mRNA_M-pyrifera_M_contig102112.456.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig102112.456.1 vs. uniprot
Match: A0A2E7D1F4_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7D1F4_9PLAN) HSP 1 Score: 161 bits (408), Expect = 2.950e-43 Identity = 92/221 (41.63%), Postives = 135/221 (61.09%), Query Frame = 1 Query: 1 IINGPAMV-IAQDHSEPVVDTLDVPPL--EQPTTIDPATIVPAPLAKKITWEFSDLTLQEMVNEFADRMEMPVYIQEDRLNDLGVPIDEPMEGRIDDLPAYLLLDRVLPPLSLTWYVDDGILNITTIEDADERLTLRSYVITDLLDEGYSVDKLADLTQSMTEGPWQDVDGMGGTWTVVGDVVFLRQTDRVHREVAGLLKALRQDALECYSSAPPIHQVIR 654 +I G A V +AQD ++P + + PP ++P T+DPA VP LAK T EF+D +L+++ ++PV LN+ GV + EP+ R+ + P YLLL+R L L+L WYV+D IL ITT A ER++ + Y + DLLD G+ ++++ Q T GPW++ G GG +GDV+F+RQTD +HREV GLL ALR+ A ++ PP H +R Sbjct: 12 LIAGTASVSMAQDEADPA-EAIPKPPTIPDEPKTVDPANHVPEQLAKLATVEFADKSLRDIAAWIQTEQKIPVLFDTKTLNETGVALGEPVTDRLQNEPVYLLLNR-LRGLNLAWYVEDNILRITTTSVASERMSTQPYNVGDLLDGGFKQAAISNVIQETTSGPWEEESGEGGGLEWLGDVLFVRQTDNMHREVNGLLAALRKHARRTFTLDPPQHGALR 230
BLAST of mRNA_M-pyrifera_M_contig102112.456.1 vs. uniprot
Match: A0A5C6BCY7_9PLAN (Uncharacterized protein n=1 Tax=Symmachiella macrocystis TaxID=2527985 RepID=A0A5C6BCY7_9PLAN) HSP 1 Score: 146 bits (369), Expect = 1.600e-37 Identity = 79/187 (42.25%), Postives = 123/187 (65.78%), Query Frame = 1 Query: 79 EQPTTIDPATIVPAPLAKKITWEFSDLTLQEMVNEFADRMEMPVYIQEDRLNDLGVPIDEPMEGRIDDLPAYLLLDRVLPPLSLTWYVDDGILNITTIEDADERLTLRSYVITDLLDEGYSVDKLAD-LTQSMTEGPWQDVDGMGGTWTVVGDVVFLRQTDRVHREVAGLLKALRQDALECYSSAPP 636 ++P TIDPAT++P LA + T +FSD +L+E+++ D + V ++++ L + G+ + EP+ ++DD P YLLL+R L L L WY ++ IL+ITT E A+E+L L+SY I DLLD GY D L + +T S+ W++V G G + +GDVVF+RQT+ + R+V GLL LR+ + ++ PP Sbjct: 44 DEPKTIDPATLMPKKLAARATVDFSDSSLREVLDWLRDEQGLVVLLEKNALAEKGISLSEPLSDQLDDAPIYLLLNR-LRSLGLDWYFENEILHITTAEIAEEQLQLQSYNIGDLLDAGYDEDSLNETITSSVEPDSWEEVGGQG-VYRTLGDVVFVRQTNDLQRQVQGLLAGLRKHGRQTFTYDPP 228
BLAST of mRNA_M-pyrifera_M_contig102112.456.1 vs. uniprot
Match: UPI0011885984 (hypothetical protein n=1 Tax=Symmachiella dynata TaxID=2527995 RepID=UPI0011885984) HSP 1 Score: 144 bits (364), Expect = 8.450e-37 Identity = 77/187 (41.18%), Postives = 122/187 (65.24%), Query Frame = 1 Query: 79 EQPTTIDPATIVPAPLAKKITWEFSDLTLQEMVNEFADRMEMPVYIQEDRLNDLGVPIDEPMEGRIDDLPAYLLLDRVLPPLSLTWYVDDGILNITTIEDADERLTLRSYVITDLLDEGYSVDKLAD-LTQSMTEGPWQDVDGMGGTWTVVGDVVFLRQTDRVHREVAGLLKALRQDALECYSSAPP 636 ++P T+DPAT++P LA + T +FSD +L+E+++ D + V ++++ L + G+ + EP+ ++D P YLLL+R L L L WY ++ IL+ITT E A+E+L L+SY I+DL + GY D LAD +T ++ WQ++ G G + +GDVVF+RQT + R+V GL ALR+ + +S PP Sbjct: 44 DEPRTVDPATLMPKKLAARATVDFSDSSLREVLDWLRDEQGLVVLLEKNALAEKGISLSEPLSDHLNDAPIYLLLNR-LRSLGLDWYFENEILHITTAEIAEEQLQLQSYNISDLFEAGYDEDSLADAVTTTVKPESWQEIGGPG-VYQTLGDVVFVRQTGDIQRQVQGLFAALRKHGRQTFSYDPP 228
