mRNA_M-pyrifera_M_contig101004.215.1 (mRNA) Macrocystis pyrifera P11B4 male
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig101004.215.1 vs. uniprot
Match: A0A2D8GEJ2_9ACTN (Glutamine synthetase n=3 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8GEJ2_9ACTN) HSP 1 Score: 330 bits (846), Expect = 2.590e-109 Identity = 158/221 (71.49%), Postives = 181/221 (81.90%), Query Frame = 1 Query: 16 YRELEPAAWYVEDYHLLQSARVEDVMGPARRMLKDAEIPVEGSKGEAAIGQHELNVRYGDVLEMADSHTIMKHGLKALVDSMGASVTFMAKPDAAQPGNSCHLHISLWADGRNLFADPDAADG--RSDLFRWFLGGWMQHTPDLMVCYAPTVNSYKRFQSASWAPTRVAWSTDNRTVGFRVVGDGRVGDGSSLRIECRIPGGDVNPYLAVAAALASGLDGI 672 YR+LE A WYVEDYHLLQ++RVED +G ARR ++D+EIPVE SKGEAAIGQHELN+RY +VL+MAD H +MK G+K L D++G SVTFMAKPD+AQPGNSCH+H+SLW DG N+FA AD RSDLFRWFLGGW+ H PDLM APT+NSYKR++ SWAPTR+AWSTDNRT GFRVVG G S LRIE RIPG DVNPYLA AAALASGLDGI Sbjct: 158 YRDLEAAGWYVEDYHLLQASRVEDYVGAARRAMRDSEIPVENSKGEAAIGQHELNIRYAEVLDMADRHVVMKQGMKELADALGVSVTFMAKPDSAQPGNSCHIHLSLWKDGVNVFAGEAGADDDERSDLFRWFLGGWIHHAPDLMPFVAPTINSYKRYRDQSWAPTRLAWSTDNRTAGFRVVGTG-----SGLRIENRIPGADVNPYLAYAAALASGLDGI 373
BLAST of mRNA_M-pyrifera_M_contig101004.215.1 vs. uniprot
Match: A0A800ID10_9ACTN (Glutamine synthetase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A800ID10_9ACTN) HSP 1 Score: 329 bits (844), Expect = 4.740e-109 Identity = 160/219 (73.06%), Postives = 174/219 (79.45%), Query Frame = 1 Query: 16 YRELEPAAWYVEDYHLLQSARVEDVMGPARRMLKDAEIPVEGSKGEAAIGQHELNVRYGDVLEMADSHTIMKHGLKALVDSMGASVTFMAKPDAAQPGNSCHLHISLWADGRNLFADPDAADGRSDLFRWFLGGWMQHTPDLMVCYAPTVNSYKRFQSASWAPTRVAWSTDNRTVGFRVVGDGRVGDGSSLRIECRIPGGDVNPYLAVAAALASGLDGI 672 YR+L+ A WYVEDYHLLQ ARVED +G ARR+L + +PVE SKGEAAIGQHELN+RY DVL MAD H +MK +K L D G SVTFMAKPDA QPGNSCHLH+SLW N F D DGRSDLFRWFLGGWM+H DLM CYAPTVNSYKR+Q ASWAPTR+AWSTDNRT GFR+VG G S LRIE RIPGGDVNPYLA AAALASGLDGI Sbjct: 157 YRDLQAAGWYVEDYHLLQGARVEDYVGAARRVLTASGVPVENSKGEAAIGQHELNIRYTDVLTMADRHVVMKQAMKELADQQGVSVTFMAKPDADQPGNSCHLHLSLWQGDTNAFVG-DGPDGRSDLFRWFLGGWMRHCADLMPCYAPTVNSYKRYQDASWAPTRIAWSTDNRTAGFRIVGTG-----SGLRIENRIPGGDVNPYLAFAAALASGLDGI 369
BLAST of mRNA_M-pyrifera_M_contig101004.215.1 vs. uniprot
