mRNA_M-pyrifera_M_contig102078.447.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig102078.447.1
Unique NamemRNA_M-pyrifera_M_contig102078.447.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig102078.447.1 vs. uniprot
Match: A0A7S4ILZ7_9EUKA (Probable imidazolonepropionase n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4ILZ7_9EUKA)

HSP 1 Score: 176 bits (445), Expect = 1.420e-52
Identity = 89/118 (75.42%), Postives = 101/118 (85.59%), Query Frame = 1
Query:    4 QIPALVQQREEGLVSPANIDVFLEKGVFNREETKEILEAGEKVGLTLNFHGDEINPMQSGELAGELKALAVSHLERVSDEGIAAMAELPSFAVLLPTTAYILRLEPPPARKLIAGSAP 357
            Q+P L + +E G +SP+NIDVFLEKGVF REET+EILEAG+ +GL LNFHGDEINPMQSGELAGEL ALAVSHLERVS+EG+ AMA+ P+FA LLPTTAYILRLEPPPAR LI    P
Sbjct:   80 QLPELKKLQENGEISPSNIDVFLEKGVFGREETREILEAGKSMGLELNFHGDEINPMQSGELAGELGALAVSHLERVSEEGMKAMAKKPTFATLLPTTAYILRLEPPPARDLIEHGVP 197          
BLAST of mRNA_M-pyrifera_M_contig102078.447.1 vs. uniprot
Match: A0A2P6NSQ7_9EUKA (Probable imidazolonepropionase n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NSQ7_9EUKA)

HSP 1 Score: 172 bits (437), Expect = 1.150e-49
Identity = 87/118 (73.73%), Postives = 100/118 (84.75%), Query Frame = 1
Query:    4 QIPALVQQREEGLVSPANIDVFLEKGVFNREETKEILEAGEKVGLTLNFHGDEINPMQSGELAGELKALAVSHLERVSDEGIAAMAELPSFAVLLPTTAYILRLEPPPARKLIAGSAP 357
            QIP L+++REEG +SP NIDVFLEKGVF  E+TK+ILEAG+  GL LNFHGDEI+PM SG+L GEL A A+SHLERV DEGI AMA+ P+ AVLLPTTAYILRLEPPPARKLI G+ P
Sbjct:  242 QIPELMRRREEGKISPRNIDVFLEKGVFEGEDTKKILEAGKTAGLLLNFHGDEIHPMCSGQLGGELGAAAISHLERVDDEGIIAMAKKPTVAVLLPTTAYILRLEPPPARKLIEGNVP 359          
BLAST of mRNA_M-pyrifera_M_contig102078.447.1 vs. uniprot
Match: A0A8J4PNA5_9MYCE (Probable imidazolonepropionase n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PNA5_9MYCE)

HSP 1 Score: 153 bits (387), Expect = 1.470e-42
Identity = 75/118 (63.56%), Postives = 98/118 (83.05%), Query Frame = 1
Query:    4 QIPALVQQREEGLVSPANIDVFLEKGVFNREETKEILEAGEKVGLTLNFHGDEINPMQSGELAGELKALAVSHLERVSDEGIAAMAELPSFAVLLPTTAYILRLEPPPARKLIAGSAP 357
            Q+P L + R+ G +SP+NIDVFLEKG +  ++TK ILE G+K+GL +NFHGDE++ M+SGELAGELKA A+SHLE+VS+EG+ AMA++P+F VLLPTTAYILRLE PPAR++I    P
Sbjct:  210 QLPELKRLRDLGEISPSNIDVFLEKGFYEYDDTKRILEEGQKLGLEINFHGDELSFMRSGELAGELKARAISHLEKVSEEGMKAMAQVPTFGVLLPTTAYILRLECPPARRMIELGVP 327          
BLAST of mRNA_M-pyrifera_M_contig102078.447.1 vs. uniprot
Match: D3BB71_POLPP (Probable imidazolonepropionase n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BB71_POLPP)

HSP 1 Score: 153 bits (387), Expect = 1.530e-42
Identity = 74/118 (62.71%), Postives = 99/118 (83.90%), Query Frame = 1
Query:    4 QIPALVQQREEGLVSPANIDVFLEKGVFNREETKEILEAGEKVGLTLNFHGDEINPMQSGELAGELKALAVSHLERVSDEGIAAMAELPSFAVLLPTTAYILRLEPPPARKLIAGSAP 357
            Q+P L + R+ G +SP NIDVFLE+G F  ++TK ILEAG+++GL +NFHGDE++ M+SGELAGELKA A+SHLE+VS+EG+  MA++P+FAVLLPTTAY+LRLE PPAR++I  + P
Sbjct:  209 QLPELKRLRDAGEISPENIDVFLERGFFEYDDTKRILEAGQQLGLAINFHGDELSFMKSGELAGELKARAISHLEKVSEEGMLEMAKVPTFAVLLPTTAYVLRLECPPARRMIELNVP 326          
BLAST of mRNA_M-pyrifera_M_contig102078.447.1 vs. uniprot
Match: Q4CLJ4_TRYCC (Probable imidazolonepropionase (Fragment) n=5 Tax=Trypanosoma cruzi TaxID=5693 RepID=Q4CLJ4_TRYCC)

