|
Homology
BLAST of mRNA_M-pyrifera_M_contig10207.445.1 vs. uniprot
Match: A0A6H5KTW3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTW3_9PHAE) HSP 1 Score: 302 bits (774), Expect = 3.050e-82 Identity = 398/1254 (31.74%), Postives = 516/1254 (41.15%), Query Frame = 1
Query: 1 GALFRRGAIIRVHNAHPIYAAGGLVGLGACLRTSVQVVRFSPLAVNASYRPLAGGPSPVPLVAHAWRHAFKNAFLRPEFPPAQAPLAPSKINASV---------------SRPQDAPSSSVASGSVGRGAKIRRTAGAVDATAQAAPAXXXXXXXXXXXXXXDXXXXXXXXXXXXSS--PTAPPTPALAFKNAPTARDADMAATAG---RRRTGPGDGRNESRVGSGAGLVEEGRGGKGKG---------DSKRGGVI------EWEEHVYRWVFGRGSRSAWLPKRDVYAEFLNHPPGVCPIVDPA-----------ADGCSRCRRKSGLGDTVDNYRETIQSEKGHCFHSGGSQGGRMEGDGDEVGAAAAXXAASRDGVPALLLQRADEGWHGDLRDIDIVGGAADCAHAPPHLQHASRP----------PTPEAVLRAASRTLSECLEAS--QTRDTVPSLSRPALASAGXXXXXXXXXXXXXXXXXXVA--SAATAGPNATFTIRTPFGVDADRGDGVLGWLSLEGSG------GSSAPTAP-----------------PGGSRPPAFAAKGKGRPGKYVGPGEAVGSIFSAPL---------SVLPPPRAGT---------APEKSMWLRDRTAQAPVVLLRGPSPE--------TGTLSSSALVTSGGLGLLPSFTEGIGGAAAAPAGADRGRPRNRASG------GKGGPEILG*PVALALVRKFAICTEVVMLGAAAISRASGAVA---------------TAGAWTSSSAPEV-QKKMKRLTRPLQRDG---------------------------------RGGCQP-----------------LSAEALRVVGGAWVLLRSYLVVHARDMFVLYKRDGFGNGDGSSV-------------------------------------------------------------------------------------------------VAXXXXXXXXXXXXXXXFVVNSMPAADQASAGSRRKHAGNRSGAEGRLNLS---------------------LSVSEALVVRLASERIAAGGARAVGSGRGGSGESGGG----PRVASSHERESVTVSGLLREVGFRSVSTAFGAGAGSARTGREVAAAERTG----------------SGSVDMFDVLSRTKMQLCLTLEQGADRICVYLSLRRECWPASMIPGYSTVQVEGVCRKLSGNGKSVYLAVSRSGGGTVKV 2805
GA RRGA +RVHN HP+YA L+ LGACLRT+VQV+RFSPL NASYRPL GGP+P+PL HAWR +F FLR E AP+ + +P D + G + +G D + P XXXXXXXXXXXXXX XXXXXXXXX + P PP+P+ P++ TAG R R PG AG E G G+ KG D GG+ WEE V RWVFG R+ LPKRDVYAEFL+HPPGVC IVDP + GC RK + D ++ ++ K + G + G E G+ S D +L+QRADEGWHGD +I G A+ H SRP P+PE VLRAA+R+LSE LE + D VPS+ ++ XXXXXX VA SAA A NATFT+RTPFG A R +G+L WL + SG G +AP P RP AA + R GE + I AP S P R G+ + + +WL DRTA A V+LL P P +SA V G P E + A D G R +G G+G ++ LALVRK+A+CTEVV+LG A R++ A+A ++G++ +S+ V Q ++ R T ++ R G +P + E +R V G VL+RSYLVV A+D+ +L G NG S + ++ + AA + G + G SGA+ + L+ LSVSEAL+++LA+ P++AS HERES+ V GLLR VGFR+V+ G G+ R ++V A T + VDMF+VLS ++QLCLTLE AD+I VYL + E WP M+PG+ TVQVEGVCR+LSGNGKSVYLAV+R+GGGTV+V
Sbjct: 916 GAGLRRGANVRVHNVHPVYAGATLIALGACLRTTVQVLRFSPLGENASYRPLTGGPTPLPLAVHAWRQSFNAVFLRKEL---WAPMPRQQXXXXXXXXXXXXXXXXXXHFQQPPDGSRIGATVSTTPLGWSVSTASGTGDDHRRRTPXXXXXXXXXXXXXXXXXXXXXXXXXRATGTGLPRHPPSPS------PSSLQPSGFVTAGQLSRSRPSPGM----------AGGGEWGSDGETKGGTDTAAAGADFLTGGLAMAAMAATWEERVCRWVFGPDVRAMRLPKRDVYAEFLDHPPGVCGIVDPVDLAGLVGPAHESSGCDSRGRK--MPTKRDKEEKSAKTPKRGFYREGSCEVGYGGFTSAEDGSDGEAHILSDD---KMLIQRADEGWHGDSYGDEICSGGAN--------GHCSRPSCCCSCWSCRPSPEDVLRAAARSLSESLEVAVEHAADIVPSIMSRSILCGXXXXXXXESYAGSTGGKTAVARTSAAGAMKNATFTVRTPFGSRAGRAEGLLAWLHIPRSGKREQAKGEAAPXXXXXXXXXXXXXEVSTMESPLAERPDTVAAAVESRKQPN---GEKI--IHGAPSLRLSSKDNSSASPRARCGSDAATNSSLASTQACLWLEDRTAWARVMLLAAPRPSGPXXXXXXXXCAYASARVVDVAAG--PELAEVVSAAGRYSDDCDGGSQRGGQTGCDQGHPGRGDADVSA-DSTLALVRKYAVCTEVVVLGPAGSPRSTKALAKIAAPKDPSSLAGTASSGSFATSAKSSVAQGRVPRSTSSSKKTASPSPTHXXXXXXXXXXXXXXXXXXXXXXASSYARDGFRPPRTTSSRGDTAEWVGYTIPCETVRAVYGVRVLMRSYLVVEAKDVSLL---PGSINGKNSRTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASGGIERNKRDEAKNQRHCLDYVNAAAGTNLGFEHQRHGATSGADEQTALTGTKGKQKERDLSPRRPLAPRILSVSEALIIQLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKLASGHERESMVVRGLLRYVGFRTVAD----GGGNGRRRQKVLPAAVTAVKDQGHGIKGDLGASTTSEVDMFEVLSEERVQLCLTLEHAADKISVYLGVSPEAWPVGMVPGFCTVQVEGVCRRLSGNGKSVYLAVARAGGGTVRV 2122
BLAST of mRNA_M-pyrifera_M_contig10207.445.1 vs. uniprot
Match: D7G4W5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4W5_ECTSI) HSP 1 Score: 136 bits (342), Expect = 4.710e-29 Identity = 221/743 (29.74%), Postives = 284/743 (38.22%), Query Frame = 1
Query: 691 WEEHVYRWVFGRGSRSAWLPKRDVYAEFLNHPPGVCPIVDPA-----------ADGCSRCRRKSGLGDTVDNYRETIQSEKGHCFHSGGSQGGRMEGDGDEVGAAAAXXAASRDGVPALLLQRADEGWHGDLRDIDIVGGAAD--CAHAPPHLQHASRPPTPEAVLRAASRTLSECLEASQTRDTVPSLSRPALASAGXXXXXXXXXXXXXXXXXXVASAATAGPNATFTIRTPFGVDADRGDGVLGWLSLEGSGGSSAPTAPPGGSRPPAFAAKGKGRPGKYVGPGEAVGSIFSAPLSVLPPPRAGTAPEKSMWLRDRTAQAPVVLLRGPSPET--------GTLSSSALVTSGGLGLLPSFTEGIGGA------------AAAPAGADRGRPRNRASGGKGGPEILG*PVALALVRKFAICTEVVMLGAAAISRASGAVAT----------AGAWTS--------------------------------------------------SSAPEVQKKMKRLTRPLQRDGRGGCQPLSAEALRVVGGAWVLLRSYLVVHARDMFVLYKRDGFGNGDGSSVVAXXXXXXXXXXXXXXXFVVNS-------------MPAADQASAGSRRKHAGNRSGAEGRLNLS---------------------LSVSEALVVRLASERIAAGGARAVGSGRGGSGESG--------GGPRVASSHERESVTVSGLLREVGFRSVSTAFGAG 2514
WEE V RWVFG+ R+ L KRDVYAEFLNHPPGVC I+DP + GC CRR + D E ++ K + GG +G E G+ S D +L+QRADEGWHGD + +I G A+ C+ +S P+PE VLRAA+R LSE LE RP V S + P G + + G SL S ++ +P A G +A S L + + +WL DRTA A VVLL P P + G +S V +G P E + GA G D+G P G+G + LALVRK+A+CTEVV+LG R++ A AT AGA + SS P + R T G + E +R V G L+RSYLVV A+D+ +L + NG S XXXXXXXXXXXXXX N + AA + G +H G SG + + LS LSVSEAL+V+LA AAG GGP++AS HERES+ V GLLR+VGFR+V+ G G
Sbjct: 148 WEERVCRWVFGQDMRAMRLRKRDVYAEFLNHPPGVCGIIDPVDLVDLVGPAQDSSGCGSCRRN--MPTKRDQEEERPKTPKRGFYREGGYEGXXSGSTSAEDGSDGEAHILSDDD---MLIQRADEGWHGDSHEDEICSGGANGHCSRPSCCCSCSSCRPSPEEVLRAAARPLSESLEWRXXXXE----PRPFNRRKDCHGTNISSRSDEERHFHAVESR-----------KQPSGEKS-----IHGVPSLRPSSKDNSSASP------------------------RARGGSDAATNSSL------ASNQACLWLEDRTAWARVVLLAAPRPSSPSGATGAVGCAHASTRVVDVAVG--PELAEVVSGADRHSDDFDGDSQRGGQTGCDQGHP------GRGDAGVSA-DATLALVRKYAVCTEVVVLGPTGSPRSTKASATISALKDPSSLAGAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSYPRYGFRPPRTTSSPGDTAEGVGYTIPCETVRAVDGVRFLMRSYLVVEAKDVSLLPRSS---NGKNSRTXXXXXXXXXXXXXXXXGIERNKRDEATNQRHCLDYVNAAAGTNLGFEHQHHGATSGEDEQTALSGTTGKQKERDLSPRRPLVPRILSVSEALIVQLA----AAGAXXXXXXXXXXXXXXXXXXXXXXPGGPKLASGHERESMVVRGLLRDVGFRTVADGGGDG 819
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Exons | 9 |
Model size | 2805 |
Cds size | 1272 |
Stop | 1 |
Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622815521.391998-UTR-M-pyrifera_M_contig10207:1044..1152 | 1622815521.391998-UTR-M-pyrifera_M_contig10207:1044..1152 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig10207 1045..1152 + |
