mRNA_M-pyrifera_M_contig10200.433.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig10200.433.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI) HSP 1 Score: 110 bits (276), Expect = 1.460e-23 Identity = 109/340 (32.06%), Postives = 145/340 (42.65%), Query Frame = 1 Query: 58 LLLAAGADIDAGTTEGLTPLHFAAGQPGTGHAAAALLXXXXXXXXXXXXXXXXXXXXAQSGHLAATRALLAAGADVTLR--VDDLMLAPLDVAACCGYVEVIIELTRPDGASSDAKVGVGVEARVGVRVDVNAAPDTTGCTALHHAAWKNQAGAVDALVEAGANVAARTVYXXXXXXXXXXXXXXXXXXXXXXXXXXSPSDEVVDQGSEPPLHFAAQQGGKAGAAEAVDLLLRWGADETELDDDGKTAAEVVGADVRQEESLA--ADADRVRELLANAPADRTWRRRGLLLLCLA--------------------RVRNEVNGGDLDGVITSLLEFEEKG 1005 L++A A + + + LH AA Q G A LL ++GHL+ +ALLAA D ++R + + + LD+AA G V+ + + VDVN D G T+LH AA N+ A+D LVEAGA+V V + E D E PL AA+Q G+ G VD+LLR GADET L+ DG+TAAEVVG + D +RVR+LL NAP DR WRRRG L+LC A RVR+ G + G L E ++KG Sbjct: 23 LVVAKVASLQYASVDSSDQLHVAASQGQEGRVAT-LLAGGAKKNGLDAQGRTPLHLAVENGHLSTVKALLAADPDTSVRYRIWNRSYSVLDLAAQKGDACVLRAILQHG-------------------VDVNRRTD--GYTSLHVAALNNRVAAIDVLVEAGAHV---EVEDDDDCTPFLDACINHCHEAALALYKHGSNIEARDIRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDVERVRDLLENAPVDRAWRRRGFLVLCRAFWIKARRLRAASSNASSNGPRVRSLSTGARISGAGGELREDDDKG 337
BLAST of mRNA_M-pyrifera_M_contig10200.433.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI) HSP 1 Score: 108 bits (271), Expect = 3.470e-23 Identity = 82/253 (32.41%), Postives = 117/253 (46.25%), Query Frame = 1 Query: 277 ADVTLRVDDLMLAPLDVAACCGYVEVIIELTRPDGASSDAKVGVGVEARVGVRVDVNAAPDTTGCTALHHAAWKNQAGAVDALVEAGANVAARTVYXXXXXXXXXXXXXXXXXXXXXXXXXXSPSDEVVDQGSEPPLHFAAQQGGKAGAAEAVDLLLRWGADETELDDDGKTAAEVVGADVRQEESLAADADRVRELLANAPADRTWRRRGLLLLCLARV-RNEVNGGDLDGVITSLLEFEEKGFFRTIVWYL 1032 AD+ R D ++ LD+ A G+V+ I L GA DA + G ALHHA N+ A+D L+ AGAN + + G L + A + GK G E VDLLLRWGADET + +G AA+ +G V +E+ + + + VR+LLANAPADR WRRR L+LC AR + +++ + + +L E+G FRTIV ++ Sbjct: 150 ADINRRYGDREISALDIGAGEGHVDFIRTLIE-HGADVDAT-------------------NYGGVAALHHATANNKVEAMDVLLRAGANARSMSESGHTVLHMAAITRTRTEAATLAVLLKHGADVNAQTVGGTSVLEYVATRAGKQGIVEVVDLLLRWGADETHVAGNGMRAADAIGMKVPEEDRIPEEFEGVRKLLANAPADRAWRRRCSLVLCRARPDKMQLSSDRIARLEARVLGLVEEGIFRTIVRFI 382
BLAST of mRNA_M-pyrifera_M_contig10200.433.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE) HSP 1 Score: 108 bits (271), Expect = 9.110e-23 Identity = 101/295 (34.24%), Postives = 134/295 (45.42%), Query Frame = 1 Query: 58 LLLAAGADIDAGTTEGLTPLHFAAGQPGTGHAAAALLXXXXXXXXXXXXXXXXXXXXAQSGHLAATRALLAAGADVTL--RVDDLMLAPLDVAACCGYVEVIIELTRPDGASSDAKVGVGVEARVGVRVDVNAAPDTTGCTALHHAAWKNQAGAVDALVEAGANVAARTVYXXXXXXXXXXXXXXXXXXXXXXXXXXSPSDEVVDQGSEPPLHFAAQQGGKAGAAEAVDLLLRWGADETELDDDGKTAAEVVGADVRQEESLA--ADADRVRELLANAPADRTWRRRGLLLLCLA 930 L++A A + + + + LH +A Q G A LL ++GHL+ +ALLAA D ++ R+ + + LD AA G V+ + + VDVN