mRNA_M-pyrifera_M_contig102109.455.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig102109.455.1 vs. uniprot
Match: A0A265E101_9GAMM (GGDEF domain-containing response regulator n=12 Tax=Halomonas TaxID=2745 RepID=A0A265E101_9GAMM) HSP 1 Score: 391 bits (1005), Expect = 1.310e-131 Identity = 199/220 (90.45%), Postives = 207/220 (94.09%), Query Frame = 1 Query: 1 LHGYRVADQLLCLISQQLRQQLDAECLLGLWGGSELLVITPTADPTQLQHLAEQLLECFDQDQALEELLLPLSARIGISAEAGYFEAERLVHMAALALPPLESLKVQYYTPALETKQRHRLHIQQAIRGATERGEMSLAFQPKLSLADHKILGAEALLRWQHPEFGLISPGEFIPLAEASGDILCIGDWVLDEAMRYISTWRAQGVLNDDFHIAVNVAAR 660 LHGYRVADQLL ISQ+LRQQLDAECLLGLWGGSELLVITPTA+P +L HLAE LL CF+ DQAL ELLLPL ARIGISAEAGYFE ERLVHMAALALPPLESLKVQ+YTPALETKQRHRL +QQAIRGATERGEMSLAFQPKLSLADHKILGAEALLRWQHPEFGLISPGEFIPLAEASGDIL IGDWVLDEAMRYIS WRA+G+LNDDFHIAVNVAAR Sbjct: 199 LHGYRVADQLLRFISQRLRQQLDAECLLGLWGGSELLVITPTANPDKLLHLAELLLGCFENDQALGELLLPLRARIGISAEAGYFETERLVHMAALALPPLESLKVQHYTPALETKQRHRLQLQQAIRGATERGEMSLAFQPKLSLADHKILGAEALLRWQHPEFGLISPGEFIPLAEASGDILSIGDWVLDEAMRYISLWRAKGLLNDDFHIAVNVAAR 418
BLAST of mRNA_M-pyrifera_M_contig102109.455.1 vs. uniprot
Match: A0A0D5M0U2_9GAMM (Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=5 Tax=Halomonas TaxID=2745 RepID=A0A0D5M0U2_9GAMM) HSP 1 Score: 376 bits (966), Expect = 1.010e-125 Identity = 191/220 (86.82%), Postives = 202/220 (91.82%), Query Frame = 1 Query: 1 LHGYRVADQLLCLISQQLRQQLDAECLLGLWGGSELLVITPTADPTQLQHLAEQLLECFDQDQALEELLLPLSARIGISAEAGYFEAERLVHMAALALPPLESLKVQYYTPALETKQRHRLHIQQAIRGATERGEMSLAFQPKLSLADHKILGAEALLRWQHPEFGLISPGEFIPLAEASGDILCIGDWVLDEAMRYISTWRAQGVLNDDFHIAVNVAAR 660 LHGY+VADQLL ISQQLRQQL A+CLLGLWGGSELLVITPTAD +L LAEQLL CF+QDQAL+ELLLPLSARIGIS E G+FE ERLVHMAALALPP SL+VQ YTPA+E KQRHRLHIQQAIRGATERGEMSLAFQPKLSLA HKILGAEALLRWQHPEFGLISPGEFIPLAEASGDIL IGDWVL+EAMRYI+ WRAQG+LNDDFHIAVNVAAR Sbjct: 199 LHGYQVADQLLRHISQQLRQQLSADCLLGLWGGSELLVITPTADSAKLTQLAEQLLHCFEQDQALDELLLPLSARIGISGETGHFETERLVHMAALALPPQGSLRVQCYTPAIEEKQRHRLHIQQAIRGATERGEMSLAFQPKLSLAGHKILGAEALLRWQHPEFGLISPGEFIPLAEASGDILAIGDWVLNEAMRYINLWRAQGLLNDDFHIAVNVAAR 418
BLAST of mRNA_M-pyrifera_M_contig102109.455.1 vs. uniprot
