mRNA_M-pyrifera_M_contig10201.436.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig10201.436.1 vs. uniprot
Match: D8LRK2_ECTSI (WSC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRK2_ECTSI) HSP 1 Score: 353 bits (906), Expect = 1.270e-109 Identity = 169/276 (61.23%), Postives = 209/276 (75.72%), Query Frame = 2 Query: 983 GVPNGMCYGCCSQYIKYSLSRQADGRRRLELDAESDCTGSTSEVWDASEGEWVSTFYTLDEQTHEIDMFYMTEVDGMNELWVTEIEEWMAPSLYNQLQYNYVKLNLECPL-STVVESCVIFEPRFTNWSPDIDGSMAGYRFSDPAVPTFDVPE----TGGDVLLTSDNTIVQKTGEATETNCNGDQAQYYGEDGQWYSKFIGSDGETYALDHVFYPKTTNMYAATIQSVWEPNLQALLEQRTLRIRVWCTNDENAEYLFFRISGESATCNDIKGIC 1795 G +G G S Y +QA LE E CTGS+++ WD GEW STF T+D ++H++DMFYM+ VDG+NELWVTEIE WMAPSLYNQLQYNYVKL L CP + VV+SCVIFEP FTNWSPD+DG+ AGYRFSDPA+P+FD+PE + GDVLLT+ N++V KTG TET CNGD A+Y GEDG WY+ F+ SDGET+ L HVFYP ++YAATIQ+ WEPNL+ LLE R +R++V+CTNDE AEYL+ R+SGESATC+DI+ +C Sbjct: 389 GSDDGEICGGHSAMSTYEFRQQAITENALEESEERGCTGSSAQFWDPKNGEWRSTFETIDGESHDLDMFYMSLVDGVNELWVTEIESWMAPSLYNQLQYNYVKLILTCPEDNVVVDSCVIFEPTFTNWSPDVDGAAAGYRFSDPALPSFDIPEAVPNSPGDVLLTTSNSVVTKTGATTETYCNGDSAEYSGEDGYWYNAFVKSDGETHELKHVFYPTQRDLYAATIQANWEPNLRGLLENRIVRLQVYCTNDERAEYLYIRVSGESATCDDIEDLC 664
BLAST of mRNA_M-pyrifera_M_contig10201.436.1 vs. uniprot
Match: D7G672_ECTSI (WSC domain-containing protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G672_ECTSI) HSP 1 Score: 353 bits (907), Expect = 1.890e-109 Identity = 168/276 (60.87%), Postives = 210/276 (76.09%), Query Frame = 2 Query: 983 GVPNGMCYGCCSQYIKYSLSRQADGRRRLELDAESDCTGSTSEVWDASEGEWVSTFYTLDEQTHEIDMFYMTEVDGMNELWVTEIEEWMAPSLYNQLQYNYVKLNLECPL-STVVESCVIFEPRFTNWSPDIDGSMAGYRFSDPAVPTFDVPE----TGGDVLLTSDNTIVQKTGEATETNCNGDQAQYYGEDGQWYSKFIGSDGETYALDHVFYPKTTNMYAATIQSVWEPNLQALLEQRTLRIRVWCTNDENAEYLFFRISGESATCNDIKGIC 1795 G +G G Y +QA + LE + E CTGS+++ WD GEW STF T+D ++H++DMFYM+ VDG+NELWVTEIE WMAPSLYNQLQYNYVKL L CP + VV+SCVIFEP FTNWSPD+DG+ AGYRFSDPA+P+FD+PE + GDVLLT+ N++V KTG TET CNGD A+Y GEDG WY+ F+ SDG+T+ L HVFYP ++YAATIQ+ WEPNL+ LLE R +R+RV+CTNDE AEYL+ R+SGESATC+DI+ +C Sbjct: 388 GSDDGEICGGSRAMSTYEFRQQAITKNALEENEERGCTGSSAQFWDPKNGEWRSTFETIDGESHDLDMFYMSLVDGVNELWVTEIESWMAPSLYNQLQYNYVKLILTCPEDNVVVDSCVIFEPTFTNWSPDVDGAAAGYRFSDPALPSFDIPEAVPNSPGDVLLTTSNSVVTKTGATTETYCNGDSAEYSGEDGYWYNAFVKSDGDTHELKHVFYPTQRDLYAATIQANWEPNLRGLLENRIVRLRVYCTNDERAEYLYIRVSGESATCDDIEDLC 663
BLAST of mRNA_M-pyrifera_M_contig10201.436.1 vs. uniprot
