mRNA_M-pyrifera_M_contig100904.197.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig100904.197.1 vs. uniprot
Match: A0A3D1GAN7_9BACT (Omp85 domain-containing protein n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A3D1GAN7_9BACT) HSP 1 Score: 286 bits (732), Expect = 4.790e-93 Identity = 134/221 (60.63%), Postives = 172/221 (77.83%), Query Frame = 1 Query: 1 YYLGDTDKLGYDEARFDSSSYYDFKTFRVDIGGFTRLPIIRNGATNRFDLKIGLRFIYESPWGTPENRFIYAQNIEGREGAFLSLVDLGLIIERRDSEFRAESGYLFNLNTQYAPPGISTHHTVENSVLALGFLPLTKKVP-VTLATRVRFQNTLGKTPYWFTPFLGGGTSLRGYMYRRFTSDNALSYSLELRSWLIKIPFKNIELGANVFADGGKVFSNE 660 Y+LGDT+K D RFDS+SYY+FK F+V++GG TR PI R DL GLRF+YE PWGTPENR++Y Q++ G +GAFL+ ++LG ++ERR++EFRA+ GY N T+ APP ISTH T E LG+LP+ K P +TLA VR ++T+G TPYWF P+LG G++LRGYMYRRF+SDN+LSYS+ELRSWL+KIPFKNIELG N+FADGG+VF+NE Sbjct: 114 YHLGDTEKNPVDRPRFDSTSYYNFKAFKVNVGGSTRFPISLGEGIERMDLLTGLRFVYEKPWGTPENRYLYEQDLTGADGAFLTFLELGWVLERRNNEFRAQQGYYVNAGTKIAPPLISTHTTAEFYTTMLGYLPIFKDDPSLTLAGIVRLRSTVGDTPYWFMPYLGDGSTLRGYMYRRFSSDNSLSYSVELRSWLLKIPFKNIELGVNLFADGGRVFTNE 334
BLAST of mRNA_M-pyrifera_M_contig100904.197.1 vs. uniprot
Match: A0A3M8FNC4_9BACT (Uncharacterized protein n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A3M8FNC4_9BACT) HSP 1 Score: 275 bits (703), Expect = 9.680e-89 Identity = 132/220 (60.00%), Postives = 168/220 (76.36%), Query Frame = 1 Query: 1 YYLGDTDKLGYDEARFDSSSYYDFKTFRVDIGGFTRLPIIRNGATNRFDLKIGLRFIYESPWGTPENRFIYAQNIEGREGAFLSLVDLGLIIERRDSEFRAESGYLFNLNTQYAPPGISTHHTVENSVLALGFLPLTKKVP-VTLATRVRFQNTLGKTPYWFTPFLGGGTSLRGYMYRRFTSDNALSYSLELRSWLIKIPFKNIELGANVFADGGKVFSN 657 Y+ GDTD+ YDEARFDS+ +Y+F RVDIGG R PI R +LK GL IYE P+ T FI + IEGR+GAFLSL +LGLII++R+SEFRA GYL ++ T+Y+P G+STHH ++N + ALGFLPLTK+ P VT+ATR F N+ G+ PYWFTP LGG +LRG++YRRFTSDNALSY++ELR+WLI +PFK+I+LG +VF DGG+VFSN Sbjct: 108 YFFGDTDRQDYDEARFDSTDFYNFDMVRVDIGGVVRTPIEAWDPDKRIELKTGLSLIYERPFDTSATDFINTERIEGRDGAFLSLFELGLIIDQRNSEFRAGQGYLIDVGTRYSPIGLSTHHGIQNYLTALGFLPLTKRFPEVTMATRFSFVNSAGEKPYWFTPALGGSENLRGFIYRRFTSDNALSYTVELRTWLISLPFKSIDLGGHVFMDGGRVFSN 327
BLAST of mRNA_M-pyrifera_M_contig100904.197.1 vs. uniprot
