mRNA_M-pyrifera_M_contig102075.446.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig102075.446.1 vs. uniprot
Match: UPI001CE04870 (alpha-glucosidase n=2 Tax=Pseudomonas sp. PDM16 TaxID=2769292 RepID=UPI001CE04870) HSP 1 Score: 102 bits (255), Expect = 1.310e-22 Identity = 61/147 (41.50%), Postives = 84/147 (57.14%), Query Frame = 1 Query: 4 GGGEQFTRLQLDGSALPVLTREKGTGRGLQPISWYLNQQTAGKGGSWEYSYAALPWLLSASGRGVLVEGDAFVHLDATRAWQDGVVEVAVNSSSVAVRLIAATSPLRALRALTAYTGRMQPLPAWSQRGAILGLEFGSGSVEAAVEQ 444 G GEQF+ L G LP+L +E+G GRGLQPI++ N TA GG W SYA +P LS+ GR E A+ D + V++ V++ +A R+ A + TA GRM PLPAW+QRGAI+GL+ G+ V ++Q Sbjct: 185 GFGEQFSAFDLTGRRLPILVQEQGVGRGLQPITFAANL-TARAGGDWWTSYAPVPHYLSSKGRSFFSESGAYQVFDLRDKRR---VQLEVHAGQLAARIYTAADSAGQIAQHTAVVGRMPPLPAWTQRGAIVGLQGGTARVRGILDQ 327
BLAST of mRNA_M-pyrifera_M_contig102075.446.1 vs. uniprot
Match: A0A2D4SL37_9DELT (Alpha-glucosidase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2D4SL37_9DELT) HSP 1 Score: 101 bits (251), Expect = 4.440e-22 Identity = 54/142 (38.03%), Postives = 81/142 (57.04%), Query Frame = 1 Query: 1 FGGGEQFTRLQLDGSALPVLTREKGTGRGLQPISWYLNQQTAGKGGSWEYSYAALPWLLSASGRGVLVEGDAFVHLDATRAWQDGVVEVAVNSSSVAVRLIAATSPLRALRALTAYTGRMQPLPAWSQRGAILGLEFGSGSV 426 FG G Q ++L L GSALP+LTRE G GRG+QP+++++ ++ G GG W + A W LS G G+ +E + V LD + + ++S+ V +R+ +P L+ T + GR LP W GAI+GL+ GS V Sbjct: 111 FGCGTQLSKLNLKGSALPILTREPGIGRGVQPLTFFM-ERMFGAGGEWHCTSAPSAWFLSTQGFGICIENEELVQLDFENPTEH---RLTIHSAHVQLRIFYGNTPKEILKEYTKHIGRFPVLPDWFHNGAIIGLQGGSAKV 248
BLAST of mRNA_M-pyrifera_M_contig102075.446.1 vs. uniprot
Match: A0A4D9CX93_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CX93_9STRA) HSP 1 Score: 100 bits (249), Expect = 8.490e-22 Identity = 59/143 (41.26%), Postives = 81/143 (56.64%), Query Frame = 1 Query: 1 FGGGEQFTRLQLDGSALPVLTREKGTGRGLQPISWYLNQQTAGKGGSWEYSYAALPWLLSASGRGVLVEGDAFVHLDATRAWQDGVVEVAVNSSSVAVRLIAATSPLRALRALTAYTGRMQPLPAWSQRGAILGLEFGSGSVE 429 FG G+ ++R L G +PV+ E+G GRGLQP ++ LN G G +W +Y A P L++ GR + + G D T D V + S+ L +A SPL + L+ TGRMQPLPAW+QRG ++GLE GS VE Sbjct: 229 FGFGQHYSRWDLKGRRVPVIISEQGVGRGLQPTTFALNTFLHGVGSAWHTTYVAKPMYLTSRGRALSLVGPKVSFFDLT--LPDIVTAEYWSCRSMRGILYSAASPLETVALLSTETGRMQPLPAWTQRGVVVGLEGGSEEVE 369
BLAST of mRNA_M-pyrifera_M_contig102075.446.1 vs. uniprot
Match: A0A7C9LSG3_9DEIO (Alpha-glucosidase n=2 Tax=unclassified Deinococcus TaxID=2623546 RepID=A0A7C9LSG3_9DEIO) HSP 1 Score: 100 bits (248), Expect = 1.150e-21 Identity = 62/144 (43.06%), Postives = 82/144 (56.94%), Query Frame = 1 Query: 4 GGGEQFTRLQLDGSALPVLTREKGTGRGLQPISWYLNQQTAGKGGSWEYSYAALPWLLSASGRGVLVEGDAFVHLDATRAWQD---GVVEVAVNSSSVAVRLIAATSPLRALRALTAYTGRMQPLPAWSQRGAILGLEFGSGSV 426 GGGEQF+ L L G LPVL E+G GRG QP++W N G GG+W SYA +P L +G G + LD D G + + +S+ +RL AA + RALTA TGRM PLPAW+ +GA+LG++ G+ V Sbjct: 179 GGGEQFSTLNLRGRRLPVLVSEQGVGRGQQPLTWLANLTNNGAGGAWHSSYAPMPHLRLLDDQG---SGQSIWSLDTVPGALDTRGGRWRLEMTGASLHLRL-AAGNTRTLTRALTADTGRMAPLPAWTSQGALLGVQGGTARV 318