Match: D7G7E4_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7E4_ECTSI) HSP 1 Score: 350 bits (897), Expect = 5.400e-109 Identity = 166/276 (60.14%), Postives = 210/276 (76.09%), Query Frame = 2 Query: 983 GVPNGMCYGCCSQYIKYSLSRQADGRRRLELDAESDCTGSTSEVWDASEGEWVSTFYTLDEQTHEIDMFYMTEVDGMNELWVTEIEEWMAPSLYNQLQYNYVKLNLECPL-STVVESCVIFEPRFTNWSPDIDGSMAGYRFSDPAVPTFDVPE----TGGDVLLTSDNTIVQKTGEATETNCNGDQAQYYGEDGQWYSKFIGSDGETYALDHVFYPKTTNMYAATIQSVWEPNLQALLEQRTLRIRVWCTNDENAEYLFFRISGESATCNDIKGIC 1795 G +G G Y +QA LE + E CTGS+++ WD GEW STF T+D ++H++DMFYM+ VDG+NELWVTEIE WMAPSLYNQLQYNYVKL L CP + VV+SCVIFEP FTNWSPD+DG+ AGYRFSDPA+P+FD+PE + GDVLLT+ N++V +TG TET CNGD A+Y GEDG WY++F+ S+GET+ L HVFYP ++YAATIQ+ WEPNL+ LLE R +R++V+CTNDE AEYL+ R+SGESATC+DI+ +C Sbjct: 328 GSDDGEICGGSRAMSTYEFRQQAITENALEENEERRCTGSSAQFWDPKNGEWRSTFETIDGESHDLDMFYMSLVDGVNELWVTEIESWMAPSLYNQLQYNYVKLILTCPEDNVVVDSCVIFEPTFTNWSPDVDGAAAGYRFSDPALPSFDIPEAVPNSPGDVLLTTSNSVVTRTGATTETYCNGDSAEYSGEDGYWYNEFVKSNGETHELKHVFYPTQRDLYAATIQANWEPNLRGLLENRIVRLQVYCTNDERAEYLYIRVSGESATCDDIEDLC 603
BLAST of mRNA_M-pyrifera_M_contig10201.436.1 vs. uniprot
Match: D7FS82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS82_ECTSI) HSP 1 Score: 295 bits (754), Expect = 2.190e-92 Identity = 150/266 (56.39%), Postives = 185/266 (69.55%), Query Frame = 1 Query: 13 KCILFLLPAVSPVLFTAAFQYTSDIVCGLTFSNGSLPNFLLPEAGPNSPGDQQLNEGNPIVESG------DTAVEGCNGEAAAFAVDEGLWNSSFIGNDGEEYDLDVFYATYDDQLWVRTLQPHMDPSLYEALNNAVVRLNVTC------NENESGCIEFTANFTDATPYNTTAPYVFNDTCYHGFSTGERVPTVKVPAASPEGPTSASSLGSNYTIILAGKADQGLPWSEGFDTDGEEKDDEFWSEWWETTHRGYGRRVSSDDGW 774 K F L A+ P +A Q+T+ C TFS+G LPNF LPEAGPNSPGD QLN GN I+ G + + CNGE++A+ V + WN+++IGNDG+E ++DVFYATY +QLWVR LQPHMDPSLYEALN+ +RLN+TC + ++GC+EFT NFT+ATPYN T PY F D C HGFS+GE+V +V V AASP GPTS++SLG +ILAGKADQGLPWSEGF+ DG KDDEFWS+WW T Y S W Sbjct: 17 KICCFALVALLPTTAVSASQFTTTDGCNFTFSDGQLPNFRLPEAGPNSPGDVQLNLGNNIITRGWVEEDENGTLHSCNGESSAYHVGDDTWNTTYIGNDGDELEVDVFYATYQNQLWVRHLQPHMDPSLYEALNDTTIRLNITCAKMDHSSSLQNGCLEFTVNFTEATPYNYTEPYEFVDDCSHGFSSGEQVQSVVVHAASPIGPTSSASLGVGNALILAGKADQGLPWSEGFNEDGSRKDDEFWSDWWATVDSRYVSTEESVVSW 282
BLAST of mRNA_M-pyrifera_M_contig10201.436.1 vs. uniprot
Match: D7FS83_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS83_ECTSI) HSP 1 Score: 226 bits (575), Expect = 2.420e-66 Identity = 111/187 (59.36%), Postives = 137/187 (73.26%), Query Frame = 2 Query: 983 GVPNGMCYGCCSQYIKYSLSRQADGRRRLELDAESDCTGSTSEVWDASEGEWVSTFYTLDEQTHEIDMFYMTEVDGMNELWVTEIEEWMAPSLYNQLQYNYVKLNLECPL-STVVESCVIFEPRFTNWSPDIDGSMAGYRFSDPAVPTFDVPE----TGGDVLLTSDNTIVQKTGEATETNCNGDQA 1528 G +G G + Y +Q+ LE + E CTGS+++ WD GEW STF T+D ++H++DMFYM+ VDG+NELWVTEIE WMAPSLYNQLQYNYVKL L CP + VV+SCVIFEP FTNWSPD+DG+ AGYRFSDPA+P+FD+PE + GDVLLT+ N++V KTG TET CNGD A Sbjct: 59 GSDDGEICGGHNAMSTYEFRQQSITENALEENEERGCTGSSAQFWDPKNGEWRSTFETIDGESHDLDMFYMSLVDGVNELWVTEIESWMAPSLYNQLQYNYVKLILTCPEDNVVVDSCVIFEPTFTNWSPDVDGAAAGYRFSDPALPSFDIPEAVPNSPGDVLLTTSNSVVTKTGATTETYCNGDSA 245
BLAST of mRNA_M-pyrifera_M_contig10201.436.1 vs. uniprot