Match: A0A3D2IFB7_9BACT (Uncharacterized protein n=4 Tax=Bacteroidetes/Chlorobi group TaxID=68336 RepID=A0A3D2IFB7_9BACT) HSP 1 Score: 148 bits (374), Expect = 1.910e-39 Identity = 81/220 (36.82%), Postives = 123/220 (55.91%), Query Frame = 1 Query: 1 YYLGDTDKLGYDEARFDSSSYYDFKTFRVDIGGFTRLPIIRNGATNRFDLKIGLRFIYESPWGTPENRFIYAQNIEGREGAFLSLVDLGLIIERRDSEFRAESGYLFNLNTQYAPPGISTHHTVENSVLALGFLPLTK--KVP-VTLATRVRFQNTLGKTPYWFTPFLGGGTSLRGYMYRRFTSDNALSYSLELRSWLIKIPFKNIELGANVFADGGKVF 651 Y+ G T G+ + RFD++S+Y F +F ++IG TR+P+ R D+KIGLR ++E P+ F+ +G EG+ S +++G + E RD EF ++SG LF+L + + PGIS+ + F T K+P + A R +T+G PYWF P LGG S RGY+YRRF + + E+R+WL K+P+ LG + F D G V+ Sbjct: 110 YFPGYTVDGGFSKERFDTTSFYHFNSFLLNIGVETRIPLSAIIDIRRTDIKIGLRVVHERPFDLISGSFMETNRPKGWEGSTYSFLEIGYLKENRDDEFSSKSGSLFSLGLKTSVPGISSSWIGQIFSEFRAFKQFTNPGKIPEIVFAQRFLVNHTIGDIPYWFAPSLGGAGSARGYIYRRFVGKGLVQSNTEIRTWLFKLPWLEARLGVSGFIDNGIVY 329
BLAST of mRNA_M-pyrifera_M_contig100904.197.1 vs. uniprot
Match: A0A6C1P3K4_9BACT (Omp85 domain-containing protein n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A6C1P3K4_9BACT) HSP 1 Score: 97.4 bits (241), Expect = 4.750e-20 Identity = 68/212 (32.08%), Postives = 103/212 (48.58%), Query Frame = 1 Query: 40 ARFDS----SSYYDFKTFRVDIGGFTRLPIIRNGATNRFDLKIGLRFIYESPWGTPENRFIYAQNIEGREGAFLSLVDLGLIIERRDSEFRAESGYLFNL--NTQYAPPGISTHHTVENSVLA--LGFLPLTKKVPVTLATRVRFQNTLGKTPYWFTPFLGGGTSLRGYMYRRFTSDNALSYSLELRSWLIKIPFKNIELGANVFADGGKVF 651 + FDS S +Y F + R+P+ R+ R D+ GL YE T + + G G + + V +GL E RDSEF G +L + + G +V + L+ +GF L +V LA ++ + +G PYW P LGG T+LRGY +RRF + +++YS E+R+W I+LG +F DGG+VF Sbjct: 168 SAFDSDLWNSDHYFFTSLSASGNLRARIPVSRSAGQRRLDVVPGLGVSYERAV-TNDLTLMETDPPVGVGGGWFNTVGIGLNWENRDSEFLPTRGNRADLRIDASHRLLGSDFSGSVIRTSLSQYIGFRLLLDQV---LAMQISYNQAIGTVPYWKLPSLGGETTLRGYAFRRFLDNASVNYSAEIRNWFFHHEATGIQLGGQIFMDGGRVF 375
BLAST of mRNA_M-pyrifera_M_contig100904.197.1 vs. uniprot
Match: A0A371QP24_9BACT (Omp85 domain-containing protein n=1 Tax=Rhodohalobacter sp. SW132 TaxID=2293433 RepID=A0A371QP24_9BACT) HSP 1 Score: 80.1 bits (196), Expect = 5.340e-14 Identity = 51/185 (27.57%), Postives = 83/185 (44.86%), Query Frame = 1 Query: 106 RLPIIRNGATNRFDLKIGLRFIYESPWGTPENRFIYAQNIEGREGAFLSLVDLGLIIERRDSEFRAESGYLFNLNTQYAPPGISTHHTVENSVLALGFL--PLTKKVPVTLATRVRFQNTLGKTPYWFTPFLGGGTSLRGYMYRRFTSDNALSYSLELRSWLIKIPFKNIELGANVFADGGKVFS 654 R P+ + D + L+ Y S E Y + +++ + GL+ + R++EF +SG + + + ++ L + PL V LA R ++ +G TP+W P LG LRG+ RF D+++ Y ELR WL+ I LGA++F D G+VFS Sbjct: 149 RTPLFDITGESALDGALRLKTSYTSATEDGEETRFYTDPPSHFDAGWVNTLGAGLLFDSRENEFAPKSGQRHEIGIDISSSLFGSSYSFYELFADLSYYLSPLENTV---LAQRFTARHNIGDTPFWELPALGSSRGLRGFALDRFMGDSSVLYMAELRQWLVSFLDDEIRLGAHLFFDTGRVFS 330