BLAST of mRNA_M-pyrifera_M_contig102075.446.1 vs. uniprot
Match: UPI0011EDF2D4 (alpha-glucosidase n=1 Tax=Actinomadura sp. K4S16 TaxID=1316147 RepID=UPI0011EDF2D4) HSP 1 Score: 99.0 bits (245), Expect = 2.910e-21 Identity = 58/147 (39.46%), Postives = 84/147 (57.14%), Query Frame = 1 Query: 4 GGGEQFTRLQLDGSALPVLTREKGTGRGLQPISWYLNQQTAGKGGSWEYSYAALPWLLSASGRGVLVEGDAFVHLDATRAWQDGVVEVAVNSSSVAVRLIAATSPLRALRALTAYTGRMQPLPAWSQRGAILGLEFGSGSVEAAVEQ 444 G GEQFT L G +PV+ RE+G GRG QP++ ++ +G+GGSW+ +YA +P+ ++S RG + G + LD +R G+ L A SP L A TA TGRM LPAW++ GA+LGL+ G+ V V++ Sbjct: 188 GFGEQFTSFDLAGRRIPVIVREQGIGRGRQPLTAMVDL-VSGQGGSWDTTYAPIPFYATSSNRGFALTGGRYSVLDLSRP---GLAVAQTWGPRQGAELYAGASPAEVLAAHTASTGRMGALPAWTRDGAVLGLQGGTARVRRIVDE 330
BLAST of mRNA_M-pyrifera_M_contig102075.446.1 vs. uniprot
Match: UPI001658EAD5 (alpha-glucosidase n=1 Tax=Pseudomonas alcaligenes TaxID=43263 RepID=UPI001658EAD5) HSP 1 Score: 97.4 bits (241), Expect = 1.000e-20 Identity = 60/147 (40.82%), Postives = 82/147 (55.78%), Query Frame = 1 Query: 4 GGGEQFTRLQLDGSALPVLTREKGTGRGLQPISWYLNQQTAGKGGSWEYSYAALPWLLSASGRGVLVEGDAFVHLDATRAWQDGVVEVAVNSSSVAVRLIAATSPLRALRALTAYTGRMQPLPAWSQRGAILGLEFGSGSVEAAVEQ 444 G GEQF+ L G LP+L +E+G GRGLQPI+ N TA GG W SYA +P LS+ GR E A+ D + V++ V++ +A R+ A + TA GRM PLPAW+Q+GAI+GL+ G+ V + Q Sbjct: 180 GFGEQFSAFDLAGRRLPILVQEQGVGRGLQPITLAANL-TARAGGDWWTSYAPVPHYLSSKGRSFFSESTAYQVFDLRDEHR---VQLEVHAGQLAARIYTAADAPGQIAQHTAVVGRMPPLPAWTQQGAIVGLQGGTQRVREILRQ 322
BLAST of mRNA_M-pyrifera_M_contig102075.446.1 vs. uniprot
Match: UPI00083585A5 (alpha-glucosidase n=1 Tax=Actinomadura hibisca TaxID=68565 RepID=UPI00083585A5) HSP 1 Score: 97.1 bits (240), Expect = 1.370e-20 Identity = 57/146 (39.04%), Postives = 85/146 (58.22%), Query Frame = 1 Query: 4 GGGEQFTRLQLDGSALPVLTREKGTGRGLQPISWYLNQQTAGKGGSWEYSYAALPWLLSASGRGVLVEGDAFVHLDATRAWQDGVVEVAVNSSSVAVRLIAATSPLRALRALTAYTGRMQPLPAWSQRGAILGLEFGSGSVEAAVE 441 G GEQF L G +P+L RE+G GRG QP++ +N +G+GGSW+ +YA +P+ L+++ RG + G + D + Q G+V ++ L SP + L A TA TG M+PLPAW+ GA+LGL+ G+ V V+ Sbjct: 188 GFGEQFAPFDLAGRRVPILVREQGIGRGRQPLTAMVNL-ASGQGGSWDTTYAPMPFYLTSARRGFELTGGRYSVFDLS---QPGLVVAQTWAARQDAELYTGASPAQVLAAHTASTGAMRPLPAWTGDGAVLGLQGGTARVRKIVD 329
BLAST of mRNA_M-pyrifera_M_contig102075.446.1 vs. uniprot
Match: UPI001F4D73D3 (alpha-glucosidase n=1 Tax=Pseudomonas sp. A3.4 TaxID=2919919 RepID=UPI001F4D73D3) HSP 1 Score: 96.7 bits (239), Expect = 1.860e-20 Identity = 60/142 (42.25%), Postives = 82/142 (57.75%), Query Frame = 1 Query: 1 FGGGEQFTRLQLDGSALPVLTREKGTGRGLQPISWYLNQQTAGKGGSWEYSYAALPWLLSASGRGVLVEGDAFVHLDATRAWQDGVVEVAVNSSSVAVRLIAATSPLRALRALTAYTGRMQPLPAWSQRGAILGLEFGSGSV 426 +G GEQFT L LP+L +E+G GRGL+PI+ N A GG W SYA +P LS+ R E A+ D RA D V++ V++S++A R+ P + A T+ GRM PLP W+QRGAILG++ G+ V Sbjct: 179 YGFGEQFTEFNLKRWRLPILVQEQGIGRGLEPITTGANLN-ARAGGDWWTSYAPVPHYLSSYMRSFFSESSAYQVFD-LRA--DDKVQLEVHASTLAARIYQGADPAALIEAHTSVVGRMPPLPDWTQRGAILGMQGGTAQV 316