1692277448.0783312-UTR-M-pyrifera_M_contig10207:1044..1152 | 1692277448.0783312-UTR-M-pyrifera_M_contig10207:1044..1152 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig10207 1045..1152 + |
1622815521.4049993-UTR-M-pyrifera_M_contig10207:2487..2848 | 1622815521.4049993-UTR-M-pyrifera_M_contig10207:2487..2848 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig10207 2488..2848 + |
1692277448.0901117-UTR-M-pyrifera_M_contig10207:2487..2848 | 1692277448.0901117-UTR-M-pyrifera_M_contig10207:2487..2848 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig10207 2488..2848 + |
1622815521.4200695-UTR-M-pyrifera_M_contig10207:2947..3027 | 1622815521.4200695-UTR-M-pyrifera_M_contig10207:2947..3027 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig10207 2948..3027 + |
1692277448.1056595-UTR-M-pyrifera_M_contig10207:2947..3027 | 1692277448.1056595-UTR-M-pyrifera_M_contig10207:2947..3027 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig10207 2948..3027 + |
1622815521.5017247-UTR-M-pyrifera_M_contig10207:8676..9021 | 1622815521.5017247-UTR-M-pyrifera_M_contig10207:8676..9021 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig10207 8677..9021 + |
1692277448.1750968-UTR-M-pyrifera_M_contig10207:8676..9021 | 1692277448.1750968-UTR-M-pyrifera_M_contig10207:8676..9021 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig10207 8677..9021 + |
1622815521.5159297-UTR-M-pyrifera_M_contig10207:9243..9795 | 1622815521.5159297-UTR-M-pyrifera_M_contig10207:9243..9795 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig10207 9244..9795 + |
1692277448.1819701-UTR-M-pyrifera_M_contig10207:9243..9795 | 1692277448.1819701-UTR-M-pyrifera_M_contig10207:9243..9795 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig10207 9244..9795 + |
1622815521.5276718-UTR-M-pyrifera_M_contig10207:10135..10222 | 1622815521.5276718-UTR-M-pyrifera_M_contig10207:10135..10222 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig10207 10136..10222 + |
1692277448.1891332-UTR-M-pyrifera_M_contig10207:10135..10222 | 1692277448.1891332-UTR-M-pyrifera_M_contig10207:10135..10222 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig10207 10136..10222 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622815521.4330754-CDS-M-pyrifera_M_contig10207:3027..3233 | 1622815521.4330754-CDS-M-pyrifera_M_contig10207:3027..3233 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig10207 3028..3233 + |
1692277448.1151042-CDS-M-pyrifera_M_contig10207:3027..3233 | 1692277448.1151042-CDS-M-pyrifera_M_contig10207:3027..3233 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig10207 3028..3233 + |
1622815521.4455073-CDS-M-pyrifera_M_contig10207:3844..4088 | 1622815521.4455073-CDS-M-pyrifera_M_contig10207:3844..4088 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig10207 3845..4088 + |
