKVLVLDEADRLL 220
BLAST of mRNA_M-pyrifera_M_contig102128.459.1 vs. uniprot
Match: A0A0G4H3S2_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4H3S2_9ALVE) HSP 1 Score: 190 bits (483), Expect = 3.220e-53 Identity = 98/156 (62.82%), Postives = 117/156 (75.00%), Query Frame = 1 Query: 1 GLERSGFTKLTEVQRAAIPHALVGRDVLGAAKTGSGKTLAFLVPVLERMFRSRRTGGDGLGALIISPTRELARQIMDVLRRVGKMHKGIVGGVVTGGVHFEREKREVGGLTVLVGTPGRLLQHFEQSPDLDLTSLEMLVLDEADRLLDMGFRAQLS 468 GL+ GF +LT +Q+ AIPHAL GRDVLG AKTGSGKTLAF+VP++ER+FR R T DGLGALI+SPTRELA QI DVLR VGK H + G V GG E+ + L VLV TPGRLLQH ++SP D ++L++LVLDEADR LD+GFR LS Sbjct: 142 GLKAGGFVQLTPIQKEAIPHALAGRDVLGEAKTGSGKTLAFIVPIVERLFRQRFTSTDGLGALILSPTRELAVQIFDVLRNVGKQHD-LSAGCVIGGKDVSAEQHRIHTLNVLVATPGRLLQHMDESPSWDASNLQILVLDEADRCLDLGFRDTLS 296
BLAST of mRNA_M-pyrifera_M_contig102128.459.1 vs. uniprot
Match: A0A485KZ34_9STRA (Aste57867_13805 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KZ34_9STRA) HSP 1 Score: 188 bits (477), Expect = 4.270e-53 Identity = 94/156 (60.26%), Postives = 122/156 (78.21%), Query Frame = 1 Query: 1 GLERSGFTKLTEVQRAAIPHALVGRDVLGAAKTGSGKTLAFLVPVLERMFRSRRTGGDGLGALIISPTRELARQIMDVLRRVGKMHKGIVGGVVTGGVHFEREKREVGGLTVLVGTPGRLLQHFEQSPDLDLTSLEMLVLDEADRLLDMGFRAQLS 468 GL+R F K T++Q IPHALVGRD+L AAKTGSGKTLAFL+P+LE+++R+R DG+GALIISPTRELA QI +VLR +GK H G+V GG +F+ E+ + + +LV TPGRLLQH EQ+P+ +L++L ML+LDEADR+LDMGF AQL+ Sbjct: 50 GLKRGKFAKPTKIQIGTIPHALVGRDILAAAKTGSGKTLAFLIPMLEKLYRNRWDTEDGVGALIISPTRELAMQIFEVLRSIGKSHS-FSAGLVIGGKNFQEEQYRIIKMNILVATPGRLLQHMEQTPNFELSNLLMLILDEADRILDMGFSAQLT 204 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102128.459.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig102128.459.1 >prot_M-pyrifera_M_contig102128.459.1 ID=prot_M-pyrifera_M_contig102128.459.1|Name=mRNA_M-pyrifera_M_contig102128.459.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=156bp GLERSGFTKLTEVQRAAIPHALVGRDVLGAAKTGSGKTLAFLVPVLERMFback to top mRNA from alignment at M-pyrifera_M_contig102128:5..472- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig102128.459.1 ID=mRNA_M-pyrifera_M_contig102128.459.1|Name=mRNA_M-pyrifera_M_contig102128.459.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=468bp|location=Sequence derived from alignment at M-pyrifera_M_contig102128:5..472- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig102128:5..472- >mRNA_M-pyrifera_M_contig102128.459.1 ID=mRNA_M-pyrifera_M_contig102128.459.1|Name=mRNA_M-pyrifera_M_contig102128.459.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=936bp|location=Sequence derived from alignment at M-pyrifera_M_contig102128:5..472- (Macrocystis pyrifera P11B4 male)back to top |