mRNA_M-pyrifera_M_contig102080.448.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig102080.448.1 vs. uniprot
Match: UPI001C898EA1 (peroxisomal membrane protein 11C isoform X1 n=1 Tax=Puntigrus tetrazona TaxID=1606681 RepID=UPI001C898EA1) HSP 1 Score: 62.8 bits (151), Expect = 4.320e-9 Identity = 47/150 (31.33%), Postives = 74/150 (49.33%), Query Frame = 1 Query: 1 DSLQQLLSWTRTVSMLLYYPLEHLAWAKDAGVIRSKRVDSATLWVLSCRLWLLYVIAQITSRLLTLNTLSREI----------RRRDLSYDQKRDCRAQLRANRLQLVCNASDLCLAGNWS----LRSSPLGDFSIGLCGAVGSAAGLLH 408 D+L + +S V+ LYYP EH+AWA DA +I++K S WVLS LW + +I I + ++ L R++ R R+ ++ Q+ R Q+R ++ +DLC A +W L + + +GL G S GLL Sbjct: 86 DALVRWMSIVNNVADQLYYPCEHIAWAADAELIKTK---SDKWWVLSTGLWGISLILNILRSIRSVLILKRKVQTCQRSGSAQRSREEAFSQEAALRRQIRGEVFGILSGLADLCNAIHWMPPGFLWAGRFPPWLVGLMGTTSSLIGLLQ 232
BLAST of mRNA_M-pyrifera_M_contig102080.448.1 vs. uniprot
Match: A0A2R8QCF7_DANRE (Peroxisomal biogenesis factor 11 gamma n=2 Tax=Danio rerio TaxID=7955 RepID=A0A2R8QCF7_DANRE) HSP 1 Score: 60.1 bits (144), Expect = 4.130e-8 Identity = 45/150 (30.00%), Postives = 75/150 (50.00%), Query Frame = 1 Query: 1 DSLQQLLSWTRTVSMLLYYPLEHLAWAKDAGVIRSKRVDSATLWVLSCRLWLLYVIAQITSRLLTLNTLSREIRR---------RDLSYDQKRDCRAQLRANRLQLVCNASDLCLAGNWS----LRSSPLGDFSIGLCGAVGSAAGLLHS 411 D+ + +S V+ LYYP EH+AWA DA +I++K S WVLS LW ++ I + ++ L R+ ++ R+ + QK + Q+RA ++ +++DLC A +W L + + +GL G S GLL + Sbjct: 86 DARVRWMSVLSNVADQLYYPCEHIAWAADAELIKTK---SDRWWVLSTGLWGASLVLGILRSIRSILILKRKAQKCHRSGSAESREEVFSQKAALKRQIRAELFSILSSSADLCNAVHWMPPGFLWAGRFPPWLVGLMGTASSLIGLLQT 232
BLAST of mRNA_M-pyrifera_M_contig102080.448.1 vs. uniprot
Match: A0A498MMV5_LABRO (FYN-binding-like isoform X1 n=1 Tax=Labeo rohita TaxID=84645 RepID=A0A498MMV5_LABRO) HSP 1 Score: 60.5 bits (145), Expect = 6.260e-8 Identity = 45/143 (31.47%), Postives = 73/143 (51.05%), Query Frame = 1 Query: 1 DSLQQLLSWTRTVSMLLYYPLEHLAWAKDAGVIRSKRVDSATLWVLSCRLWLLYVIAQITSRLLTLNTLSREIR--RRDLSYDQKRDCRAQLRANRLQLVCNASDLCLAGNWS----LRSSPLGDFSIGLCGAVGSAAGLLHS 411 D+L + +S V+ LYYP EH+AWA DA ++++K S WVLS LW +I I + + L R+ + +R+ ++ QK R Q+R ++ + +DL A +W L + + +GL G S GLL + Sbjct: 531 DALVRWMSVLSNVADQLYYPCEHIAWAADAQLVKTK---SDRWWVLSTGLWGASLILSILRSVRNILILKRKAQTCQREEAFSQKAALRRQIRGEAFSILSSLADLGNAVHWMPPGFLWAGRFPPWLVGLMGTTSSLIGLLQT 670
BLAST of mRNA_M-pyrifera_M_contig102080.448.1 vs. uniprot
Match: A0A498LJU2_LABRO (Solute carrier family 35 member E1-like protein n=1 Tax=Labeo rohita TaxID=84645 RepID=A0A498LJU2_LABRO) HSP 1 Score: 60.5 bits (145), Expect = 6.560e-8 Identity = 45/143 (31.47%), Postives = 73/143 (51.05%), Query Frame = 1 Query: 1 DSLQQLLSWTRTVSMLLYYPLEHLAWAKDAGVIRSKRVDSATLWVLSCRLWLLYVIAQITSRLLTLNTLSREIR--RRDLSYDQKRDCRAQLRANRLQLVCNASDLCLAGNWS----LRSSPLGDFSIGLCGAVGSAAGLLHS 411 D+L + +S V+ LYYP EH+AWA DA ++++K S WVLS LW +I I + + L R+ + +R+ ++ QK R Q+R ++ + +DL A +W L + + +GL G S GLL + Sbjct: 907 DALVRWMSVLSNVADQLYYPCEHIAWAADAQLVKTK---SDRWWVLSTGLWGASLILSILRSVRNILILKRKAQTCQREEAFSQKAALRRQIRGEAFSILSSLADLGNAVHWMPPGFLWAGRFPPWLVGLMGTTSSLIGLLQT 1046
