mRNA_M-pyrifera_M_contig10199.428.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig10199.428.1
Unique NamemRNA_M-pyrifera_M_contig10199.428.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig10199.428.1 vs. uniprot
Match: D7FZC2_ECTSI (Similar to Imprinted and ancient n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZC2_ECTSI)

HSP 1 Score: 290 bits (741), Expect = 9.940e-95
Identity = 155/240 (64.58%), Postives = 170/240 (70.83%), Query Frame = 1 
Query:    1 RALASPPQLRIRVSEIPLVSLHLHLPAGYPSRDLPVAEIRAPGLAHKARNKLAEG-TVGGPSTDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLQEDSVEIFHGEAFTDRKSTFQAHLAKVYSERQVDWVRRRLLENSKIARATHNIAAWRIWDEVKGVQLHDNDDDGESAAGSRLAHMLAITRAQNVLVVVSRWFGGIHLGPDRFKHINNAARELLVKCGDTAATGSNGG 717
            R  A+ PQLRIRVSEIPLVSLHL LP GYPSRD P  EI+APGL   AR K+ E  T G P+ DG                                    +  E+ VEIFHG+AFTDRKSTFQAHLA+V SE QV WVRRRL+EN K+ARATHN+AAWR+WDE +GVQLHDNDDDGESAAGSRLAHMLAIT AQNV+VVVSRW+GGIHLGPDRFKHINNAARELLV CG T A    GG
Sbjct:   39 RGSAASPQLRIRVSEIPLVSLHLRLPVGYPSRDFPELEIKAPGLGQAARRKIREDYTSGSPAADGGDNNDGDEQTVSSLTATAGKFDEDEEGGEEPLEAE-LPAEEYVEIFHGQAFTDRKSTFQAHLARVSSESQVTWVRRRLMENGKVARATHNVAAWRVWDEARGVQLHDNDDDGESAAGSRLAHMLAITGAQNVVVVVSRWYGGIHLGPDRFKHINNAARELLVYCGATKADAEVGG 277
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BLAST of mRNA_M-pyrifera_M_contig10199.428.1 vs. uniprot
Match: A0A7S1XJK1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XJK1_9STRA)

HSP 1 Score: 176 bits (447), Expect = 2.680e-50
Identity = 85/122 (69.67%), Postives = 100/122 (81.97%), Query Frame = 1 
Query:  322 EIFHGEAFTDRKSTFQAHLAKVYSERQVDWVRRRLLENSKIARATHNIAAWRIWDEVKGVQLHDNDDDGESAAGSRLAHMLAITRAQNVLVVVSRWFGGIHLGPDRFKHINNAARELLVKCG 687
            EI HGE FTDR+STFQAH A V SE +V  VR  L++N KIARATHNIAAWR++DE + V +HDNDDDGE+AAG R+A +LA+T A NV+VVVSRW+GGIHLGPDRFKHINNAAR +L   G
Sbjct:  173 EIVHGEPFTDRRSTFQAHAAVVSSEAEVFAVREALMQNGKIARATHNIAAWRLFDEHRDVVIHDNDDDGETAAGGRMAELLALTGASNVVVVVSRWYGGIHLGPDRFKHINNAARAILEHMG 294
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BLAST of mRNA_M-pyrifera_M_contig10199.428.1 vs. uniprot
Match: A0A0G4G690_VITBC (RWD domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4G690_VITBC)

HSP 1 Score: 167 bits (423), Expect = 7.060e-47
Identity = 82/133 (61.65%), Postives = 100/133 (75.19%), Query Frame = 1 
Query:  307 QEDSVEIFHGEAFTDRKSTFQAHLAKVYSERQVDWVRRRLLENSKIARATHNIAAWRIWDEVKGVQLHDNDDDGESAAGSRLAHMLAITRAQNVLVVVSRWFGGIHLGPDRFKHINNAARELLVKCGDTAATG 705
            ++  ++I HG+   DRKS FQAHLA+V+  R V  V+R L+ N KIARATHNI A+RI    +G QL D+D DGESAAG RL H+L+I    N++VVVSRW+GGIHLGPDRFKHINNAAREL+VKCG  A  G
Sbjct:  151 EQCEIDIVHGDPIIDRKSVFQAHLARVHDTRDVQAVQRALMRNQKIARATHNIMAYRI-QTAQGHQLSDHDSDGESAAGGRLQHLLSIVNTSNIMVVVSRWYGGIHLGPDRFKHINNAARELMVKCGVIADEG 282
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BLAST of mRNA_M-pyrifera_M_contig10199.428.1 vs. uniprot
Match: A0A6H5J932_9PHAE (RWD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J932_9PHAE)

HSP 1 Score: 166 bits (420), Expect = 7.340e-47
Identity = 101/212 (47.64%), Postives = 114/212 (53.77%), Query Frame = 1 