1692277448.1263793-CDS-M-pyrifera_M_contig10207:3844..4088 | 1692277448.1263793-CDS-M-pyrifera_M_contig10207:3844..4088 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig10207 3845..4088 + |
1622815521.4591167-CDS-M-pyrifera_M_contig10207:4722..4928 | 1622815521.4591167-CDS-M-pyrifera_M_contig10207:4722..4928 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig10207 4723..4928 + |
1692277448.1353776-CDS-M-pyrifera_M_contig10207:4722..4928 | 1692277448.1353776-CDS-M-pyrifera_M_contig10207:4722..4928 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig10207 4723..4928 + |
1622815521.4709697-CDS-M-pyrifera_M_contig10207:7329..7943 | 1622815521.4709697-CDS-M-pyrifera_M_contig10207:7329..7943 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig10207 7330..7943 + |
1692277448.1438003-CDS-M-pyrifera_M_contig10207:7329..7943 | 1692277448.1438003-CDS-M-pyrifera_M_contig10207:7329..7943 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig10207 7330..7943 + |
1622815521.484551-CDS-M-pyrifera_M_contig10207:8674..8676 | 1622815521.484551-CDS-M-pyrifera_M_contig10207:8674..8676 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig10207 8675..8676 + |
1692277448.1597507-CDS-M-pyrifera_M_contig10207:8674..8676 | 1692277448.1597507-CDS-M-pyrifera_M_contig10207:8674..8676 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig10207 8675..8676 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig10207.445.1 >prot_M-pyrifera_M_contig10207.445.1 ID=prot_M-pyrifera_M_contig10207.445.1|Name=mRNA_M-pyrifera_M_contig10207.445.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=424bp
MAATAGRRRTGPGDGRNESRVGSGAGLVEEGRGGKGKGDSKRGGVIEWEE HVYRWVFGRGSRSAWLPKRDVYAEFLNHPPGVCPIVDPAADGCSRCRRKS GLGDTVDNYRETIQSEKGHCFHSGGSQGGRMEGDGDEVGAAAAAAAASRD GVPALLLQRADEGWHGDLRDIDIVGGAADCAHAPPHLQHASRPPTPEAVL RAASRTLSECLEASQTRDTVPSLSRPALASAGGAGGGGGGGGGGRTSGGG VASAATAGPNATFTIRTPFGVDADRGDGVLGWLSLEGSGGSSAPTAPPGG SRPPAFAAKGKGRPGKYVGPGEAVGSIFSAPLSVLPPPRAGTAPEKSMWL RDRTAQAPVVLLRGPSPETGTLSSSALVTSGGLGLLPSFTEGIGGAAAAP AGADRGRPRNRASGGKGGPEILG* back to topmRNA from alignment at M-pyrifera_M_contig10207:1045..10222+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_M-pyrifera_M_contig10207.445.1 ID=mRNA_M-pyrifera_M_contig10207.445.1|Name=mRNA_M-pyrifera_M_contig10207.445.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=9178bp|location=Sequence derived from alignment at M-pyrifera_M_contig10207:1045..10222+ (Macrocystis pyrifera P11B4 male) GGTGCTTTGTTCAGGCGCGGCGCAATTATCAGGGTCCACAACGCCCACCC
CATCTATGCTGCTGGCGGGCTAGTCGGCTTGGGGGCTTGCCTGCGAACTT
CAGTGCAGGTGAGCGTGGCGGTTCACGGCATTTATTTCTGGAGGGGCTAT
CCATAGTTTTTTTTTTTACACATCGGACCTATCACCGATCTCCACTTACT
TCATGATCTGCAGAAGTAGAAGGCAAGTACATTCCATTTTCCTGATCTTC
ATGGTCAAGTGGGTAGCTCATGTTACGCCCGGATGGGACCCGACTAAACC
TGCAGAATTGAGCACATGTTTTCGTGGTTAAGGTCTGTAAATACTGTACT
GCAACTCGTGACGATCTAGATGGACCAGACGACTTATGCGACAGCGGAGG
TGCACCGTTTGTTTTCCCAGGCTCCCCGCTTGAGGAGCCCTTGTACTATT
GGCAAGTCGCCCAAAAACTGACTTGAAGGAAATTGAAAGTGCAATGGTTG
ACGAATAGTCCCATGGCCTAGGTACGCAAACATACGATTTTGCACACCAA
