mRNA_M-pyrifera_M_contig101016.219.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig101016.219.1 vs. uniprot
Match: A0A7S4K473_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4K473_9EUKA) HSP 1 Score: 58.5 bits (140), Expect = 2.960e-8 Identity = 30/75 (40.00%), Postives = 44/75 (58.67%), Query Frame = 1 Query: 58 TTTMFDLYRERRVLLVFLRHLGCRFCWKMAADVQS-LAPQLLQFDVHPILVSMGTQAQISAFRSKTSVTMPIFVD 279 T + L+ R++LLVFLRH GCRFC + ++ + P L + +LV++G AQI AFR +T I+VD Sbjct: 3 TVMIPSLFSHRKILLVFLRHFGCRFCRQQVHAIRECVQPVLRRNGCEVVLVALGVPAQIPAFREETGFDGEIYVD 77
BLAST of mRNA_M-pyrifera_M_contig101016.219.1 vs. uniprot
Match: A0A0M0JMS1_9EUKA (Protein phosphatase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JMS1_9EUKA) HSP 1 Score: 58.9 bits (141), Expect = 4.410e-8 Identity = 28/86 (32.56%), Postives = 52/86 (60.47%), Query Frame = 1 Query: 28 SVQLVDERGRTTTMFDLYRERRVLLVFLRHLGCRFCWKMAADVQSLAPQLLQFDVHPILVSMGTQAQISAFRSKTSVT--MPIFVD 279 S+ +++ G ++ L+++RR+LLVFLRH GCRFC + ++ + +L + +LVS+GT QI +R + + + ++VD Sbjct: 592 SLVVLNAEGEAISVPTLWQKRRILLVFLRHFGCRFCKQQVRTMKVVQLRLKEAGTEVVLVSLGTPDQIERYRKELDIPACIEVYVD 677
BLAST of mRNA_M-pyrifera_M_contig101016.219.1 vs. uniprot
Match: A0A7S3C0S9_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3C0S9_9EUKA) HSP 1 Score: 57.0 bits (136), Expect = 2.070e-7 Identity = 29/81 (35.80%), Postives = 45/81 (55.56%), Query Frame = 1 Query: 43 DERGRTTTMFDLYRERRVLLVFLRHLGCRFCWKMAADVQSLAPQLLQFDVHPILVSMGTQAQISAFRSKTSVT--MPIFVD 279 D G + L+R RR+LLV LRH GCRFC + ++ +L + +L+S+G QIS FR+K + + ++VD Sbjct: 23 DTDGNMVEVPTLWRSRRILLVMLRHFGCRFCKQQVHSIKMAHSRLHEGGTEVVLISIGRPDQISRFRAKMGLPDEIEVYVD 103
BLAST of mRNA_M-pyrifera_M_contig101016.219.1 vs. uniprot
Match: A0A518E2Y1_9BACT (Peroxiredoxin n=1 Tax=Lignipirellula cremea TaxID=2528010 RepID=A0A518E2Y1_9BACT) HSP 1 Score: 55.5 bits (132), Expect = 2.810e-7 Identity = 31/86 (36.05%), Postives = 46/86 (53.49%), Query Frame = 1 Query: 22 AASVQLVDERGRTTTMFDLYRERRVLLVFLRHLGCRFCWKMAADVQSLAPQLLQFDVHPILVSMGTQAQISAFRSKTSVTMPIFVD 279 A SV L D G + DL+ ER + L+F+RHLGC C + D++ + + I V+MGT Q +AF++ S+ P F D Sbjct: 14 APSVTLPDTTGADVALADLWAERPLALLFMRHLGCALCREQVDDLRRDYADIQKVGGAAI-VTMGTVEQTAAFKANRSLPFPCFSD 98
BLAST of mRNA_M-pyrifera_M_contig101016.219.1 vs. uniprot
Match: D3ZAK1_RAT (Peroxiredoxin-like 2C n=2 Tax=Rattus norvegicus TaxID=10116 RepID=D3ZAK1_RAT) HSP 1 Score: 53.1 bits (126), Expect = 1.150e-6 Identity = 32/92 (34.78%), Postives = 48/92 (52.17%), Query Frame = 1 Query: 10 PLPAA-ASVQLVDERGRTTTMFDLYRERRVLLVFLRHLGCRFCWKMAADVQSLAPQLLQ-FDVHPILVSMGTQAQISAFRSKTSVTMPIFVD 279 PL AA A + ++D GR T L+RERR ++VF+RH C C + D+ + +LQ DV I++ + I F T + I+VD Sbjct: 29 PLAAAVAELPVLDASGRRVTFGALFRERRAVVVFVRHFLCYVCKEYVEDLAKIPKSVLQEADVTLIVIGQSSYHHIEPFCKLTGYSHEIYVD 120
BLAST of mRNA_M-pyrifera_M_contig101016.219.1 vs. uniprot
Match: UPI0000606E90 (Uncharacterized protein n=3 Tax=Murinae TaxID=39107 RepID=UPI0000606E90) HSP 1 Score: 52.0 bits (123), Expect = 2.870e-6 Identity = 31/92 (33.70%), Postives = 48/92 (52.17%), Query Frame = 1 Query: 10 PLPAA-ASVQLVDERGRTTTMFDLYRERRVLLVFLRHLGCRFCWKMAADVQSLAPQLL-QFDVHPILVSMGTQAQISAFRSKTSVTMPIFVD 279 PL AA A + ++D GR T L+RERR ++VF+RH C C + D+ + +L + DV I++ + I F T + I+VD Sbjct: 29 PLAAAVAELPVLDASGRRVTFGALFRERRAVVVFVRHFLCYVCKEYVEDLAKIPKSVLREADVTLIVIGQSSYHHIEPFCKLTGYSHEIYVD 120