Match: A0A7X6APP2_9ACTN (Glutamine synthetase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X6APP2_9ACTN) HSP 1 Score: 321 bits (822), Expect = 4.240e-106 Identity = 158/219 (72.15%), Postives = 170/219 (77.63%), Query Frame = 1 Query: 16 YRELEPAAWYVEDYHLLQSARVEDVMGPARRMLKDAEIPVEGSKGEAAIGQHELNVRYGDVLEMADSHTIMKHGLKALVDSMGASVTFMAKPDAAQPGNSCHLHISLWADGRNLFADPDAADGRSDLFRWFLGGWMQHTPDLMVCYAPTVNSYKRFQSASWAPTRVAWSTDNRTVGFRVVGDGRVGDGSSLRIECRIPGGDVNPYLAVAAALASGLDGI 672 Y LE A WYVEDYHLLQ ARVED +G ARR L+D+ IPVE SKGEAAIGQHELN+RY +VL MAD H +MK LK L D G SVTFMAKPDA QPGNSCHLH+SLW N FA D RSD+FRWFLGGWM H DLMVCYAPT+NSYKR+Q SWAPTR+AWSTDNRT GFR+VG G SLRIE RIPG DVNPYLA AAALASGLDGI Sbjct: 129 YTGLESAGWYVEDYHLLQGARVEDYVGAARRALRDSGIPVENSKGEAAIGQHELNIRYAEVLAMADRHVLMKEALKELADRQGHSVTFMAKPDADQPGNSCHLHLSLWDGDANAFAGAGPGD-RSDVFRWFLGGWMHHAADLMVCYAPTINSYKRYQDQSWAPTRLAWSTDNRTAGFRIVGSG-----PSLRIENRIPGADVNPYLAYAAALASGLDGI 341
BLAST of mRNA_M-pyrifera_M_contig101004.215.1 vs. uniprot
Match: A0A351EQX7_9ACTN (Glutamine synthetase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A351EQX7_9ACTN) HSP 1 Score: 310 bits (795), Expect = 1.180e-101 Identity = 150/224 (66.96%), Postives = 171/224 (76.34%), Query Frame = 1 Query: 1 ASEGDYRELEPAAWYVEDYHLLQSARVEDVMGPARRMLKDAEIPVEGSKGEAAIGQHELNVRYGDVLEMADSHTIMKHGLKALVDSMGASVTFMAKPDAAQPGNSCHLHISLWADGRNLFADPDAADGRSDLFRWFLGGWMQHTPDLMVCYAPTVNSYKRFQSASWAPTRVAWSTDNRTVGFRVVGDGRVGDGSSLRIECRIPGGDVNPYLAVAAALASGLDGI 672 A E +Y L+ A WYVEDYHL+Q ARVED +G ARR L +EIPVE SKGEAAIGQHELNVRY +VL MAD H +MK G+K L D +G SV+FMAKP A QPG+SCHLH+SLW N F D + SD+FRWFLGGWM HTPDLM YAPTVNSYKR+QS SWAPT++AWS DNRT FR+VG G +S RIECR+PG D NPYLA AAA+ASGLDGI Sbjct: 153 AHEKNYHGLDAAGWYVEDYHLVQGARVEDYVGAARRTLSASEIPVENSKGEAAIGQHELNVRYAEVLTMADRHVVMKQGMKELADQLGVSVSFMAKPHADQPGSSCHLHLSLWQGSANAFTADDGDE--SDIFRWFLGGWMHHTPDLMPLYAPTVNSYKRYQSQSWAPTQIAWSHDNRTASFRIVGTG-----ASRRIECRLPGADTNPYLAFAAAIASGLDGI 369
BLAST of mRNA_M-pyrifera_M_contig101004.215.1 vs. uniprot
Match: A0A7Y2N9E2_9ACTN (Glutamine synthetase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2N9E2_9ACTN) HSP 1 Score: 308 bits (790), Expect = 7.110e-101 Identity = 152/226 (67.26%), Postives = 173/226 (76.55%), Query Frame = 1 Query: 1 