AGAATGGAGTTCCGACGATTTTGGGCCAAGAAGTCCCGTCATTCAGAAAA
TGTTTTTGTGCGAAAATGTGATCGTGATTTTGTCTAGTGGCGTAGAAAGT
TTGCTCTCCCCCACTGTGCCACTGGTTTGGTATCGATGGCACTACGATTG
TCGAGTGAGATGATGTTGCTCCTTGCCCCTCTCGTTCAGAGGAAGATTGC
GTCGCGGTAGTGAATTGCGATGTCGGATGAAAAAGCCTACCTCTACGTGG
TTCCACCCCATCGCAAGCGCTGATGAACGAACGCCGAGCCCTGCAGCACG
ACGGGCGGAAAGGGCCCAAGTGGTTGACAGCCTTCGCATAGGGAGGAAGG
ACCGTGGGCGCTGGCGTGGTGACTTCCGTCATCGAGTGATTACCCGATCC
GCCCCCCCGAAAGTTAACCTCCAATCAGTAGAAAACGTGGACGGCGAATC
CATGAGGCAGATGAGATAAATCCTCGTTTGATGACCTAGATCGTTTTCGG
GGCAGTTGAGTTCCCTGATCCGTGCGATTGATCTGTGTGATCTAGATCAT
GCATGCCGGATGGGCTCTGCATGAAACGCCTCTTTGCAGATATTTTGCTC
TTGCGTAGCATATCATGCCCCCTTTAGAGCTGCAGTCCCGGTGTGGGAGA
CAAAGCGCTTGGAATTTGAGTCGGATTTAGGTTTCTGGACAGTGCCGTCC
TGAAAGGGTTGAGGAAAATACAGGGTCTAGTAGATGGTCTATATGCTGTA
TCGTGACTTTTCCGACGTGTGGAGGATTCGTAACTACACACTGGTGACGT
ACGTACGTACGTACGTACCTACCGGTACCTTTTTGTCTAATGTAGATGGT
GACGCTTGGTGCCTGCTTGGTGCCGTGGCTGGAATCGTTACAGGTGGTGC
GCTTCTCCCCCCTGGCGGTAAACGCCTCTTATCGTCCCCTAGCAGGGGGA
CCGAGCCCCGTTCCCCTGGTCGCGCACGCCTGGCGACACGCCTTCAAAAA
CGCCTTCTTGCGGCCGGAATTCCCGCCAGCTCAAGCTCCTCTGGCACCCA
GCAAGATCAACGCCTCTGTTAGCAGGCCGCAAGACGCACCGAGCTCCTCA
GTAGCTTCTGGGTCTGTTGGGAGGGGGGCGAAGATAAGACGTACCGCCGG
TGCTGTCGACGCGACTGCTCAAGCCGCACCTGCTGCCGCTGGTGCTGCTG
CTGGTGTTGGCGCTGGCGTTGGTGGTGACGGTGGTGATGGTGGTGGTAGT
AGTGGTCGGGATGCTGTTACTGCTGCTGCTGCTGCTGCTGCTGCTGCTCC
TGCTACTGCCACCGCTCTTACTGCTGCTGCTACTGCTGCTGTATTCGACG
GAGGCGTGTCACGTTCATCCCCGACCGCGCCTCCGACACCCGCGCTAGCC
TTCAAGAATGCCCCCACAGCTAGAGACGCCGACATGGCGGCGACAGCGGG
CCGCCGTAGGACTGGACCTGGCGATGGCAGAAACGAGTCTAGAGTGGGCA
GCGGGGCTGGGCTCGTCGAGGAGGGCAGAGGGGGGAAGGGGAAGGGGGAC
AGCAAGAGGGGCGGGGTGATCGAGTGGGAGGAGCATGTGTATCGATGGGT
GTTCGGCCGGGGGTCGCGTTCCGCATGGCTTCCCAAGAGGTAAGCGAAGA
GGGTAAAGGGGGGGGGCTGCGGAGGGTTGTGGCATTTTCTTGAGGGAGGG
GTGAATGGGTGGGGCTGAGGTTATTGTTTGTCTTTTGGTGGTGGTTTTCC
GTTTGTTGAGTTGTGAGCCGGTTGGGGATGACGCAACCTCGACGGGATGA
AAAAAACAGGAGGTGCAGTTGGAGGCCAGAACCCCCCCCCTCGGTATTCC
TGACTGTTCGAGTGCATTAGAGGTTAACCTGCTCATGCTTGGGTTGGTTT
CGAGAATGCTCAAGACACGACTTGGTCGATGCCAAGGAGCTGAGCCGAAG
CGTTGTCTCTGTGCCAGAACCCCTCGACAAGACTCCTGACAGTTCGTTCG
GGTAGAATAGACGCCAACGTTCCTTTGTATGCCTATTGTGCTTGAAGCTT
GCTTGGGTCTGCTGCAGGTGTTGTGTCAAGTGTTTTCGGGTTTTTTCAAC
GCTATCGCGGCACCCATCGCCGCACTCGTGTCTCCTTACAGAGTCCGCCT
CGCTGGTATGTTTGCCGCGATGGTGTGACGCTGTCCCATGCGCTATTACC
GACTGACATACGGTATTTTGTTCGGCGTCATTTTCGTTTTTGCAATGCAG
GGACGTGTACGCGGAGTTTTTGAACCACCCTCCAGGCGTTTGCCCCATAG
TAGATCCTGCGGCCGACGGCTGCAGCAGGTGCCGAAGGAAGAGCGGCTTG
GGCGACACGGTGGATAACTATCGCGAAACAATCCAGAGCGAGAAGGGGCA
TTGTTTCCATTCTGGCGGGAGTCAGGGAGGTCGGATGGAGGGCGACGGGG
ACGAAGTGGGAGCTGCTGCTGCTGCTGCTGCTGCATCCCGAGACGTAAGG
CACCTGATCTGCTTGGTATCTCACGACAGTGAGGCCGCAACCTCGGTTGA
ATCGACGCCGTCTGTGTCTCCTTCGTCTTTGAGCAGAACAACGTGATCCC
TCCTCTGTTCTACTCGCTCACGCACCTGTCTTCCCGATTATTCCACGCGA
TCGTCACCGCCACGCTGGAGCGGCATAACAACCAGCTGAAACTATGGTCG
ACATGTGTGTGTTTTTTCAAGTGTTGGCATCGGGCGCCCCGAGGAGGTTG
TTGTTGTTCACGTGCCCGCCGTACCTGTGGCCTGAGGTATACACCACGCG
TGTGTGTCCGGCAGTTTAGCAGCGCGTTCATACCCCGGCCCGAGCCCAGA
GACATGGCCTCCTACCGAGTGACGTGCTTGGAATCCCTATTTTCTAGGGG