Query:   19 PQLRIRVSEIPLVSLHLHLPAGYPSRDLPVAEIRAPGLAHKARNKLAE---------------------GTV--------------------GGPSTDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLQEDSVEIFHGEAFTDRKSTFQAHLAKVYSERQVDWVRRRLLENSKIARATHNIAAWRIWDEVKGVQLHDNDDDGE 531
            PQLRIRVSEIPLVSLHL LP GYPSRD P  EI+APGL   AR KL E                     GTV                    G P+ DG                                    +  E+ +EIFHG+AFTDRKSTFQAHLA+V SE QV  VRRRL+EN K+ARATHN+AAWR+WDE +GVQLHDNDDDG+
Sbjct:   45 PQLRIRVSEIPLVSLHLRLPVGYPSRDFPELEIKAPGLGQAARRKLREALLPSASPSSEAVEVAKPSPGGTVVVFDWVETLRDLLSRTDYTSGSPAADGGDDNDGDETTVSTLPATTGKFDEDEEAGEEPLEAE-LPAEEYMEIFHGQAFTDRKSTFQAHLARVSSESQVTRVRRRLMENGKVARATHNVAAWRVWDEDRGVQLHDNDDDGK 255
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BLAST of mRNA_M-pyrifera_M_contig10199.428.1 vs. uniprot
Match: A0A196SH50_BLAHN (IMPACT protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SH50_BLAHN)

HSP 1 Score: 164 bits (415), Expect = 4.110e-46
Identity = 80/122 (65.57%), Postives = 97/122 (79.51%), Query Frame = 1 
Query:  322 EIFHGEAFTDRKSTFQAHLAKVYSERQVDWVRRRLLENSKIARATHNIAAWRIWDEVKGVQLHDNDDDGESAAGSRLAHMLAITRAQNVLVVVSRWFGGIHLGPDRFKHINNAARELLVKCG 687
            E+F  EAFTDRKSTFQAH A+V+SE  V  V + L  N+KI RATHN+ A+RI+DE +GV + DNDDDGESAAGSR+ H+L +   +NV+VVVSRW+GGI LGPDRFKHINNA R +L KCG
Sbjct:  122 EVFSDEAFTDRKSTFQAHCAEVHSEEDVKLVLQYLHSNNKIQRATHNMYAYRIYDEKRGVWIQDNDDDGESAAGSRMLHLLNMMDVKNVIVVVSRWWGGILLGPDRFKHINNATRNVLEKCG 243
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BLAST of mRNA_M-pyrifera_M_contig10199.428.1 vs. uniprot
Match: D8M6F8_BLAHO (UPF0029 domain-containing protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M6F8_BLAHO)

HSP 1 Score: 160 bits (405), Expect = 8.920e-45
Identity = 78/122 (63.93%), Postives = 96/122 (78.69%), Query Frame = 1 
Query:  322 EIFHGEAFTDRKSTFQAHLAKVYSERQVDWVRRRLLENSKIARATHNIAAWRIWDEVKGVQLHDNDDDGESAAGSRLAHMLAITRAQNVLVVVSRWFGGIHLGPDRFKHINNAARELLVKCG 687
            E+F  EAFTDRKSTFQAH A+++SE+    V   L  N+KI RATHN+ A+RI+DE +GV + +NDDDGESAAGSR+A +L I   +NV+VVVSRW+GGI LGPDRFKHINNA R +L KCG
Sbjct:   82 EVFSDEAFTDRKSTFQAHCAEIHSEQDAKLVLEYLYSNNKIQRATHNMWAYRIYDENRGVWIEENDDDGESAAGSRMALLLNIMNVKNVMVVVSRWWGGILLGPDRFKHINNATRNVLEKCG 203
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BLAST of mRNA_M-pyrifera_M_contig10199.428.1 vs. uniprot
Match: F2UJV7_SALR5 (RWD domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UJV7_SALR5)

HSP 1 Score: 159 bits (403), Expect = 2.090e-43
Identity = 78/121 (64.46%), Postives = 93/121 (76.86%), Query Frame = 1 
Query:  325 IFHGEAFTDRKSTFQAHLAKVYSERQVDWVRRRLLENSKIARATHNIAAWRIWDEVKGVQLHDNDDDGESAAGSRLAHMLAITRAQNVLVVVSRWFGGIHLGPDRFKHINNAARELLVKCG 687
            I HGE FTDRKSTFQ H+A V+S   V  V   LL NSKIARATHN+ A+RIWD+ +GV + D DDDGE  A SR+ H+L +T A+NVLVVVSRWFGGI LGPDRFKHINN  R+++V+ G
Sbjct:  193 IDHGEPFTDRKSTFQGHVATVHSVADVKAVMAELLSNSKIARATHNMVAYRIWDDDRGVWVQDCDDDGEHGASSRMLHVLQLTDARNVLVVVSRWFGGILLGPDRFKHINNCTRDVMVEFG 313
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BLAST of mRNA_M-pyrifera_M_contig10199.428.1 vs. uniprot