BLAST of mRNA_M-pyrifera_M_contig100904.197.1 vs. uniprot
Match: A0A2V7IB66_9BACT (Omp85 domain-containing protein (Fragment) n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A2V7IB66_9BACT) HSP 1 Score: 54.3 bits (129), Expect = 4.270e-5 Identity = 39/130 (30.00%), Postives = 63/130 (48.46%), Query Frame = 1 Query: 274 IERRDSEFRAESGYLFNLNTQYAPPGIS-THHTVENSVLALGFLPLTKKVPV--TLATRVRFQNTLGKTPYWFTPFLGGGTSLRGYMYRRFTSDNALSYSLELRSWLIKIPFKNI-ELGANVFADGGKVF 651 ++ RD A G F Y P + T E A +L T ++P+ TLA R+ + G P++ ++GG T++RG++ RF D A+S ++ELR + + F ELG D G+V+ Sbjct: 219 LDTRDQPRAARRGIAFGFGGSYYPKALDVTSPFGEGHAEASSYL--TARIPLQPTLALRIAGKKVWGTYPFYEAAYVGGATTVRGFVEHRFAGDAAVSGNIELRLSVARFFFLVPGELGVFGLGDAGRVY 346
BLAST of mRNA_M-pyrifera_M_contig100904.197.1 vs. uniprot
Match: A0A843T8Q3_9BACT (BamA/TamA family outer membrane protein n=1 Tax=Gemmatimonas sp. TaxID=1962908 RepID=A0A843T8Q3_9BACT) HSP 1 Score: 53.5 bits (127), Expect = 9.880e-5 Identity = 32/96 (33.33%), Postives = 51/96 (53.12%), Query Frame = 1 Query: 370 VENSVLALGFLPLTKKVPVTLATRVRFQNTLGKTPYWFTPFLGGGTSLRGYMYRRFTSDNALSYSLELRSWLIKIPFKNI--ELGANVFADGGKVF 651 V +S A + + + T+A R LG P+ + +GGG+SLRGY RFT D ++ S ELRS + ++ + ++G + AD G+VF Sbjct: 720 VRSSATAATYFGVPLPLESTVALRAGGAWVLGDAPFQYAATVGGGSSLRGYRTNRFTGDQSVFGSAELRSLIGRVDLRIARGDIGTILLADLGRVF 815 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100904.197.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig100904.197.1 >prot_M-pyrifera_M_contig100904.197.1 ID=prot_M-pyrifera_M_contig100904.197.1|Name=mRNA_M-pyrifera_M_contig100904.197.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=220bp YYLGDTDKLGYDEARFDSSSYYDFKTFRVDIGGFTRLPIIRNGATNRFDLback to top mRNA from alignment at M-pyrifera_M_contig100904:14..673- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig100904.197.1 ID=mRNA_M-pyrifera_M_contig100904.197.1|Name=mRNA_M-pyrifera_M_contig100904.197.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=660bp|location=Sequence derived from alignment at M-pyrifera_M_contig100904:14..673- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig100904:14..673- >mRNA_M-pyrifera_M_contig100904.197.1 ID=mRNA_M-pyrifera_M_contig100904.197.1|Name=mRNA_M-pyrifera_M_contig100904.197.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1320bp|location=Sequence derived from alignment at M-pyrifera_M_contig100904:14..673- (Macrocystis pyrifera P11B4 male)back to top |