D G T+LH AA N+ A+D LVEAGA+V V + E D E PL AA+Q G+ G VD+LLR GADET L+ DG+TAAEVVG + D +RVR+LL NAPADR WRRRGLL+LC A Sbjct: 72 LVMAKVASLLSESVDSSDQLHVSASQ-GQEVRVATLLAEGAKKNGLDAQGRTPLHLAVENGHLSTVKALLAADPDTSVHYRIWNRSYSVLDFAAQKGDACVLRAILQHG-------------------VDVNRRTD--GYTSLHVAALNNRVAAIDVLVEAGAHV---EVEDDDDCTPFLDACSNHCHEAALALFKHGANIEARDMRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDLERVRDLLENAPADRAWRRRGLLVLCRA 341
BLAST of mRNA_M-pyrifera_M_contig10200.433.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE) HSP 1 Score: 104 bits (260), Expect = 5.530e-21 Identity = 108/371 (29.11%), Postives = 154/371 (41.51%), Query Frame = 1 Query: 13 TVTHCRA-DRRGRLIDLLLAAGADIDAGTTEGLTPLHFAAGQPGTGHAAAALLXXXXXXXXXXXXXXXXXXXXAQSGHLAATRALLAAGADVTLRVDDLMLAPLDVAACCGYVEVI---------IELTRPDG-----------------------------ASSDAKVGVGVEARV---GVRV-----------------------DVNAAPDTTGCTALHHAAWKNQAGAVDALVEAGANVAARTVYXXXXXXXXXXXXXXXXXXXXXXXXXXSPSDEVVDQGSEPPLHFAAQQGGKAGAAEAVDLLLRWGADETELDDDGKTAAEVVGADVRQEESLAADADRVRELLANAPADRTWRRRGLLLLCLA 930 T H A + ++ LL + GA D+ ++G TPL AAG+ G++AAT+ALL AGAD + + + + LD A C GY +V+ + ++ DG A++ A + G + + GV + DVNA + G TAL A+ ++A A+D L EAGAN+ A+ S + ++ PLH A + G G AE VDLLLR GADET + ++G TAA++V + +SLA D DRVR+LLA APADR WRRRG L+L A Sbjct: 376 TALHIAAIEDEADMVLLLCSKGAGKDSINSQGSTPLQMAAGE----------------------------------GNVAATQALLDAGADASSQSEGEASSALDCAVCQGYTDVVRVKIEHEIDVNISDVDGKTALHHAVAAGKVEMGCTPLHLVAMAGRAAAAQALLDAGADVALRQNGVGLSSXXXXXXXXXXXXXXXXXXHGGDVNAKVNN-GITALRVASAFDKAPAIDVLTEAGANIEAQA----NGSTPLHVASQEGRLAAGIALLRHGASVGKKNAAAQTPLHLVAAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVVLKTEESDSLAEDVDRVRKLLARAPADRAWRRRGFLILSRA 707
BLAST of mRNA_M-pyrifera_M_contig10200.433.1 vs. uniprot
Match: D7G137_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G137_ECTSI) HSP 1 Score: 102 bits (255), Expect = 5.930e-21 Identity = 95/187 (50.80%), Postives = 113/187 (60.43%), Query Frame = 1 Query: 472 TALHHAAWKNQAGAVDALVEAGANVAARTVYXXXXXXXXXXXXXXXXXXXXXXXXXXSPSDEVVDQGSEPPLHFAAQQGGKAGAAEAVDLLLRWGADETELDDDGKTAAEVVGADVRQEESLAADADRVRELLANAPADRTWRRRGLLLLCLARVRNEVNGGDLDGVITSLLEFEEKGFFRTIVWYL 1032 TALH AA N+A A+D LV AGA++ AR + XXXXXXXXXXXXXXXXXXXXX A+ G + G+ + V LLLRWGADET + GKTAA+ +G R + D +R R LL APADR WRRRGLL+LC A GGDL G++ +L EE G FRTIV YL Sbjct: 204 TALHWAAKANRANAIDVLVGAGADIQARNMSGSRPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXAKVGQRRGSVQVVGLLLRWGADETIVCKQGKTAADRIGTR-RFPSTEPGDDERARSLLTRAPADRAWRRRGLLVLCHAYPDRLQLGGDLAGLVDRVLGLEEVGVFRTIVLYL 387
BLAST of mRNA_M-pyrifera_M_contig10200.433.1 vs. uniprot