BLAST of mRNA_M-pyrifera_M_contig102080.448.1 vs. uniprot
Match: A0A261XUH5_9FUNG (Uncharacterized protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261XUH5_9FUNG) HSP 1 Score: 59.7 bits (143), Expect = 7.250e-8 Identity = 42/142 (29.58%), Postives = 72/142 (50.70%), Query Frame = 1 Query: 31 RTVSMLLYYPLEHLAWAKDAGVIRSKRVDSATLWVLSCRLWLLYVIAQITS-----RLLTLN--TLSREIRRRDLSYDQ---KRDCRAQLRANRLQL----VCNASDLCLAGNWSLRSSPLGDFSIGLCGAVGSAAGLLHSF 414 + +SMLLYYP+EH+ W +I S + + SCR W YV+ + RLL + T+ ++I+R L D+ K +L A +++ + NA+ L L +WSL S D ++G+CG + + L+ ++ Sbjct: 126 QNLSMLLYYPMEHIYWLGAHRIIPLSEQKSNKIAMWSCRFWAAYVVLEFARLAEEWRLLKVKEVTIQKKIKRDLLQTDKGETKEKVLGELEAAKMRTKIGTIVNAAYLPLTVHWSLEQSSFPDVAVGVCGTLAAIGQLMTAW 267
BLAST of mRNA_M-pyrifera_M_contig102080.448.1 vs. uniprot
Match: UPI002013CF65 (peroxisomal membrane protein 11C n=1 Tax=Megalobrama amblycephala TaxID=75352 RepID=UPI002013CF65) HSP 1 Score: 58.2 bits (139), Expect = 2.100e-7 Identity = 45/153 (29.41%), Postives = 76/153 (49.67%), Query Frame = 1 Query: 1 DSLQQLLSWTRTVSMLLYYPLEHLAWAKDAGVIRSKRVDSATLWVLSCRLWLLYVIAQITSRLLTLNTLSREIRR---------RDLSYDQKRDCRAQLRANRLQLVCNASDLCLAGNWS----LRSSPLGDFSIGLCGAVGSAAGLLHSFTS 420 D+L + +S V+ LYYP EH+AWA DA +I++K S WVLS W + +I I + ++ L ++++ R+ ++ Q+ R Q+R ++ + +DL A +W L + + +GL G V S GLL +S Sbjct: 86 DALVRWMSILTNVADQLYYPCEHIAWAADAELIKTK---SDRWWVLSTGFWGMSLILSILRSIRSILILKGKVQKCQRSGSADSREEAFSQRAALRRQIRGEVFSILSSMADLSNAIHWMPPGFLWAGRFPPWLVGLMGTVSSLIGLLQMSSS 235
BLAST of mRNA_M-pyrifera_M_contig102080.448.1 vs. uniprot
Match: A0A672M6N4_SINGR (Peroxisomal biogenesis factor 11 gamma n=11 Tax=Cyprinidae TaxID=7953 RepID=A0A672M6N4_SINGR) HSP 1 Score: 57.8 bits (138), Expect = 3.040e-7 Identity = 45/149 (30.20%), Postives = 73/149 (48.99%), Query Frame = 1 Query: 1 DSLQQLLSWTRTVSMLLYYPLEHLAWAKDAGVIRSKRVDSATLWVLSCRLWLLYVIAQITSRLLTLNTLSREIRR---------RDLSYDQKRDCRAQLRANRLQLVCNASDLCLAGNWS----LRSSPLGDFSIGLCGAVGSAAGLLH 408 D+L + +S V+ LYYP EH+AWA DA +I++K S WVLS LW + +I I + ++ L R+ + R+ ++ QK + Q+R ++ + +DL A +W L + + +GL G S GLL Sbjct: 92 DALVRWMSILNNVADQLYYPCEHIAWAADAELIKTK---SDRWWVLSTGLWGISLILSILRSIRSIQILKRKSQTCQRSASAESREEAFSQKAVLQRQIRGEVFSILSSLADLSNAIHWMPPGFLWAGRFPPWLVGLMGTTSSLIGLLQ 237
BLAST of mRNA_M-pyrifera_M_contig102080.448.1 vs. uniprot