BLAST of mRNA_M-pyrifera_M_contig102112.456.1 vs. uniprot
Match: A0A3L7SFI6_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7SFI6_9BACT) HSP 1 Score: 142 bits (359), Expect = 5.100e-36 Identity = 84/234 (35.90%), Postives = 125/234 (53.42%), Query Frame = 1 Query: 13 PAMVIAQDHSEPVVDTLD------VPPL--------------EQPTTIDPATIVPAPLAKKITWEFSDLTLQEMVNEFADRMEMPVYIQEDRLNDLGVPIDEPMEGRIDDLPAYLLLDRVLPPLSLTWYVDDGILNITTIEDADERLTLRSYVITDLLDEGYSVDKLADLTQSMTEGPWQDVDGMGGTWTVVGDVVFLRQTDRVHREVAGLLKALRQDALECYSSAPPIHQVIR 654 P+ +AQ EP+ + ++ +PPL E+P TIDPAT+VPA +A+++T F L+++ D + M V I L D G+ EP+ ++D P YLLL+R L L L WY +D L +TT AD+ T Y + DL D G+ D T G W+++ G GG ++GDV+F+RQ+D +H+E+AGLL ALR ++ PP H +IR Sbjct: 27 PSPCLAQLGGEPIAEAIEGEADAVIPPLVEGEKPPSLLIEIAEEPKTIDPATLVPAAVAQRVTVRFEQKPLRDIAKWLLDELSMTVLIDYPALADEGLLAGEPITDHLEDAPLYLLLNR-LQSLQLGWYFEDETLYLTTKSQADQHYTTVPYNLGDLFDAGFRSDATLRTVGGTTGGVWEEMSGEGGASVLLGDVLFVRQSDAIHQEIAGLLAALRTHGRRTLTNDPPEHGLIR 259
BLAST of mRNA_M-pyrifera_M_contig102112.456.1 vs. uniprot
Match: A0A517ZME9_9PLAN (Uncharacterized protein n=1 Tax=Symmachiella dynata TaxID=2527995 RepID=A0A517ZME9_9PLAN) HSP 1 Score: 142 bits (358), Expect = 6.020e-36 Identity = 76/187 (40.64%), Postives = 122/187 (65.24%), Query Frame = 1 Query: 79 EQPTTIDPATIVPAPLAKKITWEFSDLTLQEMVNEFADRMEMPVYIQEDRLNDLGVPIDEPMEGRIDDLPAYLLLDRVLPPLSLTWYVDDGILNITTIEDADERLTLRSYVITDLLDEGYSVDKLAD-LTQSMTEGPWQDVDGMGGTWTVVGDVVFLRQTDRVHREVAGLLKALRQDALECYSSAPP 636 ++P T+DPAT++P LA + T +FSD +L+E+++ D + V ++++ L + G+ + EP+ ++D P YLLL+R L L L WY ++ IL+ITT E A+E+L L+SY I DLLD GY D + + +T S+ W++V G G + +GDVVF+RQT+ + R+V GLL LR+ + ++ PP Sbjct: 44 DEPKTVDPATLMPKKLAARATVDFSDSSLREVLDWLRDEQGLVVLLEKNALAEKGISLSEPLSDHLNDAPIYLLLNR-LRSLGLDWYFENEILHITTAEIAEEQLQLQSYNIGDLLDAGYDEDSINETITTSVKPESWEEVGGPG-VYRTLGDVVFVRQTNDIQRQVQGLLAGLRKHGRQTFTYDPP 228
BLAST of mRNA_M-pyrifera_M_contig102112.456.1 vs. uniprot
Match: A0A7C7SW68_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7C7SW68_9PLAN) HSP 1 Score: 135 bits (339), Expect = 6.810e-35 Identity = 75/189 (39.68%), Postives = 115/189 (60.85%), Query Frame = 1 Query: 79 EQPTTIDPATIVPAPLAKKITWEFSDLTLQEMVNEFADRMEMPVYIQEDRLNDLGVPIDEPMEGRIDDLPAYLLLDRVLPPLSLTWYVDDGILNITTIEDADERLTLRSYVITDLLDEGYSVDKLAD-LTQSMTEGPWQDVDGMGGTWTVVGDVVFLRQTDRVHREVAGLLKALRQDALECYSSAPPIH 642 ++P T+DPA + P PLA T EF++ +L+E+V + + ++ V + L D G+ + EP+ G +D+ P YLLL+R L L+L WY+ D IL+IT+ ER + Y + DLLD+GY+ D L++ +T + W++ G G ++GDV+F+RQ D HREV GLL ALR+ +S PP H Sbjct: 46 DEPKTVDPADLAPKPLAVLATVEFNNSSLRELVT-WLEEQQLVVLLDNKALADEGISLGEPVSGHLDNAPIYLLLNR-LSSLNLAWYMHDDILHITSTAALQERQSTEPYNVGDLLDDGYAADSLSEVITYGIAPDSWEENGGYG-VIQLLGDVLFVRQNDAQHREVRGLLAALRKHGRRTLTSDPPQH 231