Match: D7G1U1_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U1_ECTSI) HSP 1 Score: 98.6 bits (244), Expect = 1.960e-19 Identity = 58/112 (51.79%), Postives = 71/112 (63.39%), Query Frame = 1 Query: 697 AQQGGKAGAAEAVDLLLRWGADETELDDDGKTAAEVVGADVRQEESLAADADRVRELLANAPADRTWRRRGLLLLCLARVRNEVNGGDLDGVITSLLEFEEKGFFRTIVWYL 1032 A G + G+A+ VDLLLRWGADET + G+TAA+ +G R + D +R R LLA APADR WRRRGLL+LC A GGDL G++ + EE G FRTIV YL Sbjct: 281 AAVGQRHGSAQVVDLLLRWGADETIVSKQGETAADSIGTR-RCHRTDPEDDERARSLLARAPADRAWRRRGLLVLCRAHPDRLQLGGDLAGLVAGVGGLEEVGVFRTIVLYL 391
BLAST of mRNA_M-pyrifera_M_contig10200.433.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE) HSP 1 Score: 98.2 bits (243), Expect = 2.920e-19 Identity = 62/155 (40.00%), Postives = 83/155 (53.55%), Query Frame = 1 Query: 682 PLHFAAQQGGKAGAAEAVDLLLRWGADETELDDDGKTAAEVVGADVRQEESLAADADRVRELLANAPADRTWRRRGLLLLC------------------------------LARVR--------NEVNGGDLDGVITSLLEFEEKGFFRTIVWYL 1032 PL A +Q G+ GAAE V+ LLR GADET + G A +++G DV +E+ L D +RVRELLANAPADR WRRRG L++C +AR R +E GG+ V++ ++ +E+G FRTIV YL Sbjct: 246 PLMKAGRQAGRQGAAEVVNSLLRAGADETIANVQGNKAVDMIGEDVEEEDRLTEDVERVRELLANAPADRAWRRRGYLIMCRAQPDRVPERRMTSGTHYTNVARRTRSRAKMARARGIAGESTVDESTGGNWAVVVSKVISLQEEGIFRTIVEYL 400
BLAST of mRNA_M-pyrifera_M_contig10200.433.1 vs. uniprot
Match: D8LCR2_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCR2_ECTSI) HSP 1 Score: 86.7 bits (213), Expect = 2.700e-15 Identity = 85/284 (29.93%), Postives = 116/284 (40.85%), Query Frame = 1 Query: 241 HLAATRALLAAGA---------DVTLRVDDLMLAPLDVAACCGYVEVIIELTRPDGASSDAKVGVGVEARVGVRVDVNAAPDTTGCTALHHAAWKNQAGAVDALVEAGANVAARTVYXXXXXXXXXXXXXXXXXXXXXXXXXXSPSDEVV-----------DQGSEPPLHFAAQQGGKAGAAEAVDLLLRWGADETELDDDGKTAAEVVGADVRQEESLAADADRVRELLANAPADRTWRRRGLLLLCLARVRNEVNGGDLDGVITSLLEFEEKGFFRTIVWYL 1032 H+ +ALL AGA D T+R L LA R + A + A VG+G DV + D G +ALH A ++ VDAL+E GA+V ART P V+ D+ PLH AA D+LLR GADET D+D T A+++ + L ++LLANAPADR WRRRG L++ A+ N D V+ L++ + + FR IV +L Sbjct: 137 HVGVAKALLKAGAGPNVLFTTGDPTVRFSPLYLA------------------RRNAAMTSALVGMGA--------DVTSV-DNIGYSALHWAVRDGRSDVVDALIEVGADVEARTSRMISYYSDGGHCMKGMTPLHEAAYQGNYPGMLVLLQKGRANANAQDEHGHSPLHILCMNPQVCSAAACSDILLRSGADETATDEDRHTPADIMASSEGHNGWL-------QQLLANAPADRAWRRRGTLVMLRAQGVQAENEATTDAVLPRLVDLQNEALFRHIVRFL 386
BLAST of mRNA_M-pyrifera_M_contig10200.433.1 vs. uniprot
Match: D8LQI9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQI9_ECTSI) HSP 1 Score: 83.2 bits (204), Expect = 1.500e-14 Identity = 117/325 (36.00%), Postives = 150/325 (46.15%), Query Frame = 1 Query: 58 LLLAAGADIDAGTTEGLTPLHFAAGQPGTGHAA--AALLXXXXXXXXXXXXXXXXXXXXAQSGHLAATRALLAAGADVTLRVDDLMLAPLDVAACCGYVEVIIELTRPDGASSDAKVGVG--------------------VEARVGVRVDVNAAPDTTGC-TALHHAA--WKNQAGAVDALVEAGANVAARTVYXXXXXXXXXXXXXXXXXXXXXXXXXXSPSDEVVDQGSEPPLHFAAQQGGKAGAAEAVDLLLRWGADETELDDDGKTAAEVVGA----DVRQEESLAADADRVRELLANAPADRTWRRRGLLLL---CLARV 936 +LL G+++DA T TPLH AA + GHA + LLXXXXXXXXXXXXXXXXXXXX A A+ LR + +PL++AA G+ +V+ L D + D G G V +G DVN + C T LH A K G V AL+E G+N+ AR ++DQ PLH A + G V+LLLRWGADE ++ GKT A+V+ D EE AD R+R +L +APADR+WRRRG L+L C RV Sbjct: 1 MLLLKGSNVDATTGYRETPLHLAASK---GHALCISELLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGACANYGLRTEGTRCSPLEIAAHGGHADVLKALLDKDSSQLDDTDGEGWAALHYAAVVDGPVRDNGDAVRVLLGAGADVNETNNNDSCFTPLHIAVNGRKVSDGTVRALLEGGSNIHARA---------------------------------LLDQ---TPLHIACKHASVTG----VELLLRWGADEKLTNNVGKTPADVIRPRRQNDFDDEEEREADNQRIRRMLEHAPADRSWRRRGWLVLSRSCPTRV 282
BLAST of mRNA_M-pyrifera_M_contig10200.433.1 vs. uniprot
Match: A0A6H5K8N6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8N6_9PHAE) HSP 1 Score: 79.7 bits (195), Expect = 8.260e-13 Identity = 93/322 (28.88%), Postives = 133/322 (41.30%), Query Frame = 1 Query: 31 ADRRGRLIDLLLAAGADIDA--GTTEGLTPLHFAAGQPGTGHAAAALLXXXXXXXXXXXXXXXXXXXXAQSGHLAATRALLAAGADVTLRVDDLMLAPLDVAACCGYVEVIIELTRPDGASSDAKVGVGVEARVGVRVDVNAAPDTTGCTALHHAA-WKNQAGAVDALVEAGANVAAR-----TVYXXXXXXXXXXXXXXXXXXXXXXXXXXSPSDEVVDQGSEPPLHFAAQQGGKAGAAEAVDLLLRWGADETELDDDGKTAAEVVGAD--------------VRQEESLAADADRVRELLANAPADRTWRRRGLLLLCLA 930 +D + +++ LLAAGA +A G EG PLH A+ + G L A+ +AAT ALL AGA D PL +AAC G +++I L + VDVN+ D G TALH AA + A AV ALV+AGA + + + + ++V ++ PL A Q + G VDLLLRWG D+T + DG+TA+E++ D + Q++ + R R LL+ A DR WRRR L ++ A Sbjct: 41 SDEQEQIVADLLAAGACPNARFGGEEGYAPLHVASSRGHVGILTTLLSFGAHRDAVDNRGARPLHHAIAED-RVAATEALLVAGALGATPEDSSSFRPLVLAACKGSIDIINVLLKHG-------------------VDVNSRDDVVGATALHAAANCASGASAVHALVDAGAEINVQRKDGGSPLHYAAASRASSSPSSPFETILALLQRGASVNQVHSGTAQTPLLLACQHRPR-GLGSVVDLLLRWGGDDTVVGGDGRTASELLELDQHHHATETEHHQCHLEQDDEIG----RARTLLSRAKEDRAWRRRCLPVMLRA 337 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10200.433.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig10200.433.1 >prot_M-pyrifera_M_contig10200.433.1 ID=prot_M-pyrifera_M_contig10200.433.1|Name=mRNA_M-pyrifera_M_contig10200.433.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=345bp AVIGTVTHCRADRRGRLIDLLLAAGADIDAGTTEGLTPLHFAAGQPGTGHback to top mRNA from alignment at M-pyrifera_M_contig10200:6893..8530- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig10200.433.1 ID=mRNA_M-pyrifera_M_contig10200.433.1|Name=mRNA_M-pyrifera_M_contig10200.433.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1638bp|location=Sequence derived from alignment at M-pyrifera_M_contig10200:6893..8530- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig10200:6893..8530- >mRNA_M-pyrifera_M_contig10200.433.1 ID=mRNA_M-pyrifera_M_contig10200.433.1|Name=mRNA_M-pyrifera_M_contig10200.433.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2070bp|location=Sequence derived from alignment at M-pyrifera_M_contig10200:6893..8530- (Macrocystis pyrifera P11B4 male)back to top |