Match: A0A7S4FB89_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FB89_CHRCT)

HSP 1 Score: 154 bits (390), Expect = 1.740e-42
Identity = 76/127 (59.84%), Postives = 95/127 (74.80%), Query Frame = 1 
Query:  310 EDSVEIFHGEAFTDR-KSTFQAHLAKVYSERQVDWVRRRLLENSKIARATHNIAAWRIWDEVKGVQLHDNDDDGESAAGSRLAHMLAITRAQNVLVVVSRWFGGIHLGPDRFKHINNAARELLVKCG 687
            E+ V++ HGE  T   KSTFQAH A+V +  QV W  RRLLE+ K+ RATHNI A+R +D  +GVQ+ DNDDDGE+AAG RLA +L +  A NVL++VSRW+GGIHLGPDRFK+I+N AR LL   G
Sbjct:  104 ENEVDLVHGEPVTPPGKSTFQAHFARVSTANQVQWAIRRLLEDRKVGRATHNIIAYRYFDAQRGVQVSDNDDDGENAAGGRLAALLELMDANNVLIIVSRWYGGIHLGPDRFKYISNCARALLESQG 230
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BLAST of mRNA_M-pyrifera_M_contig10199.428.1 vs. uniprot
Match: A0A7S2ATP6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ATP6_9STRA)

HSP 1 Score: 151 bits (381), Expect = 1.910e-42
Identity = 75/119 (63.03%), Postives = 92/119 (77.31%), Query Frame = 1 
Query:  325 IFHGEAFTDRKSTFQAHLAKVYSERQVDWVRRRLLENSKIARATHNIAAWRIWDEVKGVQ--LHDNDDDGESAAGSRLAHMLAITRAQNVLVVVSRWFGGIHLGPDRFKHINNAARELL 675
            +  G  FT +KSTFQAHL  V+S+ QVDW  RRLLEN K+ARATHNI A+R  DE  GVQ  + DND+DGE AAG++LA MLA+  A +V+VVVSRW+GG+ LGPDRF+ INN ARE+L
Sbjct:    1 VITGAPFTSKKSTFQAHLGVVHSKDQVDWFMRRLLENRKVARATHNIMAYRFVDESLGVQSVIADNDEDGEDAAGAKLAQMLALMHANDVVVVVSRWYGGVKLGPDRFRIINNVAREVL 119
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BLAST of mRNA_M-pyrifera_M_contig10199.428.1 vs. uniprot
Match: A0A6J2WSV8_CHACN (protein IMPACT n=1 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2WSV8_CHACN)

HSP 1 Score: 155 bits (393), Expect = 4.200e-42
Identity = 81/134 (60.45%), Postives = 98/134 (73.13%), Query Frame = 1 
Query:  301 VLQEDSVEIFHGEAFTDRKSTFQAHLAKVYSERQVDWVRRRLLENSKIARATHNIAAWRIWDEVKGVQLHDNDDDGESAAGSRLAHMLAITRAQNVLVVVSRWFGGIHLGPDRFKHINNAARELLVKCGDTAAT 702
            ++ E+   I HGEA TDR+STFQ HLA V S +QV  V  +L EN KIA ATHNI A+RI+ E K   L D +DDGE+AAG RL H+L I  A+NVLVVVSRW+GGI LGPDRFKHINN AR +L++ G T +T
Sbjct:  167 LVDEELPPIHHGEAITDRRSTFQPHLAPVVSPKQVRMVLDKLYENKKIASATHNIYAYRIYCEDKNTFLQDCEDDGETAAGGRLLHLLQILDARNVLVVVSRWYGGILLGPDRFKHINNCARNILIQEGYTEST 300
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10199.428.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZC2_ECTSI9.940e-9564.58Similar to Imprinted and ancient n=1 Tax=Ectocarpu... [more]
A0A7S1XJK1_9STRA2.680e-5069.67Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A0G4G690_VITBC7.060e-4761.65RWD domain-containing protein n=1 Tax=Vitrella bra... [more]
A0A6H5J932_9PHAE7.340e-4747.64RWD domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A196SH50_BLAHN4.110e-4665.57IMPACT protein n=1 Tax=Blastocystis sp. subtype 1 ... [more]
D8M6F8_BLAHO8.920e-4563.93UPF0029 domain-containing protein n=1 Tax=Blastocy... [more]
F2UJV7_SALR52.090e-4364.46RWD domain-containing protein n=1 Tax=Salpingoeca ... [more]
A0A7S4FB89_CHRCT1.740e-4259.84Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S2ATP6_9STRA1.910e-4263.03Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6J2WSV8_CHACN4.200e-4260.45protein IMPACT n=1 Tax=Chanos chanos TaxID=29144 R... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig10199contigM-pyrifera_M_contig10199:2337..9310 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score89.4