ASEGDYRELEPAAWYVEDYHLLQSARVEDVMGPARRMLKDAEIPVEGSKGEAAIGQHELNVRYGDVLEMADSHTIMKHGLKALVDSMGASVTFMAKPDAAQPGNSCHLHISLW--ADGRNLFADPDAADGRSDLFRWFLGGWMQHTPDLMVCYAPTVNSYKRFQSASWAPTRVAWSTDNRTVGFRVVGDGRVGDGSSLRIECRIPGGDVNPYLAVAAALASGLDGI 672 A E Y L+ A WY++DYHLLQ +RVE +G ARR L+ + IPVE SKGEA GQHELN+RY +V MAD H +MKHG+K L D + SVTFMAKP A+ GNSCH+H+SLW A RN+F D DA GRSD+FRWFLGGWM H DLM+CYAPT+NSYKRF+ ASWAPTR+AWS DNRT GFRVVG G SS RIECRIPGGD NPYLA AAALASGLDGI Sbjct: 153 AHELGYSNLKSAGWYIDDYHLLQGSRVESYVGAARRALRTSGIPVENSKGEAGRGQHELNIRYAEVQTMADRHVVMKHGMKELADKLEVSVTFMAKPSTAEAGNSCHIHLSLWDAAGDRNVFVD-DA--GRSDIFRWFLGGWMTHMQDLMICYAPTINSYKRFREASWAPTRLAWSEDNRTAGFRVVGHG-----SSTRIECRIPGGDCNPYLAYAAALASGLDGI 370
BLAST of mRNA_M-pyrifera_M_contig101004.215.1 vs. uniprot
Match: A0A3M2GVY1_ACTSX (Glutamine synthetase n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GVY1_ACTSX) HSP 1 Score: 298 bits (762), Expect = 1.170e-96 Identity = 147/226 (65.04%), Postives = 166/226 (73.45%), Query Frame = 1 Query: 1 ASEGDYRELEPAAWYVEDYHLLQSARVEDVMGPARRMLKDAEIPVEGSKGEAAIGQHELNVRYGDVLEMADSHTIMKHGLKALVDSMGASVTFMAKPDAAQPGNSCHLHISLW--ADGRNLFADPDAADGRSDLFRWFLGGWMQHTPDLMVCYAPTVNSYKRFQSASWAPTRVAWSTDNRTVGFRVVGDGRVGDGSSLRIECRIPGGDVNPYLAVAAALASGLDGI 672 A E Y +L PA WY+EDYHLLQ RVED +G ARR L + IPVE SKGE GQHELN+RY DV MAD HT+MKHG+K L D++G SVTFMAKP + G+SCH+H+SLW G N+F P GRS+LF WFLGGWM H D MV YAPTVNSYKR++ ASWAPTR+AWSTDNRT GFRVVG G SLRIECR+PG D NPYLA AALASGL GI Sbjct: 152 AHEKGYADLVPAGWYIEDYHLLQGRRVEDYVGAARRALSASGIPVESSKGEWGRGQHELNIRYADVATMADRHTVMKHGMKELADALGVSVTFMAKPHTDEAGSSCHIHLSLWDAEAGTNVFDGPG---GRSELFGWFLGGWMAHVADFMVFYAPTVNSYKRYRDASWAPTRIAWSTDNRTAGFRVVGSG-----PSLRIECRLPGADCNPYLAYTAALASGLAGI 369
BLAST of mRNA_M-pyrifera_M_contig101004.215.1 vs. uniprot
Match: A0A6N2DN26_9ACTN (Glutamine synthetase n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A6N2DN26_9ACTN) HSP 1 Score: 295 bits (754), Expect = 2.110e-95 Identity = 145/224 (64.73%), Postives = 163/224 (72.77%), Query Frame = 1 Query: 1 ASEGDYRELEPAAWYVEDYHLLQSARVEDVMGPARRMLKDAEIPVEGSKGEAAIGQHELNVRYGDVLEMADSHTIMKHGLKALVDSMGASVTFMAKPDAAQPGNSCHLHISLWADGRNLFADPDAADGRSDLFRWFLGGWMQHTPDLMVCYAPTVNSYKRFQSASWAPTRVAWSTDNRTVGFRVVGDGRVGDGSSLRIECRIPGGDVNPYLAVAAALASGLDGI 672 AS Y LEPA WYVEDYHLLQ ARVE +G RR L D+ IPVE SKGEA GQHE+N+RY V+EMAD H ++KH +K + D+ G SVTFMAKP A G+S HLH+SLW DG+N