Match: UPI001F0FA517 (EAL domain-containing protein n=1 Tax=Halomonas neptunia TaxID=115551 RepID=UPI001F0FA517) HSP 1 Score: 366 bits (940), Expect = 8.460e-122 Identity = 186/220 (84.55%), Postives = 199/220 (90.45%), Query Frame = 1 Query: 1 LHGYRVADQLLCLISQQLRQQLDAECLLGLWGGSELLVITPTADPTQLQHLAEQLLECFDQDQALEELLLPLSARIGISAEAGYFEAERLVHMAALALPPLESLKVQYYTPALETKQRHRLHIQQAIRGATERGEMSLAFQPKLSLADHKILGAEALLRWQHPEFGLISPGEFIPLAEASGDILCIGDWVLDEAMRYISTWRAQGVLNDDFHIAVNVAAR 660 LHGYRVADQLL ISQ+LR+QL ECLLGLWGGSEL+VIT TADP +L +A QLL CF+QDQAL+ LLLPLSARIGIS EAG FE ERLVHMAALALPP +L VQ YTPA+E KQRHRLH+QQAIRGATERGEMSLAFQPKLSLADHKILGAEALLRWQHPEFGLISPGEFIPLAEASGDIL IGDWVLDEAMR+I+ WRAQG+LNDDFHIAVNVAAR Sbjct: 199 LHGYRVADQLLRFISQRLRRQLSPECLLGLWGGSELVVITTTADPDKLLQMANQLLACFEQDQALDALLLPLSARIGISGEAGPFETERLVHMAALALPPEGTLLVQRYTPAIEEKQRHRLHLQQAIRGATERGEMSLAFQPKLSLADHKILGAEALLRWQHPEFGLISPGEFIPLAEASGDILSIGDWVLDEAMRHINAWRAQGLLNDDFHIAVNVAAR 418
BLAST of mRNA_M-pyrifera_M_contig102109.455.1 vs. uniprot
Match: A0A0F9WAM6_9ZZZZ (Uncharacterized protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9WAM6_9ZZZZ) HSP 1 Score: 355 bits (911), Expect = 1.990e-117 Identity = 174/220 (79.09%), Postives = 200/220 (90.91%), Query Frame = 1 Query: 1 LHGYRVADQLLCLISQQLRQQLDAECLLGLWGGSELLVITPTADPTQLQHLAEQLLECFDQDQALEELLLPLSARIGISAEAGYFEAERLVHMAALALPPLESLKVQYYTPALETKQRHRLHIQQAIRGATERGEMSLAFQPKLSLADHKILGAEALLRWQHPEFGLISPGEFIPLAEASGDILCIGDWVLDEAMRYISTWRAQGVLNDDFHIAVNVAAR 660 LHGYR+AD+LL ISQQLRQ+LDA+CLLGLWGGSE+LVITPTA+ +L LA+++LECF+ DQAL++LLLP+SARIGIS E GYF+ ERLVHMAALALPP E+ VQ YTPALE KQRH+LH+QQAIRGAT+RGEMSLAFQPK+SL DHKILGAEALLRWQHPEFGLISPGEFIPLAEASGDIL IGDWV+DEAMR+I+ WRA +LN+DFHIA+NVAAR Sbjct: 199 LHGYRIADKLLYFISQQLRQKLDADCLLGLWGGSEMLVITPTANQDKLLQLADRILECFEHDQALDDLLLPVSARIGISGEEGYFDTERLVHMAALALPPQETRFVQCYTPALEEKQRHQLHLQQAIRGATQRGEMSLAFQPKISLTDHKILGAEALLRWQHPEFGLISPGEFIPLAEASGDILLIGDWVIDEAMRHINEWRALELLNNDFHIAINVAAR 418
BLAST of mRNA_M-pyrifera_M_contig102109.455.1 vs. uniprot
Match: A0A651D5B7_HALSX (GGDEF domain-containing response regulator n=1 Tax=Halomonas sp. TaxID=1486246 RepID=A0A651D5B7_HALSX) HSP 1 Score: 353 bits (907), Expect = 7.960e-117 Identity = 177/220 (80.45%), Postives = 197/220 (89.55%), Query Frame = 1 Query: 1 