Seed ortholog evalue8.1e-16
Seed eggNOG ortholog2880.D7FZC2
Preferred nameIMPACT
KEGG rclassRC00024,RC00080,RC00329
KEGG koko:K00135,ko:K01476
KEGG ReactionR00551,R00713,R00714,R02401
KEGG Pathwayko00220,ko00250,ko00310,ko00330,ko00350,ko00650,ko00760,ko01100,ko01110,ko01120,ko01130,ko01230,ko05146,map00220,map00250,map00310,map00330,map00350,map00650,map00760,map01100,map01110,map01120,map01130,map01230,map05146
KEGG ModuleM00027,M00029,M00134
Hectar predicted targeting categoryother localisation
GOsGO:0000122,GO:0000302,GO:0000902,GO:0001932,GO:0001933,GO:0003674,GO:0003779,GO:0003785,GO:0004857,GO:0004860,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005844,GO:0006355,GO:0006357,GO:0006417,GO:0006446,GO:0006469,GO:0006950,GO:0006979,GO:0007154,GO:0007275,GO:0007399,GO:0008092,GO:0008150,GO:0009267,GO:0009268,GO:0009314,GO:0009411,GO:0009416,GO:0009605,GO:0009628,GO:0009636,GO:0009653,GO:0009719,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010225,GO:0010243,GO:0010447,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010563,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0010720,GO:0010941,GO:0014070,GO:0016043,GO:0016049,GO:0019207,GO:0019210,GO:0019219,GO:0019220,GO:0019222,GO:0019887,GO:0022008,GO:0030030,GO:0030154,GO:0030182,GO:0030234,GO:0031175,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031333,GO:0031399,GO:0031400,GO:0031667,GO:0031668,GO:0031669,GO:0031952,GO:0031953,GO:0032056,GO:0032058,GO:0032268,GO:0032269,GO:0032270,GO:0032501,GO:0032502,GO:0032989,GO:0032990,GO:0032991,GO:0033554,GO:0033673,GO:0034198,GO:0034248,GO:0034250,GO:0034599,GO:0034614,GO:0034644,GO:0035690,GO:0040007,GO:0042149,GO:0042221,GO:0042325,GO:0042326,GO:0042493,GO:0042542,GO:0042594,GO:0043021,GO:0043022,GO:0043086,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043254,GO:0043549,GO:0043555,GO:0043558,GO:0043618,GO:0043620,GO:0044087,GO:0044092,GO:0044424,GO:0044464,GO:0044877,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045727,GO:0045859,GO:0045892,GO:0045934,GO:0045936,GO:0045948,GO:0046677,GO:0048468,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048588,GO:0048589,GO:0048666,GO:0048699,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0050767,GO:0050769,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0051338,GO:0051348,GO:0051716,GO:0051960,GO:0051962,GO:0060255,GO:0060284,GO:0060548,GO:0060560,GO:0060733,GO:0060992,GO:0065007,GO:0065009,GO:0070301,GO:0070887,GO:0071214,GO:0071236,GO:0071262,GO:0071264,GO:0071310,GO:0071407,GO:0071417,GO:0071467,GO:0071468,GO:0071478,GO:0071482,GO:0071494,GO:0071495,GO:0071496,GO:0071840,GO:0072755,GO:0080090,GO:0080134,GO:0080135,GO:0097201,GO:0097237,GO:0098772,GO:0104004,GO:0120036,GO:0120039,GO:1901561,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902679,GO:1903506,GO:1903507,GO:1990138,GO:1990253,GO:1990497,GO:1990904,GO:1990928,GO:2000026,GO:2000112,GO:2000113,GO:2000765,GO:2001141