CGTGTGTGAGCTGGCTGGACTCACGTCTAGTTGGTAGTGGAATGACGAAG
TAAGCCGACTCTGGACGGAATTAAAAGGACAATTTTAGTTACATATTAAG
GTACAAACGAATCTTATGTGTACGTCCGGAGTGGTATAAGGCATGCCTTA
TCGTAGCGCGCGTCTGTGCACCCTTCTAATGGTCAGGGGTGCACGGTTTG
TGTCATCTGATCCCGCGTTCCCCCACAGGGAGTTCCAGCCCTGCTTCTTC
AGCGGGCTGACGAGGGGTGGCATGGAGACCTGCGGGACATCGATATTGTC
GGCGGCGCTGCAGATTGCGCTCATGCTCCTCCTCACTTGCAGCATGCGTC
TCGGCCGCCGACCCCCGAAGCCGTTCTGCGGGCCGCCTCGAGGACCCTCT
CCGAATGCTTAGAGGCGAGTCAAACGCGGGATACGTGATGGGGGGGGAGG
GATGCGGGGTCCGGTTTTTGGTGGGCGGTTGAGGCCACCCAGACGTTCGC
GAACGCCTTGCTACAGAAAGTAGGCAGTTCTTTCGCTCCTTGAAACATTG
TTCCGTTGAACCTCACCCGGCGATGTAGAAGGCAGGGAGGGGGGGGTCAG
TCGGTCTACAGGGGGCTGCTTCTCTTCGGTTGTGACGAAGGAGTTTTACT
CCGCCATTTGTCTTACACCTCGGTAGAACGTACCTGATACGAAATTGGAG
GTACACTGCTGTATCTGGTTTTATTTCACGGTAGGCGGTACACCGAACCG
TCCATTGCTAGGGTATGAGTTGCCGACGCATGCCAACTTGAGGTAGAGGT
GCGCCCTCTTTTTATCCTGAGCTTCCTGACTTTGAGGAGCTCTACACTAT
TAGTATGTCACCCAAAAACTGATTCTGGAGGGAATATAGGTGCATATACA
CACTCGATGACCTAATATCATGGCTTAACAATACAAACAAAAAATATTGC
AACAACAAGGATGAATCTCCGACGACGAGTTTGGGCTTAGGATCCCCGCC
ATTCAGAAACTGTTTCAGCCCAAAAGTGCTACGTACCCCTACCGTGTAGC
ACGCGTCTGTTACCGATGGCTGCGTGCGTTCGATTTCGTTTTGTGGGAGC
TTTGCGTCTGTGTCTGCCTCGGTGCGTTTGTGGCTTGAGGTTGTGTGGGT
TTGTATTGATGAAACCTACCTATCTGACCGGTCAAATAAGCTCCGATTAA
TGTTCATTTTAGAGACCAAACGTGGATTATATTCCCGGTTCAAGTGGTTA
GTCAGGTTATTAAAGGAGAACACAGTTAGGGGTGGGACTGAAATATTTTT
AGACGTAAAAAAGTCACAAAAAATGTCAGCGGTCGCTGTCTGGGAAAAAA
GAATCTTTAAGAAATTAACCAATCAGCGCGTGAGAAAGAACGGACACGTC
ACCAAAAAACTCTCCAGGTGCTATCATATACCACGTACCAGGTACCAGAG
GGTATGTCATGTATGGTACGAGAGGAGCTGCAGCGTGTCGCTCCAAAAGG
GCGGAGCAGTACACAACAAAAAACACCACGACGAGTGCTTGAACAGCAGC
GCACAAACCGGCGCGTGAGCGTGAGGGGGAATTACTGGTGGGCCCTCCGC
CTCGATGGCTGACAACCCGCAAGTGCAGCCCCTACCGGGCCTGGTTGAAG
GTGGATCTGCTGATCCTGATGCGGCTGCTGGCGGTACTGACCAAGCTGCT
GCTGCTGCTACTGCTGCTGCAGCGGTGCAAGATGTTCCCATCCACAGCCA
TCGAGCGCGGTCGCGGCTGTCCTCCGCCCCCGCGATGCCACGGCGGACAA
CAGCATTCGCTCGGCGCACGATCGCCGACGCCTCGTGGACAGTACGACCC
GTACGCTGCAGATATGCCTCCCGATTCGCTTGGACAATGTTTTTCCTTTT
GCCCTTGCCCGAGGTTCGTTCTGGTGTTTTCGAATAATTCCCCATCAAGA
AATTGAATGTCATGGTACAGGTCCCGAAAAAGTGACTGAAAAGGGGCGAT
TTTTCGCCAGGTCGTTCTCTACGGATTCTACGTCGATTCGACCGGGGTTT
GTTTTGCTGTATGCCACACATCCCAATGCAGAGTATGATTATGTCTTACA
CACTACTCAAAGCACGACAGAGAGCAAGAGGCAGAAAAAATTTAAAAACA
TGTGTTTCTCCGCACTTTTCAGTCTATAAAGACGTCAATTTGTACTCCTG
TGCCAAAAAAAGCATGCGATCCGAACGGTATGTGCCCTGTGTGGGGTGTC
TGGATGAAGTCAAGACCGGCTCCATCTCCACCTCAGAGAAATATCAGATA
CGAGTTAACTACGCATCCGCACTAAAACCAAGTAGTTAGGGGTATGGCGG
TAGTTTTATTTTTTCAGAATTTTTAATATTTTTTGGCTGGTCGGCTCGAA
TAGCCTGCCGCTTTTTTGGGTCAAATCAGGCCTTCAGTCCCACCCCTAAC
AGTAGTCAGGACCAAACATGATTGGCGAAAATACTGGAATATATAGCTTT
TTGTGTAAATTATGGGTCCTGATTACTTTGCCCCCCCGTGATAGTTAATT
GGCTTTTACTTTCCCCACCCTCCTAAACAAAAAATGCAAAATACAAGGAA
CATTTTTGTATGTTAATACTTGGTTCGAACAGTTTAGATATTTAGGGATG
CAGTTGGTGGCCGCTAAGTCTCGATCTCACTCGCAACCGCGCCCATTGCC
GCGGTACTACTTGTAGTTATACCATTGATAGTGATAGAACCGCCCGCGTT
CCTCGACCGCGCATAGTTGACCCAATCCCACGCTCTTGCCGTCCACACGC
GCGCCACAGGTGGCCGTGCAGAACGCCGTCGACAGCGTGCCGTCGCTGTC
GCGGCCAGCCCTCGCGAGCGCCGGAGGTGCGGGCGGCGGCGGCGGCGGCG