LHGYRVADQLLCLISQQLRQQLDAECLLGLWGGSELLVITPTADPTQLQHLAEQLLECFDQDQALEELLLPLSARIGISAEAGYFEAERLVHMAALALPPLESLKVQYYTPALETKQRHRLHIQQAIRGATERGEMSLAFQPKLSLADHKILGAEALLRWQHPEFGLISPGEFIPLAEASGDILCIGDWVLDEAMRYISTWRAQGVLNDDFHIAVNVAAR 660 LH YRVADQLL ISQ+LR++LDA+CL+GLWGGSELLVITPTA+ ++L LA+QLL CF+QDQ L++LLLP+SARIGIS E GYF+ ERLVH AALALP +L VQ YTPALE KQRHRLHIQQAIRGATERGEMSLAFQPK+SLADHKILGAEALLRW+HPEFG ISPGEFIPLAEASGDIL IGDWV+ EAMR+I WRAQG+LNDDFHIAVNVAAR Sbjct: 199 LHSYRVADQLLHAISQRLRKRLDADCLIGLWGGSELLVITPTAEKSKLLQLADQLLACFEQDQVLDDLLLPVSARIGISGEQGYFDIERLVHKAALALPRQGTLSVQCYTPALEAKQRHRLHIQQAIRGATERGEMSLAFQPKISLADHKILGAEALLRWEHPEFGSISPGEFIPLAEASGDILSIGDWVIGEAMRHIIAWRAQGLLNDDFHIAVNVAAR 418
BLAST of mRNA_M-pyrifera_M_contig102109.455.1 vs. uniprot
Match: A0A101D5J7_9GAMM (Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Halomonas sp. 54_146 TaxID=1635257 RepID=A0A101D5J7_9GAMM) HSP 1 Score: 352 bits (902), Expect = 4.510e-116 Identity = 176/220 (80.00%), Postives = 197/220 (89.55%), Query Frame = 1 Query: 1 LHGYRVADQLLCLISQQLRQQLDAECLLGLWGGSELLVITPTADPTQLQHLAEQLLECFDQDQALEELLLPLSARIGISAEAGYFEAERLVHMAALALPPLESLKVQYYTPALETKQRHRLHIQQAIRGATERGEMSLAFQPKLSLADHKILGAEALLRWQHPEFGLISPGEFIPLAEASGDILCIGDWVLDEAMRYISTWRAQGVLNDDFHIAVNVAAR 660 LHGY+ ADQLL LISQ+LRQ L AE LLGLWGGSELLVITPTA+P++L LAE+LL CF+QDQ L+ LLLP+SARIGIS G+F+ ERLVHMAALALPP E+ +Q+YTPALE KQRHRL +QQAIRGAT+RGEM+LAFQPKL+LADHKILGAEALLRW+HPEFG ISPGEFIPLAEASGDIL IGDWVLDEAMR+IS WRAQG+LNDDFHIAVNVA R Sbjct: 199 LHGYQTADQLLRLISQRLRQPLSAESLLGLWGGSELLVITPTAEPSKLLALAERLLACFEQDQTLDALLLPVSARIGISCSEGFFDTERLVHMAALALPPHETPPIQHYTPALEEKQRHRLRLQQAIRGATQRGEMTLAFQPKLALADHKILGAEALLRWKHPEFGHISPGEFIPLAEASGDILSIGDWVLDEAMRHISAWRAQGLLNDDFHIAVNVATR 418
BLAST of mRNA_M-pyrifera_M_contig102109.455.1 vs. uniprot
Match: A0A511UL50_9GAMM (Uncharacterized protein n=1 Tax=Halovibrio variabilis TaxID=31910 RepID=A0A511UL50_9GAMM) HSP 1 Score: 340 bits (871), Expect = 2.210e-111 Identity = 173/220 (78.64%), Postives = 188/220 (85.45%), Query Frame = 1 Query: 1 LHGYRVADQLLCLISQQLRQQLDAECLLGLWGGSELLVITPTADPTQLQHLAEQLLECFDQDQALEELLLPLSARIGISAEAGYFEAERLVHMAALALPPLESLKVQYYTPALETKQRHRLHIQQAIRGATERGEMSLAFQPKLSLADHKILGAEALLRWQHPEFGLISPGEFIPLAEASGDILCIGDWVLDEAMRYISTWRAQGVLNDDFHIAVNVAAR 660 LHGY +ADQLL I QQLRQ+LDA+CLLGLWGGSELLVI PT D +L LA++L CF+QDQ L ELLLP+SARIGIS