F A SD FRWFL GWM H D MVCYAPT+NSYKR++ SWAPTRVAWS DNRT GFRV+G G SLRIECRIPG DVNPYLA AA+LASGL GI Sbjct: 157 ASSAGYAGLEPAGWYVEDYHLLQGARVEPFVGDVRRALSDSGIPVESSKGEAGRGQHEINIRYAHVVEMADRHALLKHAMKEMADTRGTSVTFMAKPHDADVGSSSHLHLSLWRDGQNAFVG--AGGEPSDEFRWFLAGWMAHVDDFMVCYAPTINSYKRYRDLSWAPTRVAWSRDNRTAGFRVLGHG-----PSLRIECRIPGADVNPYLAYAASLASGLLGI 373
BLAST of mRNA_M-pyrifera_M_contig101004.215.1 vs. uniprot
Match: A0A2D5AW16_9BACT (Glutamine synthetase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5AW16_9BACT) HSP 1 Score: 290 bits (741), Expect = 2.370e-93 Identity = 144/226 (63.72%), Postives = 170/226 (75.22%), Query Frame = 1 Query: 1 ASEGDYRELEPAAWYVEDYHLLQSARVEDVMGPARRMLKDAEIPVEGSKGEAAIGQHELNVRYGDVLEMADSHTIMKHGLKALVDSMGASVTFMAKPDAAQPGNSCHLHISLWADGRNLFA-DPDAADGR-SDLFRWFLGGWMQHTPDLMVCYAPTVNSYKRFQSASWAPTRVAWSTDNRTVGFRVVGDGRVGDGSSLRIECRIPGGDVNPYLAVAAALASGLDGI 672 A+E Y ELEP WY+EDYH LQ R E ++G ARR L+D+ +PVE SKGE +GQHE+NVRY DV+EMAD H + K L+ + +G SVTFMAKPDA Q G+SCH+H+SL+ + N FA D + R SD+FR FLGGWM HTPD+M YAPTVNSYKR+Q+ASWAPTR+AWS DNRT GFRVVG G +SLRIECRIPG D NPYLA AA LASGLDGI Sbjct: 160 AAERGYAELEPTGWYIEDYHTLQGTREEALIGAARRHLRDSGVPVENSKGEWGLGQHEINVRYTDVVEMADRHCVYKQCLREVAMELGQSVTFMAKPDAGQSGSSCHIHMSLFCEEENAFAGDRELGPIRCSDVFRHFLGGWMAHTPDVMALYAPTVNSYKRYQAASWAPTRMAWSYDNRTAGFRVVGSG-----ASLRIECRIPGADCNPYLAFAACLASGLDGI 380
BLAST of mRNA_M-pyrifera_M_contig101004.215.1 vs. uniprot
Match: A0A7Y1ZTJ8_9ACTN (Glutamine synthetase n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A7Y1ZTJ8_9ACTN) HSP 1 Score: 288 bits (737), Expect = 1.380e-92 Identity = 146/242 (60.33%), Postives = 169/242 (69.83%), Query Frame = 1 Query: 16 YRELEPAAWYVEDYHLLQSARVEDVMGPARRMLKDAEIPVEGSKGEAAIGQHELNVRYGDVLEMADSHTIMKHGLKALVDSMGASVTFMAKPDAAQPGNSCHLHISLWADGRNLFADPDAA----------------------DGR-SDLFRWFLGGWMQHTPDLMVCYAPTVNSYKRFQSASWAPTRVAWSTDNRTVGFRVVGDGRVGDGSSLRIECRIPGGDVNPYLAVAAALASGLDGI 672 YR+LE A WYVEDYHL Q ARVED +G ARR L +EIPVE SKGEAAIGQHE+NVRY +VL+MAD H +MK +K L ++ G SV+FMAKPDA QPG+SCHLHISL ++ P + DGR +D FRWFLGGWM H P LM YAPT+NSYKR++ SWAPT +AWS DNRT GFR+VG G+ SLRIECR+PG D NPYLA AAALASGLDGI Sbjct: 158 YRDLESAGWYVEDYHLFQGARVEDYVGEARRTLDRSEIPVESSKGEAAIGQHEINVRYAEVLDMADRHVVMKEAMKELAEAQGVSVSFMAKPDATQPGSSCHLHISLSHSPKSGDVGPRSGPSASDFGERGGASVFVSAFVDGDGRPTDEFRWFLGGWMHHVPHLMPLYAPTINSYKRYRHQSWAPTGLAWSHDNRTTGFRIVGSGQ-----SLRIECRLPGADTNPYLAFAAALASGLDGI 394