EggNOG free text desc.response to benomyl
EggNOG OGsCOG1739@1,KOG3299@2759
EC1.2.1.16,1.2.1.20,1.2.1.79,3.5.3.1
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons6
Model size819
Cds size228
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig10199.428.1prot_M-pyrifera_M_contig10199.428.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig10199 2370..3033 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815520.4236677-UTR-M-pyrifera_M_contig10199:2336..23691622815520.4236677-UTR-M-pyrifera_M_contig10199:2336..2369Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig10199 2337..2369 -
1692277447.6205819-UTR-M-pyrifera_M_contig10199:2336..23691692277447.6205819-UTR-M-pyrifera_M_contig10199:2336..2369Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig10199 2337..2369 -
1622815520.4546802-UTR-M-pyrifera_M_contig10199:3033..30651622815520.4546802-UTR-M-pyrifera_M_contig10199:3033..3065Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig10199 3034..3065 -
1692277447.6647308-UTR-M-pyrifera_M_contig10199:3033..30651692277447.6647308-UTR-M-pyrifera_M_contig10199:3033..3065Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig10199 3034..3065 -
1622815520.4662879-UTR-M-pyrifera_M_contig10199:3996..41201622815520.4662879-UTR-M-pyrifera_M_contig10199:3996..4120Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig10199 3997..4120 -
1692277447.6739957-UTR-M-pyrifera_M_contig10199:3996..41201692277447.6739957-UTR-M-pyrifera_M_contig10199:3996..4120Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig10199 3997..4120 -
1622815520.4780679-UTR-M-pyrifera_M_contig10199:5355..55231622815520.4780679-UTR-M-pyrifera_M_contig10199:5355..5523Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig10199 5356..5523 -
1692277447.6829867-UTR-M-pyrifera_M_contig10199:5355..55231692277447.6829867-UTR-M-pyrifera_M_contig10199:5355..5523Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig10199 5356..5523 -
1622815520.4916515-UTR-M-pyrifera_M_contig10199:5925..59871622815520.4916515-UTR-M-pyrifera_M_contig10199:5925..5987Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig10199 5926..5987 -
1692277447.6924613-UTR-M-pyrifera_M_contig10199:5925..59871692277447.6924613-UTR-M-pyrifera_M_contig10199:5925..5987Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig10199 5926..5987 -
1622815520.5076573-UTR-M-pyrifera_M_contig10199:9138..93101622815520.5076573-UTR-M-pyrifera_M_contig10199:9138..9310Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig10199 9139..9310 -
1692277447.7130995-UTR-M-pyrifera_M_contig10199:9138..93101692277447.7130995-UTR-M-pyrifera_M_contig10199:9138..9310Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig10199 9139..9310 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815520.4343894-CDS-M-pyrifera_M_contig10199:2369..25471622815520.4343894-CDS-M-pyrifera_M_contig10199:2369..2547Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10199 2370..2547 -