GCGGTGGCGGGCGTACCAGTGGAGGGGGGGTAGCGTCAGCAGCAACAGCA
GGCCCGAACGCCACGTTTACAATACGCACCCCTTTTGGCGTCGACGCGGA
CCGAGGGGACGGCGTGCTGGGTTGGCTGTCTCTCGAGGGCAGCGGAGGAA
GCAGCGCTCCGACGGCCCCGCCCGGCGGGTCTCGACCTCCGGCGTTCGCC
GCGAAGGGGAAAGGTCGACCTGGAAAATACGTTGGGCCGGGCGAAGCGGT
GGGGTCGATTTTTTCCGCACCGTTGAGCGTTCTTCCTCCTCCGAGAGCGG
GTACCGCGCCGGAAAAATCGATGTGGTTGCGAGACCGCACGGCTCAAGCG
CCCGTTGTTTTGCTCCGCGGACCCTCTCCGGAGACTGGCACCTTGAGCTC
GTCGGCGTTGGTGACGTCCGGCGGTTTGGGGCTGTTGCCGTCGTTTACTG
AAGGCATTGGTGGTGCCGCTGCTGCTCCAGCGGGCGCGGACCGGGGCCGA
CCGCGGAATCGGGCATCAGGAGGGAAGGGAGGCCCGGAAATATTGGGGTG
TCGTCCAGACGACAGGTACACCGCAGCGACGCCCACGCCGTTTATGTCTG
CTGGGCAGGAGATGCGGGCGCGGGAACAAAAAAGAAAGGGATCGGGTCCC
GCGGCGGCGACATTCGACGGGTCTCGTGGGGAGACAACCCCCGCGGCGGT
GGAAGAAGAGGAGGTGCGACTTAGTGTGCTTGCCCCTCCCGAAGGTTTTG
TTTTCGTCGGCCATGTCGATGATGTTAGTGGACCTTCTCTCGAGTTGTCG
GAGATGGTGGGTGGGTCATGTGGCCGGATGTTCTGACGCCGCCGCCGGCA
TATCCCCCTACGCAGGAGCGAGTCTGACGTTCCCCCAGGTTTAGCATCGC
CGGCTTTGGCGAGCAGATAAACTCGATGCCGCGACAAGGTCTATATTCAC
ACCTGAGGCACCTTATAGGACTCCCAAGTCACTTTTTTTCCGAGCAATAC
GGCGTGGGTGGCGGTGTTCAAAGTTTTTTGCCGCAGTTTGCGCTGCGGTG
CGGATACCCCCTGGTTCAAACCGGTATCTCCACCAAGCTGCGGACTCCGC
CCACGTTGGTTGAGTATGTCGTTTTTTTTCTTCCGCGTACAACTCAGTAT
GCACTGCTGTGGATAGGGTTTTACTCAACACTCTTTGTGTGTTTCCATCC
GTCCTGCTCTGCGTCCCCCCCCCCCCCCACCTCAACCCGCCCCGCTCTTC
CCCCCTGACCTCCCCTTCCGAAGAGGCGAGAGCCCGTCGCCTTAGCCCTT
GTGCGGAAATTTGCCATCTGCACGGAAGTGGTGATGCTCGGCGCGGCGGC
CATATCGCGGGCATCGGGGGCGGTAGCAACAGCGGGGGCTTGGACATCTT
CCTCCGCCCCAGAAGTCCAGAAAAAAATGAAGAGGCTAACACGCCCTCTC
CAAAGAGACGGGAGGGGTGGATGCCAACCGTTGTCGGCCGAGGCGCTGAG
AGTCGTGGGCGGGGCCTGGGTGCTCCTTCGGAGCTATCTTGTCGTGCATG
CGCGGGACATGTTTGTCCTATATAAGCGCGACGGGTTCGGGAACGGGGAT
GGCAGCAGCGTTGTGGCTGGAAGCTCTGTGCCGCGATCGACCTTGCCGCG
ATTGCACCTCGCTGTCGGCGGCCAACCTGCGTCCAGTGCTTCTGTCGGGG
GCGGGCGGGGGGCCGGTGAAGAACGGGAACGTTTGGTTCCTCCGCTGGTA
GGGGTAGAGGGTGCCTCACCTCGCGGGGGTAGGGTTTGGGCAGCAACCGA
CGCGAGATTAGCGGTGAGGGAAAATGTGCAAGGGAAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCATTTTGTCGTCAATAGC
ATGCCGGCGGCAGATCAAGCTAGCGCCGGTTCCAGACGCAAACATGCGGG
GAATCGATCGGGCGCCGAAGGGCGCCTGAACCTCAGCCTTTCCGTCAGCG
AGGCGCTGGTCGTCCGACTCGCCAGCGAACGGATAGCCGCGGGAGGTGCC
AGGGCCGTCGGTAGTGGCCGCGGTGGTAGCGGCGAAAGCGGTGGCGGCCC
GAGGGTTGCCTCGTCTCACGAGCGAGAATCTGTCACCGTATCGGGTCTCC
TGCGGGAAGTAGGCTTTCGTTCTGTTTCTACCGCATTTGGTGCTGGAGCC
GGTAGCGCTAGGACGGGACGGGAGGTGGCGGCGGCAGAGCGCACGGGTTC
GGGAAGCGTGGACATGTTTGACGTACTATCGCGGACGAAGATGCAGCTGT
GCTTGACCCTCGAGCAGGGCGCCGACAGGATCTGCGTGTACTTGAGCTTA
CGCAGGGAGTGTTGGCCGGCGAGCATGATTCCGGGGTATTCCACCGTGCA
GGTACAGTACGCGTTAGGTCACGTTGTTGTTTCTTCGTGTTGCCAAACCG
GCCAACGCAAAGATGCCAGGAAATGGCGGTTCAGGCCTCTCTGACAAAAG
GCAAACAGACTGAACTCTTTTGCAACTCATACTGAAAGATATGCTCTGTT
AAGCGTCACGTTTGTTTGATAGCTCCTGGACCATGCGCGTTATATAGTTT
TGGTTTTGCCGAAGCGCGAAATCGGTCAGCCGCGCCCCACCCACAAGCGT
TCGCGAGCAATGGCAAGGGGAAGCTATCGATGCGCACGAGAACCCTACCC
GATGAATCGCAGTCGTTGTTGCGAACGTGTTCCGTGTGCAGGTGGAAGGC
GTTTGCAGGAAGCTCTCGGGTAACGGCAAGAGCGTCTATCTGGCGGTTTC
