mRNA_M-pyrifera_M_contig102012.437.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig102012.437.1 vs. uniprot
Match: A0A7K2AVK2_9ACTN (DUF4202 domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2AVK2_9ACTN) HSP 1 Score: 84.0 bits (206), Expect = 1.970e-18 Identity = 47/76 (61.84%), Postives = 54/76 (71.05%), Query Frame = 1 Query: 22 RATQIVQKKELGSDPEVQLFEDAVCLTFIETQFRATTDKLADDEKMVDVVAKTLRKMSERGIDAAGTIA--LDERS 243 RATQIV K+ LGSDPEVQ FEDAV LTF+ET+ R D+L DD K D+VAKTL KMS G + A +A L ERS Sbjct: 70 RATQIVTKRGLGSDPEVQTFEDAVSLTFLETELRPVLDRLDDDTKAADIVAKTLAKMSAAGREQAAQVAATLGERS 145
BLAST of mRNA_M-pyrifera_M_contig102012.437.1 vs. uniprot
Match: A0A7K2D985_9ACTN (DUF4202 domain-containing protein n=5 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2D985_9ACTN) HSP 1 Score: 84.3 bits (207), Expect = 3.370e-18 Identity = 47/76 (61.84%), Postives = 54/76 (71.05%), Query Frame = 1 Query: 22 RATQIVQKKELGSDPEVQLFEDAVCLTFIETQFRATTDKLADDEKMVDVVAKTLRKMSERGIDAAGTIA--LDERS 243 RATQIV K+ LGSDPEVQ FEDAV LTF+ET+ R D+L DD K D+VAKTL KMS G + A +A LDE S Sbjct: 110 RATQIVTKRGLGSDPEVQTFEDAVSLTFLETELRPVLDRLDDDTKAADIVAKTLAKMSAAGREQAAGVAARLDEHS 185
BLAST of mRNA_M-pyrifera_M_contig102012.437.1 vs. uniprot
Match: A0A6B1AWL3_9ACTN (DUF4202 domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1AWL3_9ACTN) HSP 1 Score: 82.0 bits (201), Expect = 3.320e-17 Identity = 47/83 (56.63%), Postives = 56/83 (67.47%), Query Frame = 1 Query: 22 RATQIVQKKELGSDPEVQLFEDAVCLTFIETQFRATTDKLADDEKMVDVVAKTLRKMSERGIDAAGTIA--LDERSAGIVGRA 264 RA ++V KK LGSDPEVQ FEDAV L F+ET+ D+L DD K+ D+VAKTL KMS G + A +A LDERS IV A Sbjct: 125 RAAEVVTKKGLGSDPEVQTFEDAVSLAFLETELLPVVDRLEDDSKVTDIVAKTLAKMSAAGREQAQELAAVLDERSRMIVAEA 207
BLAST of mRNA_M-pyrifera_M_contig102012.437.1 vs. uniprot
Match: A0A6L7WCI4_9CHLR (DUF4202 domain-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6L7WCI4_9CHLR) HSP 1 Score: 81.3 bits (199), Expect = 6.450e-17 Identity = 47/89 (52.81%), Postives = 61/89 (68.54%), Query Frame = 1 Query: 16 LQRATQIVQKKELG-----SDPEVQLFEDAVCLTFIETQFRATTDKLADDEKMVDVVAKTLRKMSERGIDAAGTIALDERSAGIVGRAA 267 + R QIV K+ L +DP+VQ FEDA+ L F+ETQF T++L DDEKM +VA+TLRKMS RG +AA +A DER+ I+ RAA Sbjct: 122 IDRVRQIVLKQGLTRDRETTDPDVQAFEDALSLVFLETQFAELTERLDDDEKMARIVARTLRKMSTRGREAARDLAYDERARAILDRAA 210
BLAST of mRNA_M-pyrifera_M_contig102012.437.1 vs. uniprot
Match: A0A6B0W9L2_9CHLR (DUF4202 domain-containing protein (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6B0W9L2_9CHLR) HSP 1 Score: 77.4 bits (189), Expect = 9.010e-17 Identity = 41/70 (58.57%), Postives = 52/70 (74.29%), Query Frame = 1 Query: 58 SDPEVQLFEDAVCLTFIETQFRATTDKLADDEKMVDVVAKTLRKMSERGIDAAGTIALDERSAGIVGRAA 267 +DP+VQ FEDA+ L F+ETQF T++L DDEKM VA+TLRKMS RG +AA +A DER+ I+ RAA Sbjct: 8 TDPDVQAFEDALSLVFLETQFAELTERLDDDEKMARSVARTLRKMSTRGREAARDLAYDERARAILDRAA 77
BLAST of mRNA_M-pyrifera_M_contig102012.437.1 vs. uniprot
Match: A0A6B1EFV0_9ACTN (DUF4202 domain-containing protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1EFV0_9ACTN) HSP 1 Score: 77.0 bits (188), Expect = 2.110e-15 Identity = 48/89 (53.93%), Postives = 55/89 (61.80%), Query Frame = 1 Query: 22 RATQIVQKKELGSDPEVQLFEDAVCLTFIETQFRATTDKLADDEKMVDVVAKTLRKMSERGIDAAGTIALD----ERSAGIVGRAAATL 276 RA IV KK LGSDPEVQ FEDAV LTF+ETQ +LADD K +VAKTL KMS+ G A +A +RS I+ A ATL Sbjct: 111 RAAAIVSKKGLGSDPEVQTFEDAVSLTFLETQLEPVIARLADDAKAASIVAKTLAKMSDAGRGQAQALAASGQFGDRSRRILTEAMATL 199