BLAST of mRNA_M-pyrifera_M_contig102075.446.1 vs. uniprot
Match: A0A385Z5U4_9PSED (Alpha-glucosidase n=1 Tax=Pseudomonas cavernae TaxID=2320867 RepID=A0A385Z5U4_9PSED) HSP 1 Score: 96.7 bits (239), Expect = 1.860e-20 Identity = 59/142 (41.55%), Postives = 81/142 (57.04%), Query Frame = 1 Query: 1 FGGGEQFTRLQLDGSALPVLTREKGTGRGLQPISWYLNQQTAGKGGSWEYSYAALPWLLSASGRGVLVEGDAFVHLDATRAWQDGVVEVAVNSSSVAVRLIAATSPLRALRALTAYTGRMQPLPAWSQRGAILGLEFGSGSV 426 FG GEQFT L G LP+L +E+G GRGLQP++ N +A GG W SYA +P L++ R E A+ D + V++ V+ +A R+ A SP + A T+ GRM PLP W+QRGAI+GL+ G+ V Sbjct: 179 FGFGEQFTHFDLAGRRLPILVQEQGIGRGLQPLTLGANL-SARAGGDWWTSYAPVPHYLTSKLRSFFSESAAYQVFDLRDERR---VQLEVHEGQLAARIYAGDSPSALVEAHTSVVGRMPPLPDWTQRGAIVGLQGGTQRV 316
BLAST of mRNA_M-pyrifera_M_contig102075.446.1 vs. uniprot
Match: UPI000A5422ED (alpha-glucosidase n=1 Tax=Pseudomonas sp. ML96 TaxID=1523503 RepID=UPI000A5422ED) HSP 1 Score: 96.3 bits (238), Expect = 2.540e-20 Identity = 60/147 (40.82%), Postives = 81/147 (55.10%), Query Frame = 1 Query: 4 GGGEQFTRLQLDGSALPVLTREKGTGRGLQPISWYLNQQTAGKGGSWEYSYAALPWLLSASGRGVLVEGDAFVHLDATRAWQDGVVEVAVNSSSVAVRLIAATSPLRALRALTAYTGRMQPLPAWSQRGAILGLEFGSGSVEAAVEQ 444 G GEQF+ L G LP+L +E+G GRGL+PI+ N TA GG W SYA +P LS+ GR E A+ D + V++ V+ +A R+ A + + TA GRM PLP W+QRGAI+GL+ GS V + Q Sbjct: 177 GFGEQFSAFDLAGRRLPILVQEQGVGRGLEPITTAANL-TARAGGDWWTSYAPVPHYLSSKGRSFFSESAAYQVFDLRDEHR---VQLEVHEGRLAARIYTAANAPGQIAQHTAVVGRMPPLPDWTQRGAIVGLQGGSERVRGILHQ 319 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102075.446.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig102075.446.1 >prot_M-pyrifera_M_contig102075.446.1 ID=prot_M-pyrifera_M_contig102075.446.1|Name=mRNA_M-pyrifera_M_contig102075.446.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=148bp FGGGEQFTRLQLDGSALPVLTREKGTGRGLQPISWYLNQQTAGKGGSWEYback to top mRNA from alignment at M-pyrifera_M_contig102075:14..457- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig102075.446.1 ID=mRNA_M-pyrifera_M_contig102075.446.1|Name=mRNA_M-pyrifera_M_contig102075.446.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=444bp|location=Sequence derived from alignment at M-pyrifera_M_contig102075:14..457- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig102075:14..457- >mRNA_M-pyrifera_M_contig102075.446.1 ID=mRNA_M-pyrifera_M_contig102075.446.1|Name=mRNA_M-pyrifera_M_contig102075.446.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=888bp|location=Sequence derived from alignment at M-pyrifera_M_contig102075:14..457- (Macrocystis pyrifera P11B4 male)back to top |