TCGTTCTGGTGGTGGGACTGTAAAGGTA back to topCoding sequence (CDS) from alignment at M-pyrifera_M_contig10207:1045..10222+ >mRNA_M-pyrifera_M_contig10207.445.1 ID=mRNA_M-pyrifera_M_contig10207.445.1|Name=mRNA_M-pyrifera_M_contig10207.445.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2544bp|location=Sequence derived from alignment at M-pyrifera_M_contig10207:1045..10222+ (Macrocystis pyrifera P11B4 male) ATGGCGGCGACAGCGGGCCGCCGTAGGACTGGACCTGGCGATGGCAGAAA CGAGTCTAGAGTGGGCAGCGGGGCTGGGCTCGTCGAGGAGGGCAGAGGGG GGAAGGGGAAGGGGGACAGCAAGAGGGGCGGGGTGATCGAGTGGGAGGAG CATGTGTATCGATGGGTGTTCGGCCGGGGGTCGCGTTCCGCATGGCTTCC CAAGAGATGGCGGCGACAGCGGGCCGCCGTAGGACTGGACCTGGCGATGG CAGAAACGAGTCTAGAGTGGGCAGCGGGGCTGGGCTCGTCGAGGAGGGCA GAGGGGGGAAGGGGAAGGGGGACAGCAAGAGGGGCGGGGTGATCGAGTGG GAGGAGCATGTGTATCGATGGGTGTTCGGCCGGGGGTCGCGTTCCGCATG GCTTCCCAAGAGGGACGTGTACGCGGAGTTTTTGAACCACCCTCCAGGCG TTTGCCCCATAGTAGATCCTGCGGCCGACGGCTGCAGCAGGTGCCGAAGG AAGAGCGGCTTGGGCGACACGGTGGATAACTATCGCGAAACAATCCAGAG CGAGAAGGGGCATTGTTTCCATTCTGGCGGGAGTCAGGGAGGTCGGATGG AGGGCGACGGGGACGAAGTGGGAGCTGCTGCTGCTGCTGCTGCTGCATCC CGAGACGGACGTGTACGCGGAGTTTTTGAACCACCCTCCAGGCGTTTGCC CCATAGTAGATCCTGCGGCCGACGGCTGCAGCAGGTGCCGAAGGAAGAGC GGCTTGGGCGACACGGTGGATAACTATCGCGAAACAATCCAGAGCGAGAA GGGGCATTGTTTCCATTCTGGCGGGAGTCAGGGAGGTCGGATGGAGGGCG ACGGGGACGAAGTGGGAGCTGCTGCTGCTGCTGCTGCTGCATCCCGAGAC GGAGTTCCAGCCCTGCTTCTTCAGCGGGCTGACGAGGGGTGGCATGGAGA CCTGCGGGACATCGATATTGTCGGCGGCGCTGCAGATTGCGCTCATGCTC CTCCTCACTTGCAGCATGCGTCTCGGCCGCCGACCCCCGAAGCCGTTCTG CGGGCCGCCTCGAGGACCCTCTCCGAATGCTTAGAGGCGAGTCAAACGCG GGATACGGAGTTCCAGCCCTGCTTCTTCAGCGGGCTGACGAGGGGTGGCA TGGAGACCTGCGGGACATCGATATTGTCGGCGGCGCTGCAGATTGCGCTC ATGCTCCTCCTCACTTGCAGCATGCGTCTCGGCCGCCGACCCCCGAAGCC GTTCTGCGGGCCGCCTCGAGGACCCTCTCCGAATGCTTAGAGGCGAGTCA AACGCGGGATACCGTGCCGTCGCTGTCGCGGCCAGCCCTCGCGAGCGCCG GAGGTGCGGGCGGCGGCGGCGGCGGCGGCGGTGGCGGGCGTACCAGTGGA GGGGGGGTAGCGTCAGCAGCAACAGCAGGCCCGAACGCCACGTTTACAAT ACGCACCCCTTTTGGCGTCGACGCGGACCGAGGGGACGGCGTGCTGGGTT GGCTGTCTCTCGAGGGCAGCGGAGGAAGCAGCGCTCCGACGGCCCCGCCC GGCGGGTCTCGACCTCCGGCGTTCGCCGCGAAGGGGAAAGGTCGACCTGG AAAATACGTTGGGCCGGGCGAAGCGGTGGGGTCGATTTTTTCCGCACCGT TGAGCGTTCTTCCTCCTCCGAGAGCGGGTACCGCGCCGGAAAAATCGATG TGGTTGCGAGACCGCACGGCTCAAGCGCCCGTTGTTTTGCTCCGCGGACC CTCTCCGGAGACTGGCACCTTGAGCTCGTCGGCGTTGGTGACGTCCGGCG GTTTGGGGCTGTTGCCGTCGTTTACTGAAGGCATTGGTGGTGCCGCTGCT GCTCCAGCGGGCGCGGACCGGGGCCGACCGCGGAATCGGGCATCAGGAGG GAAGGGAGGCCCGGAAATATTGGGGTCGTGCCGTCGCTGTCGCGGCCAGC CCTCGCGAGCGCCGGAGGTGCGGGCGGCGGCGGCGGCGGCGGCGGTGGCG GGCGTACCAGTGGAGGGGGGGTAGCGTCAGCAGCAACAGCAGGCCCGAAC GCCACGTTTACAATACGCACCCCTTTTGGCGTCGACGCGGACCGAGGGGA CGGCGTGCTGGGTTGGCTGTCTCTCGAGGGCAGCGGAGGAAGCAGCGCTC CGACGGCCCCGCCCGGCGGGTCTCGACCTCCGGCGTTCGCCGCGAAGGGG AAAGGTCGACCTGGAAAATACGTTGGGCCGGGCGAAGCGGTGGGGTCGAT TTTTTCCGCACCGTTGAGCGTTCTTCCTCCTCCGAGAGCGGGTACCGCGC CGGAAAAATCGATGTGGTTGCGAGACCGCACGGCTCAAGCGCCCGTTGTT TTGCTCCGCGGACCCTCTCCGGAGACTGGCACCTTGAGCTCGTCGGCGTT GGTGACGTCCGGCGGTTTGGGGCTGTTGCCGTCGTTTACTGAAGGCATTG GTGGTGCCGCTGCTGCTCCAGCGGGCGCGGACCGGGGCCGACCGCGGAAT CGGGCATCAGGAGGGAAGGGAGGCCCGGAAATATTGGGGTAGAG back to top
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