HSP 1 Score: 148 bits (374), Expect = 1.900e-42
Identity = 73/118 (61.86%), Postives = 93/118 (78.81%), Query Frame = 1
Query:    4 QIPALVQQREEGLVSPANIDVFLEKGVFNREETKEILEAGEKVGLTLNFHGDEINPMQSGELAGELKALAVSHLERVSDEGIAAMAELPSFAVLLPTTAYILRLEPPPARKLIAGSAP 357
            Q+PA++Q+R EG     NIDVF E G F+ ++++ +LEAG K GL +NFHGDE++ + SGELAGEL+A AVSHLE VSDEGIA M++ P+FAVLLP TAY+LR+ PPPARKLI G  P
Sbjct:   26 QLPAVMQERAEGRNDVQNIDVFCEIGAFDHDQSRRVLEAGRKSGLMINFHGDELSYVASGELAGELEAQAVSHLEHVSDEGIACMSKRPTFAVLLPMTAYVLRIAPPPARKLIDGHVP 143          
BLAST of mRNA_M-pyrifera_M_contig102078.447.1 vs. uniprot
Match: UPI000644828C (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644828C)

HSP 1 Score: 152 bits (385), Expect = 3.060e-42
Identity = 76/118 (64.41%), Postives = 96/118 (81.36%), Query Frame = 1
Query:    4 QIPALVQQREEGLVSPANIDVFLEKGVFNREETKEILEAGEKVGLTLNFHGDEINPMQSGELAGELKALAVSHLERVSDEGIAAMAELPSFAVLLPTTAYILRLEPPPARKLIAGSAP 357
            Q+P L + R+ G +SPANIDVFLEKG F  E+TK IL+AG+++GL +NFHGDE++ M+SGELAGELKA A SHLE VS+EG+ AMA +P+F VLLPTTAY+LRLE PPAR++I    P
Sbjct:  212 QLPELKRLRDAGEISPANIDVFLEKGFFEYEDTKRILQAGQQLGLAINFHGDELSYMKSGELAGELKARASSHLELVSEEGMKAMAAVPTFGVLLPTTAYVLRLECPPARRMIELGVP 329          
BLAST of mRNA_M-pyrifera_M_contig102078.447.1 vs. uniprot
Match: F1A164_DICPU (Probable imidazolonepropionase n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F1A164_DICPU)

HSP 1 Score: 152 bits (384), Expect = 4.220e-42
Identity = 76/118 (64.41%), Postives = 97/118 (82.20%), Query Frame = 1
Query:    4 QIPALVQQREEGLVSPANIDVFLEKGVFNREETKEILEAGEKVGLTLNFHGDEINPMQSGELAGELKALAVSHLERVSDEGIAAMAELPSFAVLLPTTAYILRLEPPPARKLIAGSAP 357
            Q+P L + ++ G +SP+NIDVFLEKG F  E+TK+ILEAG+++GL LNFHGDE++ M+SGELAGEL A A+SHLE+VS+EG+  MA  P+FAVLLPTTAYILRLE PPAR++I    P
Sbjct:  210 QLPELKRLKDAGEISPSNIDVFLEKGFFEYEDTKKILEAGKQLGLELNFHGDELSYMKSGELAGELGARAISHLEKVSEEGMKTMAATPTFAVLLPTTAYILRLECPPARRMIELGVP 327          
BLAST of mRNA_M-pyrifera_M_contig102078.447.1 vs. uniprot
Match: L8GUH2_ACACA (Probable imidazolonepropionase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GUH2_ACACA)