E +F+ ERLVHMAALALP SL VQ YTPALE KQRHRL +QQAIRGATERGEMSLAFQPKLSLA HKILGAEALLRWQHPE GLISPGEFIPLAEASGDIL IGDWV+ EAMR+I+ WRA G+LNDDFHIAVNVA R Sbjct: 199 LHGYPIADQLLYFIGQQLRQRLDADCLLGLWGGSELLVIAPTGDAAKLLPLADRLFTCFEQDQTLGELLLPISARIGISGETRHFDTERLVHMAALALPLHGSLTVQCYTPALEAKQRHRLQLQQAIRGATERGEMSLAFQPKLSLATHKILGAEALLRWQHPELGLISPGEFIPLAEASGDILSIGDWVIGEAMRHINEWRALGLLNDDFHIAVNVATR 418
BLAST of mRNA_M-pyrifera_M_contig102109.455.1 vs. uniprot
Match: A0A857GU09_9GAMM (GGDEF domain-containing response regulator n=5 Tax=Halomonas TaxID=2745 RepID=A0A857GU09_9GAMM) HSP 1 Score: 308 bits (788), Expect = 6.320e-99 Identity = 153/220 (69.55%), Postives = 183/220 (83.18%), Query Frame = 1 Query: 1 LHGYRVADQLLCLISQQLRQQLDAECLLGLWGGSELLVITPTADPTQLQHLAEQLLECFDQDQALEELLLPLSARIGISAEAGYFEAERLVHMAALALPPLESLKVQYYTPALETKQRHRLHIQQAIRGATERGEMSLAFQPKLSLADHKILGAEALLRWQHPEFGLISPGEFIPLAEASGDILCIGDWVLDEAMRYISTWRAQGVLNDDFHIAVNVAAR 660 LHGY +ADQL+ IS +L QL+A LGLWGGSELLVITPTA+ ++L+ LA +LL CF+ DQ L +LLLPL+ARIGIS G+F+ ERLVHMAALALP SL++Q Y LE QRHRLH+QQAIRGAT+RGEMSLAFQPKLSL +++GAEALLRW HPE G +SPG+FIPLAEASGDIL IG+WVL+EAMRYI+ WRA+G+L+D+FHIAVNVAAR Sbjct: 199 LHGYGIADQLMVHISHRLDDQLEASSTLGLWGGSELLVITPTAELSELRQLASRLLSCFEHDQTLGDLLLPLNARIGISWSQGHFKTERLVHMAALALPQSGSLRLQSYNETLENHQRHRLHLQQAIRGATQRGEMSLAFQPKLSLETQRVIGAEALLRWHHPELGHVSPGDFIPLAEASGDILSIGEWVLEEAMRYIADWRAKGLLDDNFHIAVNVAAR 418
BLAST of mRNA_M-pyrifera_M_contig102109.455.1 vs. uniprot
Match: A0A1N6CUG8_9GAMM (Diguanylate cyclase (GGDEF) domain-containing protein n=18 Tax=Halomonadaceae TaxID=28256 RepID=A0A1N6CUG8_9GAMM) HSP 1 Score: 307 bits (787), Expect = 8.920e-99 Identity = 154/220 (70.00%), Postives = 180/220 (81.82%), Query Frame = 1 Query: 1 LHGYRVADQLLCLISQQLRQQLDAECLLGLWGGSELLVITPTADPTQLQHLAEQLLECFDQDQALEELLLPLSARIGISAEAGYFEAERLVHMAALALPPLESLKVQYYTPALETKQRHRLHIQQAIRGATERGEMSLAFQPKLSLADHKILGAEALLRWQHPEFGLISPGEFIPLAEASGDILCIGDWVLDEAMRYISTWRAQGVLNDDFHIAVNVAAR 660 LHGY +ADQL+ IS +L QL +C LGLWGGSELLVIT +A+ T L+ LA +LL CFD DQ L +LLLPL+AR+GIS G+FE ERLVHMAALALP SL++Q Y LET+QRHRLH+QQA+RGAT+RGEMSLAFQPKLSLA +++GAEALLRW HPE G +SP +FIPLAEASGDIL IG+WVL+EAMRYI WR QG+LND FHIAVNVAAR Sbjct: 199 LHGYGIADQLIMHISHRLNAQLSPKCTLGLWGGSELLVITQSAELTGLRQLASRLLSCFDHDQTLGDLLLPLNARMGISWSHGHFETERLVHMAALALPQNGSLRIQNYNETLETQQRHRLHLQQAVRGATQRGEMSLAFQPKLSLATQQVIGAEALLRWYHPELGHVSPADFIPLAEASGDILSIGEWVLEEAMRYIVQWRQQGLLNDRFHIAVNVAAR 418