BLAST of mRNA_M-pyrifera_M_contig102112.456.1 vs. uniprot
Match: A0A356ENQ0_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A356ENQ0_9PLAN) HSP 1 Score: 135 bits (340), Expect = 1.750e-33 Identity = 82/219 (37.44%), Postives = 130/219 (59.36%), Query Frame = 1 Query: 1 IINGPAMVIAQDHSEPVVDTLDVPPLEQPTTIDPATIVPAPLAKKITWEFSDLTLQEMVNEFADRMEMPVYIQEDRLNDLGVPIDEPMEGRIDDLPAYLLLDRVLPPLSLTWYVDDGILNITTIEDADERLTLRSYVITDLLDEGYSVDKLADLTQSMTE-GPWQDVDGMGGTWTVVGDVVFLRQTDRVHREVAGLLKALRQDALECYSSAPPIHQVIR 654 +++ AM+ A D + P +L V ++P TIDPA ++PA LA + T F+D +L+E+++ ++ V + E L+++GV EP+ R+D+ P YLLL+R L L L WY +D IL++T+ E+AD R + + DLLD GY +L D+ + + W + G G T ++GDV+F+RQTD + R+V GLL ALRQ + + P H +R Sbjct: 22 LLSSAAMLRAADEAAP--PSLPVI-ADEPKTIDPAALIPAKLAARATVNFTDSSLRELIDWLRAECKLVVLLDEAALSEIGVAPSEPVSDRLDNAPIYLLLNR-LRSLGLAWYFEDDILHLTSAEEADGRRVTVPHNVGDLLDAGYDQGELIDVIMTTLDYETWAEYGGEG-TADILGDVLFVRQTDELQRKVQGLLAALRQHGRQTFVLDPTEHLALR 235
BLAST of mRNA_M-pyrifera_M_contig102112.456.1 vs. uniprot
Match: A0A518K4C6_9BACT (Uncharacterized protein n=1 Tax=Botrimarina mediterranea TaxID=2528022 RepID=A0A518K4C6_9BACT) HSP 1 Score: 133 bits (335), Expect = 6.780e-33 Identity = 72/193 (37.31%), Postives = 115/193 (59.59%), Query Frame = 1 Query: 79 EQPTTIDPATIVPAPLAKKITWEFSDLTLQEMVNEFADRMEMPVYIQEDRLNDLGVPIDEPMEGRIDDLPAYLLLDRVLPPLSLTWYVDDGILNITTIEDADERLTLRSYVITDLLDEGYSVDKLAD-LTQSMTEGPWQDVDGMGGTWTVVGDVVFLRQTDRVHREVAGLLKALRQDALECYSSAPPIHQVIR 654 + P TIDPA I+ L K ++ +F++ +L+E+V DR + V + E LND GV + EP+ RID+ P YLLL+R L + + WY++ G+L++T+ E+ R+ ++Y ++DL+D G VD L D + ++ W + G G +GDV+F+ Q DRV +VA LL+ALR + P +H+ IR Sbjct: 27 DTPKTIDPARILSELLTKPVSGDFTESSLRELVEWLRDRNGLSVLVHERALNDAGVSLAEPLSDRIDNQPLYLLLNR-LQQIEVAWYMEKGMLHLTSEEEVLTRIVTQAYNVSDLIDSGIDVDSLIDTIVSTIAADTWAENGGGEGEIRAIGDVLFVSQNDRVLSQVAALLEALRSHGRQTMVGEPSLHEKIR 218
BLAST of mRNA_M-pyrifera_M_contig102112.456.1 vs. uniprot