HSP 1 Score: 152 bits (384), Expect = 5.350e-42
Identity = 83/136 (61.03%), Postives = 99/136 (72.79%), Query Frame = 1
Query:    1 DQIPALVQQREEGLVSPANIDVFLEKGVFNREETK-----------------EILEAGEKVGLTLNFHGDEINPMQSGELAGELKALAVSHLERVSDEGIAAMAELPSFAVLLPTTAYILRLEPPPARKLIAGSAP 357
            +QIPAL +   +G +SP  IDVFLEKGVF++ +TK                  ILEAG++ GL LNFHGDEIN M +GEL GEL AL++SHLERVSDEGIAAMA++P+FAVLLPTTAYILRLE PPARK+I    P
Sbjct:  210 NQIPALKELAAKGEISPELIDVFLEKGVFDQAQTKYNSGLNLSTLPRDLRLGRILEAGKEAGLLLNFHGDEINYMNAGELGGELGALSISHLERVSDEGIAAMAKVPTFAVLLPTTAYILRLEHPPARKMIEAGVP 345          
BLAST of mRNA_M-pyrifera_M_contig102078.447.1 vs. uniprot
Match: A0A1X0NED8_9TRYP (Imidazolonepropionase n=1 Tax=Trypanosoma theileri TaxID=67003 RepID=A0A1X0NED8_9TRYP)

HSP 1 Score: 151 bits (382), Expect = 8.950e-42
Identity = 74/118 (62.71%), Postives = 94/118 (79.66%), Query Frame = 1
Query:    4 QIPALVQQREEGLVSPANIDVFLEKGVFNREETKEILEAGEKVGLTLNFHGDEINPMQSGELAGELKALAVSHLERVSDEGIAAMAELPSFAVLLPTTAYILRLEPPPARKLIAGSAP 357
            Q+PA++ +R  GL    NIDVF E GVF+R++T+ IL AG+ VGL LNFHGDE+ P+ +GELAGEL+A AVSHLE +SDEGI AM + PSFAVLLP TAY+LR++PPPAR++I G  P
Sbjct:  210 QLPAVLAERAAGLNDVRNIDVFCETGVFDRDQTRVILTAGKNVGLALNFHGDELTPVGAGELAGELEADAVSHLEHISDEGIVAMRKKPSFAVLLPMTAYVLRIQPPPARRIIDGHVP 327          
BLAST of mRNA_M-pyrifera_M_contig102078.447.1 vs. uniprot
Match: F4PHE0_CAVFA (Probable imidazolonepropionase n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PHE0_CAVFA)

HSP 1 Score: 151 bits (381), Expect = 1.080e-41
Identity = 74/119 (62.18%), Postives = 94/119 (78.99%), Query Frame = 1
Query:    1 DQIPALVQQREEGLVSPANIDVFLEKGVFNREETKEILEAGEKVGLTLNFHGDEINPMQSGELAGELKALAVSHLERVSDEGIAAMAELPSFAVLLPTTAYILRLEPPPARKLIAGSAP 357
            +Q+P L + R  G +SPANIDVFLEKG F  ++T+ ILEAG+ +GL +NFHGDE++ M SGELAGELKA A+SHLE+VS+EG+  MA  P+F VLLPTTAY+LRLE PPAR++I    P
Sbjct:  208 NQLPELARLRAAGEISPANIDVFLEKGFFELDDTRRILEAGKALGLEINFHGDELSYMASGELAGELKARAISHLEKVSEEGMKTMAATPTFGVLLPTTAYVLRLEAPPARRMIELGVP 326          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102078.447.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4ILZ7_9EUKA1.420e-5275.42Probable imidazolonepropionase n=1 Tax=Vannella sp... [more]
A0A2P6NSQ7_9EUKA1.150e-4973.73Probable imidazolonepropionase n=1 Tax=Planoprotos... [more]
A0A8J4PNA5_9MYCE1.470e-4263.56Probable imidazolonepropionase n=1 Tax=Polysphondy... [more]
D3BB71_POLPP1.530e-4262.71Probable imidazolonepropionase n=1 Tax=Polysphondy... [more]
Q4CLJ4_TRYCC1.900e-4261.86Probable imidazolonepropionase (Fragment) n=5 Tax=... [more]
UPI000644828C3.060e-4264.41hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
F1A164_DICPU4.220e-4264.41Probable imidazolonepropionase n=1 Tax=Dictyosteli... [more]
L8GUH2_ACACA5.350e-4261.03Probable imidazolonepropionase n=1 Tax=Acanthamoeb... [more]
A0A1X0NED8_9TRYP8.950e-4262.71Imidazolonepropionase n=1 Tax=Trypanosoma theileri... [more]
F4PHE0_CAVFA1.080e-4162.18Probable imidazolonepropionase n=1 Tax=Cavenderia ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig102078contigM-pyrifera_M_contig102078:163..519 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score152.9
Seed ortholog evalue9.3e-35
Seed eggNOG ortholog5786.XP_003293407.1
Preferred nameAMDHD1
KEGG rclassRC00683
KEGG koko:K01468
KEGG ReactionR02288
KEGG Pathwayko00340,ko01100,map00340,map01100
KEGG ModuleM00045
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006548,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009987,GO:0016054,GO:0016787,GO:0016810,GO:0016812,GO:0019439,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0046483,GO:0046700,GO:0052803,GO:0052805,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606
EggNOG free text desc.Amidohydrolase family
EggNOG OGs3XDT6@554915,COG0402@1,KOG3968@2759
EC3.5.2.7
COG Functional cat.E
Best tax levelAmoebozoa
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size357
Cds size357
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815521.601209-CDS-M-pyrifera_M_contig102078:162..5191622815521.601209-CDS-M-pyrifera_M_contig102078:162..519Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig102078 163..519 +
1692277448.2216775-CDS-M-pyrifera_M_contig102078:162..5191692277448.2216775-CDS-M-pyrifera_M_contig102078:162..519Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig102078 163..519 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig102078.447.1prot_M-pyrifera_M_contig102078.447.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig102078 163..519 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig102078.447.1