1692277447.6336353-CDS-M-pyrifera_M_contig10199:2369..25471692277447.6336353-CDS-M-pyrifera_M_contig10199:2369..2547Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10199 2370..2547 -
1622815520.4447203-CDS-M-pyrifera_M_contig10199:2983..30331622815520.4447203-CDS-M-pyrifera_M_contig10199:2983..3033Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10199 2984..3033 -
1692277447.6515996-CDS-M-pyrifera_M_contig10199:2983..30331692277447.6515996-CDS-M-pyrifera_M_contig10199:2983..3033Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10199 2984..3033 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig10199.428.1

>prot_M-pyrifera_M_contig10199.428.1 ID=prot_M-pyrifera_M_contig10199.428.1|Name=mRNA_M-pyrifera_M_contig10199.428.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=76bp
MLAITRAQNVLVVVSRWFGGIHLGPDRFKHINNAARELLVKCGDTAATGS
NGGTSDKKHADGEGGGKQKGRRKRG*
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mRNA from alignment at M-pyrifera_M_contig10199:2337..9310-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig10199.428.1 ID=mRNA_M-pyrifera_M_contig10199.428.1|Name=mRNA_M-pyrifera_M_contig10199.428.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6974bp|location=Sequence derived from alignment at M-pyrifera_M_contig10199:2337..9310- (Macrocystis pyrifera P11B4 male)
CGCGCGCTTGCTTCGCCACCGCAGCTTCGCATCCGAGTATCGGAGATCCC
ACTCGTCAGCCTCCACCTCCACCTTCCTGCCGGCTACCCGTCCCGCGACC
TGCCCGTGGCGGAGATAAGAGCGCCGGGCCTTGCCCACAAGGCACGGAAC
AAACTCGCCGAAGGTACAGTAGGTCAACACCTTGAGGCCTTAAGGAGAGT
GCACCCCTCCTTGCGGGAACAAACCGCTTGGAATTGGAGTCAGGTTTAGG
TTTGTGTGCGGTTTAGTTGCTGCAGTAGAAAAGGGTCGACGTAAACGGTA
CTGCTGTTTGGCATATGATGGGACCCTGCTTCAAAACGGACCTAGATATT
TCAAGGGAAGATGATGTCTTCCTAGCCGTGTATGGTCTACTGTGCTGCTG
AAGTTCATGTTGCCGGGTGGGACCCGTGTAATCTGCATGATTTGCTGTAG
CAGATGTTTCCTGGGTTGGACCTATCTGCCCTATAAGGCAGATGCTGCAC
AGTCCCTCACGACGGAAAGTCAGGAGCTGTAGATGATCTAGATCATGATC
TGTCTGTAGATGAGCTGTCCGACCTGTAGAGGAGACTTTTTCTCGGTCGG
GCGGGCGGCATGGATCTCCGGCGTCAGATTTCCTGCAACAGGACACATTC
CCTGAGTTCCACAGCAGTCGCATATCGTGTTATAATTAAGTAAAGGATCA
AGTGGTCTCCCTGGCAAGATCTGCATCTGCTGTCGTCGGGCTTTGGGGTC
CCCTTCTTCTATGTGGATGGTGTGATGGGAACAAGCGCTTTCATAAATTT
ATCATGGCAACTATACTTACTAAGACATTGTCGGAGGGCACAATTATTAA
TGATGAAGGATACTCGAACATATGTGCCCTACATGAGGTCATATAAAACC
CGTGTGTCTGTAGTACGCACGATCGAAGCATCAGACACAGCTCGCAAAGA
TGTCTTTGGACAAACTCGTCGATTCCACGGCTGATGGTTCTTTTTTGTAT
TATTATTTTCTATCATGATAGAACCTGCCTGCTTCACCCAGCTCGAAAGT
ATCAAGGCATGCCCTACGATTTTCGCGGTCGTGTAAATTTTAGCAACTCG
CTTCTCTCGAAGATAAATTCAGTCTTCTTGGTTATTTTGTGTGTGTGTGT
GTGTTTTTTCTTTGGAGGGGAGGGCGTTCGTATTACTAATGACTGCTCGT
GCGAGGATTGATATTTGAGCTGTCGACGCTGTGAGAAGACAAACATAATG
TCACTTTGGCTGGCAATTTATGGCTCGGTTGGCATCCGCATCACAGTCCA
CACCATATTTACATTCCCGGGCAAAATGACATTATATTTTAATAGACATG
CCTACGCGTCAACACTTCGTGAATTAGACCTTCTTCTTGAGTATCAAGTA
TCAAAGGCAAGAAGTGAAACCTCCCCAGAAGTTGACCTGGAGAGAAAAAC
GGAGGACCGTTACATTGAAATGGCACGCTGGTACAAATTTAGCATGTTAA
TCGGAGATGCCCCAACGACCGAACGATCGATCGAAAATATCGGCAAACTG
TACTACTTGCTGCTGTACGTGTTATCCCCTTTTTTACGACTGCACTCACC
GTTTGGTGGAGAAAAAACACTCGAAATTTGACCGAGAACAGTACGGTGGG
ATATAGCAATGATAACCTGATATGGCGTGTGAACATAAGAGGATGCCTGC
CTTTTTCGGTCCTGTGTGCGTTCGGATTACCAACTGATACCAGGTACCAG
GTATGTATTACTATGCCCCGCCAAGGCAATAAATAGTACCAGGTGGACTT