BLAST of mRNA_M-pyrifera_M_contig101004.215.1 vs. uniprot
Match: A0A7I4FDI5_PHYPA (Gln-synt_C domain-containing protein n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4FDI5_PHYPA) HSP 1 Score: 289 bits (739), Expect = 2.230e-92 Identity = 140/221 (63.35%), Postives = 164/221 (74.21%), Query Frame = 1 Query: 16 YRELEPAAWYVEDYHLLQSARVEDVMGPARRMLKDAEIPVEGSKGEAAIGQHELNVRYGDVLEMADSHTIMKHGLKALVDSMGASVTFMAKPDAAQPGNSCHLHISLWADGRNLFADPDAADGR--SDLFRWFLGGWMQHTPDLMVCYAPTVNSYKRFQSASWAPTRVAWSTDNRTVGFRVVGDGRVGDGSSLRIECRIPGGDVNPYLAVAAALASGLDGI 672 Y L+PA W EDYH+ Q R E GPARR L+ + +PVE SKGE +GQHELNV+Y +VLEMAD H++ K LK L DSMG SVTFMAKPDAAQPG+SCH+H+SLW +GRN+FA SD FRWFLGGWM +TP+LM YAP VNSYKR+ S SWAPT++AWS DNRT FRV+G G+ SLRIECR+PG D N YLA AAALASG+DGI Sbjct: 220 YHNLKPAGWVREDYHIFQGTRGEYFHGPARRHLEASGVPVENSKGEFGLGQHELNVKYAEVLEMADRHSVYKQCLKELADSMGVSVTFMAKPDAAQPGSSCHIHLSLWENGRNIFAGNQTLGSTKCSDEFRWFLGGWMHYTPELMCFYAPNVNSYKRYVSGSWAPTQIAWSRDNRTAPFRVLGSGK-----SLRIECRLPGADCNVYLAFAAALASGMDGI 435 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101004.215.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig101004.215.1 >prot_M-pyrifera_M_contig101004.215.1 ID=prot_M-pyrifera_M_contig101004.215.1|Name=mRNA_M-pyrifera_M_contig101004.215.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=224bp ASEGDYRELEPAAWYVEDYHLLQSARVEDVMGPARRMLKDAEIPVEGSKGback to top mRNA from alignment at M-pyrifera_M_contig101004:3..674+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig101004.215.1 ID=mRNA_M-pyrifera_M_contig101004.215.1|Name=mRNA_M-pyrifera_M_contig101004.215.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=672bp|location=Sequence derived from alignment at M-pyrifera_M_contig101004:3..674+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig101004:3..674+ >mRNA_M-pyrifera_M_contig101004.215.1 ID=mRNA_M-pyrifera_M_contig101004.215.1|Name=mRNA_M-pyrifera_M_contig101004.215.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1344bp|location=Sequence derived from alignment at M-pyrifera_M_contig101004:3..674+ (Macrocystis pyrifera P11B4 male)back to top |