Match: A0A6P8S8L8_GEOSA (peroxisomal membrane protein 11C isoform X2 n=1 Tax=Geotrypetes seraphini TaxID=260995 RepID=A0A6P8S8L8_GEOSA) HSP 1 Score: 57.4 bits (137), Expect = 3.940e-7 Identity = 42/128 (32.81%), Postives = 64/128 (50.00%), Query Frame = 1 Query: 49 LYYPLEHLAWAKDAGVIRSKRVDSATLWVLSCRLWLLYVIAQITSRLLTLNTLSREIRRR------DLSYDQKRDCRAQLRANRLQLVCNASDLCLAGNWS----LRSSPLGDFSIGLCGAVGSAAGL 402 LYYP EH+AWA DA VIR+K S W S LW L ++ I L L L+R +R+ +LS+ ++ +++ L ++ N +DL A NW L + + +GL G + S G+ Sbjct: 103 LYYPCEHIAWAADAKVIRTK---SDKWWTFSTALWGLSLLLGILRSLRILCMLTRRLRKEKRHSFGELSHLKRVQLNTLVQSEALTIMSNLADLANAVNWMPPGFLWAGQFPPWLVGLMGTISSLIGI 227
BLAST of mRNA_M-pyrifera_M_contig102080.448.1 vs. uniprot
Match: A0A8B9F651_9PSIT (Uncharacterized protein n=1 Tax=Amazona collaria TaxID=241587 RepID=A0A8B9F651_9PSIT) HSP 1 Score: 56.2 bits (134), Expect = 9.620e-7 Identity = 39/112 (34.82%), Postives = 62/112 (55.36%), Query Frame = 1 Query: 1 DSLQQLLSWTRTVSMLLYYPLEHLAWAKDAGVIRSKRVDSATLWVLSCRLWLLYVIAQITSRLLTLNTLSREIRRRDLSYD--QKRDCRAQLRANRLQLVCNASDLCLAGNW 330 D L + LS ++ LYYP EH+AWA DAG+IR++ + W LS LW L ++ I L L L R++R+ S +++ +AQ++A L ++ +DL A +W Sbjct: 88 DGLVRALSVLCNMANQLYYPCEHIAWAADAGIIRTR---AQKWWTLSTGLWALSLLLGILRSLRILCQL-RKLRQHKWSSSPQSQKEAKAQVKAEVLSILAQMADLSNAIHW 195
BLAST of mRNA_M-pyrifera_M_contig102080.448.1 vs. uniprot
Match: A0A3N0YPU9_ANAGA (Peroxisomal membrane protein 11C n=1 Tax=Anabarilius grahami TaxID=495550 RepID=A0A3N0YPU9_ANAGA) HSP 1 Score: 57.0 bits (136), Expect = 1.010e-6 Identity = 45/144 (31.25%), Postives = 68/144 (47.22%), Query Frame = 1 Query: 1 DSLQQLLSWTRTVSMLLYYPLEHLAWAKDAGVIRSKRVDSATLWVLSCRLWLLYVIAQITSRLLTLNTLSREIRRRDLSYDQKRDCRAQLRANRLQLVCNASDLCLAGNWS----LRSSPLGDFSIGLCGAVGSAAGLLHSFTS 420 D+L + +S V+ LYYP EH+AWA DA +I++K S WVLS W + +I I R+ ++ QK R Q+R ++ + +DL A +W L + + +GL G V S GLL +S Sbjct: 551 DALVRWMSILTNVADQLYYPCEHIAWAADAELIKTK---SDRWWVLSTGFWGMSLILSIF---------------REEAFSQKAALRRQIRGEVFSILSSLADLSNAVHWMPPGFLWAGRFPPWLVGLMGTVSSLIGLLQMSSS 676 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102080.448.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig102080.448.1 >prot_M-pyrifera_M_contig102080.448.1 ID=prot_M-pyrifera_M_contig102080.448.1|Name=mRNA_M-pyrifera_M_contig102080.448.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=141bp DSLQQLLSWTRTVSMLLYYPLEHLAWAKDAGVIRSKRVDSATLWVLSCRLback to top mRNA from alignment at M-pyrifera_M_contig102080:19..441+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig102080.448.1 ID=mRNA_M-pyrifera_M_contig102080.448.1|Name=mRNA_M-pyrifera_M_contig102080.448.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=423bp|location=Sequence derived from alignment at M-pyrifera_M_contig102080:19..441+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig102080:19..441+ >mRNA_M-pyrifera_M_contig102080.448.1 ID=mRNA_M-pyrifera_M_contig102080.448.1|Name=mRNA_M-pyrifera_M_contig102080.448.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=846bp|location=Sequence derived from alignment at M-pyrifera_M_contig102080:19..441+ (Macrocystis pyrifera P11B4 male)back to top |