TTTTCACTAAAAATGCCCTTCACAAATCTGCACCCGCGTTTTCGAGCGGT
AACAATGGTGACAAATTGGAATAAAGAGGAGGACCTTTTTGCAATGCGAG
TGGTAGTGAAAAGGGTCCACGTATCGGACAGATTACGGTATGCTGCAGAT
CAAAACCACGACGAACTCCAGCGATCCCAGCAGATGAGCTCCGGCGATCC
CAGGCATTGATGCTCCGGCAATCCCAGGCATTGATGCTCCGACAATCCCA
GGCATTGATGCCCCGGCGATCCCAAGCGTAGATGCCCCGGCGACCCCAGG
CGGGTGATGCAGCTGCGATCCCAGGCAGCGATGCTCCGGCGATTCCAGGC
GACGATGCTGTGGCGATCGCAGGATGCTCCAGCGATCCAAGGCGATGGGC
TCCGACGATCGATGTGCTTGGAGTATGAGCAGAAAAACACTTTTTGCAGC
ACAGGTATATGCTGCAGTCGTTGAAACGAGTTGACGCAGCGAGCGCGAAG
CACGAATCGGCTAGGAAAAAAAAAAAGACCTAATACTCGCCACGAGATAT
TCTTCGGCTTGACCTTGTATTGCACGCGGGTCGAAGCGGACTACAGTAAG
TGTTTTTTTCGTTTCACTTTCCTGGGCGGATTGGCTGACCCAAGGCTTAA
ATTTAATTCCAAAACATTTTCGCGTACGAGTCAACTGGGCGTGTGTCGAT
TCAAGCAGGGATCTTCATGAGTCATCACCGAACGCGCAGGTCTGGTCTGG
AAGTTTTTTTTTATTATCACGGATCAGGTCCGGTCCGGTCGGGTCGGGTC
GGGTCAGGTCGAGTCGGGTTGGGTCGGGTCGGATCGGGTCGAGCCAATTC
GAGTCAGGAGGCTTTCGCACTCTCACGGGTCGGGTCGGGCCATCCTTTCA
CCCGACCCGACCTGACCCGCGAGGTTTGATCCGACCCGTTAACAAGCCTG
GATTTTAGTCTGTGGTGGGACACATCTCGGCCGTAAAGCACAACGGCACT
GCCGTGGTGTAGTATGCAGTACGGCATGAGTGTGGACGTCGAGGGCCCTG
TGCCACACCACAACCCACAACCTTGTTTTCGGGGGATCGGGTTTGCCCTT
GTCAAAACTCTTTCGCGCCTCCGACAGATCATCAACTCCGATTGTTCCCA
CCTCATGACCATAGATATTTCAGGGAAGATTATCTGTATGATATGTATGG
TATGTATGATCAAGCAGCATGTTGCCCGTGGGAGCCGTAAAACCTGCACG
GTTTAGGACATGTTTTCTGGGCTGGATTCGACTGACAATGTACATCTATA
CAGATCCTGTCCAAAATATCTTAACCGGCAGGTTGGGATACACATGATCC
ATAGATAGATCATGAACTGTGAAAACGTGCGAAAAAAAACAAATTCCGTT
TCTGACTCTTCCCCTTTCCGTTCCGCCGCCCGCGTCCGCTGCCCGCACCC
ACTGCCCCGTCCTTTTCGCGTGTCTACTGGTGCTCCCGCGCCGTAGCCAT
TCAGCCTCAAAATCGGGGGGAAGGCGGCCCAAGCACGGACGGGGGCGGGA
GGGGGGGGGGCACCGAAGCATCCCCTGCCGGAACGGTGGTAATTTTCGAC
TGGGCGGAAACCCTCCGGGACTCCCTGTCCCGAACGGGTCATCACCACCT
CTATCCTTCCACCGTCACCGCCTCCACCGCGCAGGATGAGGAATCTTCTT
ACGCTTCTTCGTCGGCAGCCGCGACGGCGAACGAGGCAACAGAAATAGAA
GCGGCGGTAGCAGCAGTAGCAGCATTTGAAGCTGCGTCAGCAGGATCAGC
AGCAGTGACGGCGGCGGTGATGGAGGGGTTGGCAGGCCAGACTATGTCGG
CCGACCAGGGTACGGCGAACTCCTACTTCGGAAGTCGGGGAACCGTCCGC
GGTGGTGGCGGCGGCGGCGGTGGTAGCGGTGGCAATAATAGTGGGGGGTG
GAAAGCAGACGGTACTGCCATGGGCGAGGGGAGACAGACGGCACGGGGTG
GGGGTGCGGCGAGAAGAGCCCCCCCCGCCGGAGAGGGGGGGGCTGAAGAA
GAGGTGCTGCAGGAGGATTCTGTAGAGATTTTTCACGGCGAGGCGTTTAC
CGACCGGAAAAGCACGTTTCAGGCACACCTGGCGAAGGTGTACTCTGAGA
GACAGGTAGAATGTTGGGCGGTGTGTGGGGGGGGGTATTTCATCACACTT
TTACAGGTAGTTTTCATTTATTTGTCGAATGCTACACCAAACTTGCTACT
GCACAGTACGCGGTCTAAGTAGTCTTAAGTCCCGTCCCTTTTCGTTTGGT
TAAAGCGCGGGTAAGCGCAGAAGGGGGGCGTGATTGTCGCATCTTGTTGA
GGGCTAAAGTCGCCATGCATCGAAATCCCGTGGAAGCAGCATACACTGTC
CCCCTCCCCCCCTCCCTCCCCCTATCCCTTCAAGGATAGATGCAATCAGG
CAGTGGATGAACGGCGTGGTGGATGGACGCAGGCGCCAAAAATAGTGGTC
CTTCCCCCCTCCCCCCCCCCACCCCCCATTCGACACTGTCATCCGTATGC
AAGCAAGTCTGCCTCACAAGCGGTTCTTAGTGGGATGCAGCTCATCCTAT
GTACGACTCGCCGACCACCTCACGGCGCTCCGCGCCTGGTGCAAGCGATG
TCTGTCTGGTCGGTGAAAACCCGACTCGCTCCGTCCCGGCACTGTGCTTA
GGGATGCTATAGTCTTTGATCATACGACTACGGCCGTGCCTGACATGAGT
TTGTTTACGTTCTTCACACCGTTCTTTCTACCGGTCGACATCGAGTGTCG
TGCCGATTCTTCAATCCGAGTTTTTTTTTCTTCCTTTTTTCTAATCATCA
CTTTCACTTTCCAGCTTAGCTAGTAGGAAGTTTTTACCCTCAGCGGTCTT
CTTCTGGACAAGCCGTGGTCACAGGTGTCGTCCCTTCTCCCCCCCGGTAC
GTGCCTTCATTTTTATAGCGCATAGGGTTCAGCATTGACACTCCCTTGTC
GATTTTCATCGAATGTAGCTAACTCGCGCTTTCGCGCTTTCCGCTAATCA