BLAST of mRNA_M-pyrifera_M_contig102109.455.1 vs. uniprot
Match: A0A6M1SJV0_HALSX (EAL domain-containing protein (Fragment) n=7 Tax=Bacteria TaxID=2 RepID=A0A6M1SJV0_HALSX) HSP 1 Score: 305 bits (780), Expect = 1.720e-98 Identity = 154/220 (70.00%), Postives = 180/220 (81.82%), Query Frame = 1 Query: 1 LHGYRVADQLLCLISQQLRQQLDAECLLGLWGGSELLVITPTADPTQLQHLAEQLLECFDQDQALEELLLPLSARIGISAEAGYFEAERLVHMAALALPPLESLKVQYYTPALETKQRHRLHIQQAIRGATERGEMSLAFQPKLSLADHKILGAEALLRWQHPEFGLISPGEFIPLAEASGDILCIGDWVLDEAMRYISTWRAQGVLNDDFHIAVNVAAR 660 LHGY VADQL+ IS +L QL C LG+WGGSELLVI + D L+ LA +LL CFDQDQA+ +LLLPL+ARIGIS G F++ERLVH AALALP SL++Q Y LET+QRHRLH+QQAIRGAT+RGEMSLAFQPKLSLA ++LGAEALLRW HPE G +SPG+FIPLAEASGDIL IG+WVL+EAMR+I+ WR QG+L+DDFHIAVNVAAR Sbjct: 134 LHGYSVADQLMVHISHRLHAQLCERCTLGIWGGSELLVIADSNDLKALRQLASKLLSCFDQDQAVGDLLLPLNARIGISWAQGPFDSERLVHKAALALPQSGSLRIQSYNETLETQQRHRLHLQQAIRGATQRGEMSLAFQPKLSLATQRVLGAEALLRWHHPELGHVSPGDFIPLAEASGDILSIGEWVLEEAMRHIAQWRQQGLLDDDFHIAVNVAAR 353 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102109.455.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig102109.455.1 >prot_M-pyrifera_M_contig102109.455.1 ID=prot_M-pyrifera_M_contig102109.455.1|Name=mRNA_M-pyrifera_M_contig102109.455.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=220bp LHGYRVADQLLCLISQQLRQQLDAECLLGLWGGSELLVITPTADPTQLQHback to top mRNA from alignment at M-pyrifera_M_contig102109:3..662+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig102109.455.1 ID=mRNA_M-pyrifera_M_contig102109.455.1|Name=mRNA_M-pyrifera_M_contig102109.455.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=660bp|location=Sequence derived from alignment at M-pyrifera_M_contig102109:3..662+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig102109:3..662+ >mRNA_M-pyrifera_M_contig102109.455.1 ID=mRNA_M-pyrifera_M_contig102109.455.1|Name=mRNA_M-pyrifera_M_contig102109.455.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1320bp|location=Sequence derived from alignment at M-pyrifera_M_contig102109:3..662+ (Macrocystis pyrifera P11B4 male)back to top |