>prot_M-pyrifera_M_contig102078.447.1 ID=prot_M-pyrifera_M_contig102078.447.1|Name=mRNA_M-pyrifera_M_contig102078.447.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=119bp
DQIPALVQQREEGLVSPANIDVFLEKGVFNREETKEILEAGEKVGLTLNF
HGDEINPMQSGELAGELKALAVSHLERVSDEGIAAMAELPSFAVLLPTTA
YILRLEPPPARKLIAGSAP
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mRNA from alignment at M-pyrifera_M_contig102078:163..519+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig102078.447.1 ID=mRNA_M-pyrifera_M_contig102078.447.1|Name=mRNA_M-pyrifera_M_contig102078.447.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=357bp|location=Sequence derived from alignment at M-pyrifera_M_contig102078:163..519+ (Macrocystis pyrifera P11B4 male)
GACCAGATTCCTGCGCTGGTGCAGCAGCGGGAGGAGGGCCTTGTGTCGCC TGCGAACATCGACGTCTTCCTCGAGAAGGGAGTCTTCAACAGGGAGGAAA CAAAGGAAATCCTCGAGGCTGGCGAGAAGGTTGGCCTCACGCTGAACTTC CACGGCGACGAAATCAATCCCATGCAATCTGGAGAGTTGGCAGGAGAGCT CAAGGCCCTTGCTGTTTCACACTTGGAGAGAGTGAGCGATGAGGGCATTG CGGCCATGGCAGAGCTGCCCTCCTTTGCAGTGCTGCTGCCCACCACCGCC TACATCCTCCGCCTCGAGCCGCCCCCCGCCCGCAAGCTCATCGCTGGCAG TGCGCCC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig102078:163..519+

>mRNA_M-pyrifera_M_contig102078.447.1 ID=mRNA_M-pyrifera_M_contig102078.447.1|Name=mRNA_M-pyrifera_M_contig102078.447.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=714bp|location=Sequence derived from alignment at M-pyrifera_M_contig102078:163..519+ (Macrocystis pyrifera P11B4 male)
GACCAGATTCCTGCGCTGGTGCAGCAGCGGGAGGAGGGCCTTGTGTCGCC
TGCGAACATCGACGTCTTCCTCGAGAAGGGAGTCTTCAACAGGGAGGAAA
CAAAGGAAATCCTCGAGGCTGGCGAGAAGGTTGGCCTCACGCTGAACTTC
CACGGCGACGAAATCAATCCCATGCAATCTGGAGAGTTGGCAGGAGAGCT
CAAGGCCCTTGCTGTTTCACACTTGGAGAGAGTGAGCGATGAGGGCATTG
CGGCCATGGCAGAGCTGCCCTCCTTTGCAGTGCTGCTGCCCACCACCGCC
TACATCCTCCGCCTCGAGCCGCCCCCCGCCCGCAAGCTCATCGCTGGCAG
TGCGCCCGACCAGATTCCTGCGCTGGTGCAGCAGCGGGAGGAGGGCCTTG
TGTCGCCTGCGAACATCGACGTCTTCCTCGAGAAGGGAGTCTTCAACAGG
GAGGAAACAAAGGAAATCCTCGAGGCTGGCGAGAAGGTTGGCCTCACGCT
GAACTTCCACGGCGACGAAATCAATCCCATGCAATCTGGAGAGTTGGCAG
GAGAGCTCAAGGCCCTTGCTGTTTCACACTTGGAGAGAGTGAGCGATGAG
GGCATTGCGGCCATGGCAGAGCTGCCCTCCTTTGCAGTGCTGCTGCCCAC
CACCGCCTACATCCTCCGCCTCGAGCCGCCCCCCGCCCGCAAGCTCATCG
CTGGCAGTGCGCCC
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