Match: A0A517QKX7_9PLAN (Uncharacterized protein n=1 Tax=Thalassoglobus polymorphus TaxID=2527994 RepID=A0A517QKX7_9PLAN) HSP 1 Score: 133 bits (334), Expect = 1.290e-32 Identity = 70/192 (36.46%), Postives = 114/192 (59.38%), Query Frame = 1 Query: 79 EQPTTIDPATIVPAPLAKKITWEFSDLTLQEMVNEFADRMEMPVYIQEDRLNDLGVPIDEPMEGRIDDLPAYLLLDRVLPPLSLTWYVDDGILNITTIEDADERLTLRSYVITDLLDEGYSVDKLADLTQSMTEGPWQDVDGMGGTWTVVGDVVFLRQTDRVHREVAGLLKALRQDALECYSSAPPIHQVIR 654 ++P T+DP +++ LA+K + F++ + +E+ +PV I E ++ G+ I + ++D P Y LL+R L SL+W+++D ++ ITT AD+ + ++YVI DLLD GY + L D Q MT G W ++D GG ++GDV+F++QT VH E+ GLL ALR+ E +S P +H +R Sbjct: 48 DEPKTVDPVSLIHPKLAQKASVNFNNSSYEELREWLKKTTGLPVVIDEAEFSNEGLSIHDEYSDTLNDAPIYFLLNR-LNANSLSWFIEDEVIRITTTLAADDLMRTKTYVIGDLLDNGYDEESLIDTIQEMTGGAWYEIDQEGGDVKLLGDVLFVKQTYHVHLELEGLLSALRKYGRETATSEPELHFELR 238
BLAST of mRNA_M-pyrifera_M_contig102112.456.1 vs. uniprot
Match: A0A2S8G047_9BACT (Uncharacterized protein n=1 Tax=Blastopirellula marina TaxID=124 RepID=A0A2S8G047_9BACT) HSP 1 Score: 131 bits (330), Expect = 3.940e-32 Identity = 78/212 (36.79%), Postives = 125/212 (58.96%), Query Frame = 1 Query: 25 IAQDHSEPVV-DTLDVPPLEQPTTIDPATIVPAPLAKKITWEFSDLTLQEMVNEFADRMEMPVYIQEDRLNDLGVPIDEPMEGRIDDLPAYLLLDRVLPPLSLTWYVDDGILNITTIEDADERLTLRSYVITDLLDEGYSVDKLAD-LTQSMTEGPWQDVDGMGGTWTVVGDVVFLRQTDRVHREVAGLLKALRQDALECYSSAPPIHQVIR 654 +AQD + V + L V P ++P IDPAT+VP PLA K T E TL E+ ++ + V I + + +GV +P+ + + P YL LDR + + L+WY + +++ T+IE+ + RLT+ Y + DLLD GY +D + + +T ++ W+++ G G +GDV+F+RQ D +HR++ GLL+ALRQ + PP+HQ IR Sbjct: 28 VAQDEAVEVKKEQLPVIP-DEPRAIDPATLVPEPLAVKKTAELQGATLSEVSKWLEEQCGVEVLIDKGAVASIGVLPTDPVGENLTNTPVYLFLDR-MRRVGLSWYYVNKVVHFTSIEEFEGRLTMVPYNVGDLLDSGYEMDHVVEAITTTIDPDSWEELGG-AGVLDTIGDVLFVRQNDDIHRKIRGLLQALRQHGRRTFIYDPPVHQQIR 236 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102112.456.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig102112.456.1 >prot_M-pyrifera_M_contig102112.456.1 ID=prot_M-pyrifera_M_contig102112.456.1|Name=mRNA_M-pyrifera_M_contig102112.456.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=212bp MVIAQDHSEPVVDTLDVPPLEQPTTIDPATIVPAPLAKKITWEFSDLTLQback to top mRNA from alignment at M-pyrifera_M_contig102112:9..662+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig102112.456.1 ID=mRNA_M-pyrifera_M_contig102112.456.1|Name=mRNA_M-pyrifera_M_contig102112.456.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=654bp|location=Sequence derived from alignment at M-pyrifera_M_contig102112:9..662+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig102112:9..662+ >mRNA_M-pyrifera_M_contig102112.456.1 ID=mRNA_M-pyrifera_M_contig102112.456.1|Name=mRNA_M-pyrifera_M_contig102112.456.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1272bp|location=Sequence derived from alignment at M-pyrifera_M_contig102112:9..662+ (Macrocystis pyrifera P11B4 male)back to top |