ATTCGTATGCGAGAAAAAATCCTTACGAGTACGTATGCACTCGCCGAAAC
TTGAACCCACGAAATTGATCTTAGTAGGCACGCAGACCACCTACCAAGCC
AGCGGGGACGCCGAAAGATCTGTGGTCACAAAAACACGACACATGAGATA
CTATATTTGAATGCAGTACATACAAAGTAGATAATACAATGCCATGTTCA
TCGTACTGGATACGACGAGCACGACATTCACATGCTAGCAATCCAGATAC
GGCTGAAAGAGCTAAAAACGAGCAAAAAAAAAAAAAAGAAAAAAGTGTAC
ACCCCTTCCCACCCCTCCCACACCTCCCCTCCTTCCGCAGGTGGATTGGG
TGAGGCGTCGACTACTAGAAAACAGTAAAATTGCGCGCGCGACGCACAAC
ATTGCCGCATGGAGAATATGGGACGAGGTCAAGGGAGTTCAGCTTCACGA
CAACGATGACGATGGTAAAAGGGGGTGAACTGGTGCATGCCTGGAATATT
GCGGTTGCTTCAATCTTGCTTTTGTTTTTGTTTTTCGTATGGCTGCACTT
TTATGTTTTACGAAGTATGTGGGCAGTTACAAAAAGTAATGAATATGTCT
TCAGCAGTTTACGCAAGCCCTCGTTGTTGCCGATGCGTCTGGCGTCGAAT
CTAGGTTGAGCCGCATCATACTTCACAGCAGGTTGGCAGCAGTGTCGGAC
CTAGGTTACGCCACATGGGCTCTCGGTTGCCCCGCATCGAACACAGACCG
CGTCGCACGGGGCAGTACTGGATCACGAGTAGCCTCTGGGACCCAGGTGC
TATGACCACTAAATAGGACAGATAGAATTTTTTTCAAACAATCTAGGAAA
AATATACAACAAAATACGAGCACCTTTATCATGGGGCGTGGCCTTGCGTG
TCGTACACTTCTTCACTCGAATTTCGGGCGCATCGTCTATCCCCTATCCC
AGCTGCCGGGGCTGCTTCGTGTGGCCAATCATGCTGAATTTTTTATTTGT
TTGCGTCATCTCCACCCCCCTCGGAAGTCCCGAAGCCCAAGGGAATGAGA
GCCGCATGGGCTCTACTGCAGGTTGCGCTCCATCGAACCTAGGTTGCGCC
GCATTATCCATACGTTTTTTGCCGCAGCATCGGACGTAGATGGACCCGCA
ACGCCTTGTCAAACCCTAGGCTTGGCCGCATGGGCCATTGACCCTAGATT
GCGCCGTATCAGTCCTAGGTTGCGCGAAATCGGCGCTGCTGGGTCTTCTT
CTTCGCCCCCCCTGCCCCCACTCCTCGCCTCACCTCCCCACCCTGCTCCC
ACCCCCTACCCACGCACCCACCCACCCACCCACCCATCCACCCTAATCCC
GCATAGTGTGCGAACGTGTCCCCCCCTACATGTTTTCTTGCTAAGGCGAG
AGCGCTGCAGGCAGCAGGCTGGCGCACATGCTGGCCATCACCCGCGCTCA
AAACGTCCTGGTCGTGGTCTCCCGCTGGTAAGAGGTGGTTTGGTTGCGCC
GAGTGTCTCTCGTTGATCCGTTGATTGTAGATTGGCTCGCGTCCGATAGC
ATGTTATTTCAATCTACAGATGGGCCGACGGTTGCTTGGCTCCCGTCCAA
TTGAACGTTCGTACAGCCTACCGATTGGGTCGATGGACCATCCGTCAGGT
CAATTATCCATCCCGTACTCGTAGACCAGTCATGCCATCGACCATCCACC
CCCTCCATCCCCTGAGCCACCCATCCCATCAAGTATCCCTTCCATTGACC
ACCCATGAACCAGTGATGCCACCGACTTTACATCCCATTAACCATTTATC
CCTCCAACCACCCATTCCGTCAACTATCCATGCCATCAATCAACCATCCC
GTATTACGTCCATGTTATGCCGCCAACGACCCGCCTGCCGTATGCGCCGT
TGTATCGTATCAGGTTCGGCGGTATTCACCTCGGGCCCGACCGTTTCAAG
CACATCAATAACGCCGCCAGGGAACTCCTAGTAAAATGCGGCGATACCGC
CGCCACCGGTAGCAACGGGGGCACGTCTGACAAAAAACATGCGGACGGGG
AAGGAGGTGGCAAGCAGAAGGGAAGACGAAAACGTGGCTAGGATGACGTT
GTTGATCATCATGATAAGGGTGGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig10199:2337..9310-

>mRNA_M-pyrifera_M_contig10199.428.1 ID=mRNA_M-pyrifera_M_contig10199.428.1|Name=mRNA_M-pyrifera_M_contig10199.428.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=456bp|location=Sequence derived from alignment at M-pyrifera_M_contig10199:2337..9310- (Macrocystis pyrifera P11B4 male)
ATGCTGGCCATCACCCGCGCTCAAAACGTCCTGGTCGTGGTCTCCCGCTG
ATGCTGGCCATCACCCGCGCTCAAAACGTCCTGGTCGTGGTCTCCCGCTG
GTTCGGCGGTATTCACCTCGGGCCCGACCGTTTCAAGCACATCAATAACG
CCGCCAGGGAACTCCTAGTAAAATGCGGCGATACCGCCGCCACCGGTAGC
AACGGGGGCACGTCTGACAAAAAACATGCGGACGGGGAAGGAGGTGGCAA
GCAGAAGGGAAGACGAAAACGTGGCTAGGTTCGGCGGTATTCACCTCGGG
CCCGACCGTTTCAAGCACATCAATAACGCCGCCAGGGAACTCCTAGTAAA
ATGCGGCGATACCGCCGCCACCGGTAGCAACGGGGGCACGTCTGACAAAA
AACATGCGGACGGGGAAGGAGGTGGCAAGCAGAAGGGAAGACGAAAACGT
GGCTAG
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