Match: D7FPM5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPM5_ECTSI) HSP 1 Score: 156 bits (395), Expect = 6.750e-39 Identity = 99/256 (38.67%), Postives = 142/256 (55.47%), Query Frame = 2 Query: 1088 DCTGSTSEVWDASEGEWVS--TFYTLDEQTHEIDM-----FYMTEVDGMNELWVTEIEEWMAPSLYNQLQYNYVKLNLECPLSTVV----ESCVIFEPRFTNWSPDIDGSMAGYRFSDPAVPTFDVPE----TGGDVLLTSDNTIVQKTGEATETNCNGDQAQYYGEDGQWYSKFIGSDGETYALDHVFYPKTTN-MYAATIQSVWEPNLQALLEQRTLRIRVWCTNDENAE--YLFFRISGES--ATCNDIKGIC 1795 DCTG S + A+ GEW + +F E + M F+ DG E+ V+ I +AP++ + L ++L L C + +SCV+F+ FTN+SP D +MA +RF DPAVP ++P + GD+ L N +V+ G CNGD A+Y GEDG+WY F GSDG+ Y L HVFY + ++ ATIQS W PNL+A L R +R+ + C+N N E YL F+I G+ +C+D G+C Sbjct: 82 DCTGD-SWRYQAANGEWKTELSFPATWESSDAAPMVSFEGFFNATGDG--EITVSGIPTSIAPAVSDSLYGRNIELALTCNQEDQIVMEEDSCVLFQVDFTNYSPTFDVNMALFRFEDPAVPGIEMPLAQPLSPGDIQLNEGNPVVELDGSEVSWGCNGDMAEYLGEDGEWYFWFTGSDGQPYNLTHVFYTTDFDQLHIATIQSAWSPNLEAALHNRYVRLLIHCSNQVNHEDGYLIFKIGGQEFDESCDDHSGLC 334
BLAST of mRNA_M-pyrifera_M_contig10201.436.1 vs. uniprot
Match: A0A814YKZ3_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A814YKZ3_9BILA) HSP 1 Score: 88.2 bits (217), Expect = 7.430e-16 Identity = 58/135 (42.96%), Postives = 73/135 (54.07%), Query Frame = 1 Query: 91 CGLTFSNGSLPNFLLPEAGPNSPGDQQLNEGNPIVESGDTAV---EGCNG-----EAAAFAVDEGLWNSSFIGNDGEEYDLDVFYATYDDQLWVRTLQPHMDPSLYEALNNAVVRLNVTCNENESGCIEFTANFT 471 C +F+ P+F LP A PNSPGDQQLN N I S +A+ +GCNG E A G W +S+ +G DL+VFYAT L V TLQ + +L L +RLN+TCN + GCI FT N T Sbjct: 35 CLYSFTAPQFPSFTLPAAQPNSPGDQQLNLNNNIRLSNGSALNAGQGCNGGRSSGEYAYLNESNGQWMTSYPDVNGRPADLNVFYATAQSALNVATLQTNY-ANLALFLTCKTIRLNITCNNGQKGCIYFTVNCT 168 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10201.436.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig10201.436.1 >prot_M-pyrifera_M_contig10201.436.1 ID=prot_M-pyrifera_M_contig10201.436.1|Name=mRNA_M-pyrifera_M_contig10201.436.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=317bp MIANKCILFLLPAVSPVLFTAAFQYTSDIVCGLTFSNGSLPNFLLPEAGPback to top mRNA from alignment at M-pyrifera_M_contig10201:4883..9351- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig10201.436.1 ID=mRNA_M-pyrifera_M_contig10201.436.1|Name=mRNA_M-pyrifera_M_contig10201.436.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4469bp|location=Sequence derived from alignment at M-pyrifera_M_contig10201:4883..9351- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig10201:4883..9351- >mRNA_M-pyrifera_M_contig10201.436.1 ID=mRNA_M-pyrifera_M_contig10201.436.1|Name=mRNA_M-pyrifera_M_contig10201.436.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1902bp|location=Sequence derived from alignment at M-pyrifera_M_contig10201:4883..9351- (Macrocystis pyrifera P11B4 male)back to top |