BLAST of mRNA_M-pyrifera_M_contig101016.219.1 vs. uniprot
Match: UPI001B3468EA (peroxiredoxin-like 2C n=2 Tax=Ochotona TaxID=9977 RepID=UPI001B3468EA) HSP 1 Score: 53.1 bits (126), Expect = 2.950e-6 Identity = 32/92 (34.78%), Postives = 47/92 (51.09%), Query Frame = 1 Query: 10 PLPAA-ASVQLVDERGRTTTMFDLYRERRVLLVFLRHLGCRFCWKMAADVQSLAPQLLQ-FDVHPILVSMGTQAQISAFRSKTSVTMPIFVD 279 PL AA A + ++D RGR L+RERR ++VF+RH C C + D+ + LQ DV I++ + I F T + I+VD Sbjct: 29 PLAAAVAELPVLDARGRRVPFGALFRERRAVVVFVRHFLCYICKEYVEDLAKIPKSFLQEADVTLIVIGQSSYHHIEPFCKLTGYSHEIYVD 120
BLAST of mRNA_M-pyrifera_M_contig101016.219.1 vs. uniprot
Match: UPI001917A232 (peroxiredoxin-like 2C isoform X1 n=4 Tax=Muroidea TaxID=337687 RepID=UPI001917A232) HSP 1 Score: 53.1 bits (126), Expect = 3.100e-6 Identity = 32/92 (34.78%), Postives = 48/92 (52.17%), Query Frame = 1 Query: 10 PLPAA-ASVQLVDERGRTTTMFDLYRERRVLLVFLRHLGCRFCWKMAADVQSLAPQLLQ-FDVHPILVSMGTQAQISAFRSKTSVTMPIFVD 279 PL AA A + ++D GR T L+RERR ++VF+RH C C + D+ + +LQ DV I++ + I F T + I+VD Sbjct: 29 PLAAAVAELPVLDASGRRVTFGALFRERRAVVVFVRHFLCYVCKEYVEDLAKIPKSVLQEADVTLIVIGQSSYHHIEPFCKLTGYSHEIYVD 120
BLAST of mRNA_M-pyrifera_M_contig101016.219.1 vs. uniprot
Match: A0A1Y7VJW5_MOUSE (Peroxiredoxin-like 2C (Fragment) n=2 Tax=Mus musculus TaxID=10090 RepID=A0A1Y7VJW5_MOUSE) HSP 1 Score: 51.2 bits (121), Expect = 3.230e-6 Identity = 28/88 (31.82%), Postives = 45/88 (51.14%), Query Frame = 1 Query: 19 AAASVQLVDERGRTTTMFDLYRERRVLLVFLRHLGCRFCWKMAADVQSLAPQLL-QFDVHPILVSMGTQAQISAFRSKTSVTMPIFVD 279 A A + ++D GR T L+RERR ++VF+RH C C + D+ + +L + DV I++ + I F T + I+VD Sbjct: 3 AVAELPVLDASGRRVTFGALFRERRAVVVFVRHFLCYVCKEYVEDLAKIPKSVLREADVTLIVIGQSSYHHIEPFCKLTGYSHEIYVD 90
BLAST of mRNA_M-pyrifera_M_contig101016.219.1 vs. uniprot
Match: UPI001875BD15 (peroxiredoxin-like 2C isoform X6 n=1 Tax=Manis pentadactyla TaxID=143292 RepID=UPI001875BD15) HSP 1 Score: 52.4 bits (124), Expect = 3.770e-6 Identity = 31/92 (33.70%), Postives = 46/92 (50.00%), Query Frame = 1 Query: 10 PLPAA-ASVQLVDERGRTTTMFDLYRERRVLLVFLRHLGCRFCWKMAADVQSLAPQLLQ-FDVHPILVSMGTQAQISAFRSKTSVTMPIFVD 279 PL AA A + ++D GR L+RERR ++VF+RH C C + D+ + P LQ V I++ + I F T + I+VD Sbjct: 31 PLAAAVAELPVLDASGRRVPFGALFRERRAVVVFVRHFLCYICKEYVEDLAQIPPSFLQEASVSLIVIGQSSYHHIEPFCKLTGYSYEIYVD 122 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101016.219.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig101016.219.1 >prot_M-pyrifera_M_contig101016.219.1 ID=prot_M-pyrifera_M_contig101016.219.1|Name=mRNA_M-pyrifera_M_contig101016.219.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=93bp MSTPLPAAASVQLVDERGRTTTMFDLYRERRVLLVFLRHLGCRFCWKMAAback to top mRNA from alignment at M-pyrifera_M_contig101016:122..400+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig101016.219.1 ID=mRNA_M-pyrifera_M_contig101016.219.1|Name=mRNA_M-pyrifera_M_contig101016.219.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=279bp|location=Sequence derived from alignment at M-pyrifera_M_contig101016:122..400+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig101016:122..400+ >mRNA_M-pyrifera_M_contig101016.219.1 ID=mRNA_M-pyrifera_M_contig101016.219.1|Name=mRNA_M-pyrifera_M_contig101016.219.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=558bp|location=Sequence derived from alignment at M-pyrifera_M_contig101016:122..400+ (Macrocystis pyrifera P11B4 male)back to top |