BLAST of mRNA_M-pyrifera_M_contig102012.437.1 vs. uniprot
Match: A0A523K273_9DELT (DUF4202 domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A523K273_9DELT) HSP 1 Score: 76.6 bits (187), Expect = 2.450e-15 Identity = 43/85 (50.59%), Postives = 56/85 (65.88%), Query Frame = 1 Query: 22 RATQIVQKKELGSDPEVQLFEDAVCLTFIETQFRATTDKLADDEKMVDVVAKTLRKMSERGIDAAGTIALDERSAGIVGRAAATL 276 R I++K+ LG D EVQ EDA+CL F+ETQ K DEK+VD++ K+L+KMSERG +AAG IAL G++ RA A L Sbjct: 104 RVGDIIRKRGLGRDAEVQTLEDALCLVFVETQLGDFATK-HPDEKVVDILMKSLKKMSERGREAAGAIALSAAERGLLARAVAAL 187
BLAST of mRNA_M-pyrifera_M_contig102012.437.1 vs. uniprot
Match: A0A6L7PF52_9CHLR (DUF4202 domain-containing protein n=2 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6L7PF52_9CHLR) HSP 1 Score: 76.6 bits (187), Expect = 3.830e-15 Identity = 45/87 (51.72%), Postives = 58/87 (66.67%), Query Frame = 1 Query: 22 RATQIVQKKELG-----SDPEVQLFEDAVCLTFIETQFRATTDKLADDEKMVDVVAKTLRKMSERGIDAAGTIALDERSAGIVGRAA 267 R QIV K+ L +DPEVQ FED + L F+ETQF + +L DDEKM ++A+TLRKMS RG +AA +A DERS I+ +AA Sbjct: 124 RVRQIVLKQGLTRDPETTDPEVQTFEDGLSLVFLETQFAELSARLDDDEKMARIIARTLRKMSARGREAARDLAYDERSGAILEQAA 210
BLAST of mRNA_M-pyrifera_M_contig102012.437.1 vs. uniprot
Match: A0A6I3C7X5_9ACTN (DUF4202 family protein n=2 Tax=root TaxID=1 RepID=A0A6I3C7X5_9ACTN) HSP 1 Score: 71.6 bits (174), Expect = 3.230e-13 Identity = 41/90 (45.56%), Postives = 57/90 (63.33%), Query Frame = 1 Query: 1 VSPDDLQRATQIVQKKELGSDPEVQLFEDAVCLTFIETQFRATTDKLADDEKMVDVVAKTLRKMSERGIDAAGTIALDERSAGIVGRAAA 270 + D ++RA Q+V K+ PE Q FED VCL F++TQF A D+L D++K +DV+ KTL KMS + AG+ L R ++GRAAA Sbjct: 122 IGADVVERAQQLVAKRGDQRAPEAQAFEDVVCLVFLDTQFEALIDRL-DEQKTIDVLRKTLPKMSAAAVALAGSAELHPRGRELLGRAAA 210
BLAST of mRNA_M-pyrifera_M_contig102012.437.1 vs. uniprot
Match: A0A534Q6U5_9DELT (DUF4202 domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534Q6U5_9DELT) HSP 1 Score: 71.2 bits (173), Expect = 3.310e-13 Identity = 41/86 (47.67%), Postives = 59/86 (68.60%), Query Frame = 1 Query: 16 LQRATQIVQKKELG-SDPEVQLFEDAVCLTFIETQFRATTDKLADDEKMVDVVAKTLRKMSERGIDAAGTIALDERSAGIVGRAAA 270 ++R + ++ K+ L D EVQ+ EDA+CL F+ETQ+R ++LA+D K++DV AKTLRKMSER A + LD R ++ RAAA Sbjct: 111 IRRVSDLLHKRGLARGDAEVQVLEDALCLVFLETQYREIAERLAED-KLLDVTAKTLRKMSERAKMLALELPLDARDLALIRRAAA 195 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102012.437.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig102012.437.1 >prot_M-pyrifera_M_contig102012.437.1 ID=prot_M-pyrifera_M_contig102012.437.1|Name=mRNA_M-pyrifera_M_contig102012.437.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=94bp VSPDDLQRATQIVQKKELGSDPEVQLFEDAVCLTFIETQFRATTDKLADDback to top mRNA from alignment at M-pyrifera_M_contig102012:382..663- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig102012.437.1 ID=mRNA_M-pyrifera_M_contig102012.437.1|Name=mRNA_M-pyrifera_M_contig102012.437.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=282bp|location=Sequence derived from alignment at M-pyrifera_M_contig102012:382..663- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig102012:382..663- >mRNA_M-pyrifera_M_contig102012.437.1 ID=mRNA_M-pyrifera_M_contig102012.437.1|Name=mRNA_M-pyrifera_M_contig102012.437.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=564bp|location=Sequence derived from alignment at M-pyrifera_M_contig102012:382..663- (Macrocystis pyrifera P11B4 male)back to top |