mRNA_M-pyrifera_M_contig10089.194.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig10089.194.1 vs. uniprot
Match: D7G3H2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3H2_ECTSI) HSP 1 Score: 864 bits (2232), Expect = 5.350e-288 Identity = 620/1326 (46.76%), Postives = 730/1326 (55.05%), Query Frame = 1
Query: 1 AGCPPPIEVVHAFGSCPDRVRDNMCLLGDQRVAYAVGSRVAVTDVEGGGV--GGSGA--LTFLSTGLRVSRVSAVACSADKRFVAMCFKAV--DEPH--TAYATVYHMPTQPRPSRVKTLSYERPRRXXXXXXXXXXDASEGSRCAPD----------LNSSGTGVTSRSSKRWAPAAVAAVTGATSVTTAEFVTANFSHDDRILALLDGGPEWTLLWFEWKTGKKMCTLELGSPVHRVVSSPLDQSKTATAGANGLFRIWRTHAGGKVAPMAPIAGLRENVCYRDVTWLNGDRLVLAAHEGIVVLISPSDVLQEWDVYAGGKLDGPTSFRSRDPNPGQENSTFLETDGNFYSG-HGGGLNVVAAHGMGFLVGGDSGRVLVFEEDRKEGGAAA-RDAYTLTRVVRVFAVDLVELKPSEGSNYRWLLAGAGDGEIGLLDSHELFSRSSSTVIPDGDSSTSSSPSVSGDGPTRRVRASETRGKGETLQVALPAVPRSSSRHAPKKSRGVNGGNVQPISTGTAAGVXXXXXXXXGLETSXXXXXXXGGCGGEVIPRGFAKAMDAFEVSLSRDATEAEVFSGG-GSRQQAKG--GGTGTAAATAVVDVTPEPGALGTPSALYRPVVRGLGIPEQLMHGEGARGSLGCLCLCARKPLIAGIARRGVKQQAESSGRXXXXXXXXXXXXXXXXXAEVGGSDGGSEIGRGDEERPRYQRPGAVFSAAG-----VEVQVWNYRTKRPLVKHRFGEGSSGGGSDEVAGGAGEMNAPGGEADPNGXXXXXXXXXXNAVNPVAISLHPSGDFIAVAFRHYVNIFYIVGGGGGDAIGTGDGNNXXXXXXXXXXXXXXXXXXGHRSMTSSADASSVLLPHSGAALSIDAAELAPLAVLRSDQREFMTKGMFSAAGEQDPVINHDPISALHYSPGGHLLAVVTGKVVQILGVHSGAAGGRLGRVQTLSGHASLVSSFCWGADDRRCWTAADGYLFEWEVGAGMGALGNDGVRRGEFVSKRVIFEGIVSDPALDGGVAACCVAGNGGAFNPSANYXXXXXXXXXXXXXGXGG------------GXGVPGAAVRGADGGGTSSNHGRDESGHGGRRPSRGQSFDGNDQTDAASPFFVAPVSVPIPXXXXXXXXXXXXXXXXXXGPAGRVYRGRATAGGSSTPAE----GVSIKGGRVRGTXXXXXXXXXXXXR--DTSFVFVWPGKLEATT-EAGLQARVPYRLTCVRVTAFESRFRGARNALLAGTKEGLVLAFDWGCLLRDSASGGKNEGQLGWEGEVLAPSAQVCLHSRPITSLALTADGKHFFTASSDGAVFMCKIQV 3837
A C PPIEVVHAFGSCPD+VRDN+C L ++RV Y VGSRVAVT G GGSG+ L FLSTGLRV+RV+AVACS D+RFVA C+KAV ++P+ AYATVYHMP++PR SRVKTLSYERPRR S S + +S GTG + R++P + TAEF TA FSHD +ILALLDG P WTLLWFEWKTGK+M T++L SPVHRV SP D SKT TAGA+GLFRIW T GGKV+ M PI GLR +VCYRDV WLN DRLVLAAHEG V L+SP++VLQEWD+ L G +SF G +++ + TD +G HGG LNVVA H GF VGG G+VLVFE++ + GGA+ R+ Y L RVVR+F V LVEL+P+ +YRWLLAG DGEIGLLD+ E+FS +PDGDS TSS P P+ RG GG+ + A LET XXX GGE + RGFAKAMDAFE SL R A +AE+ S G GSRQQ G +A + + E G + YRPV R LG+ L GEG XXXXXXXXXXXXXXXXX ++AG E+Q+WNYRTKR L G GG D+V G + GG + A PV+ISLHPSGD IAVAF H VN+FYIVG GG +AIG D G +S + S+ L G A ++ A E+APLA LRSDQRE +TKGMFS GEQ+P+IN +P+SA+HYSPGGHL+AVVTGKVVQ+LGVHSG AGGRLGRVQTLSGHAS VS+FCWGAD+RRCWTAADGY+FEWEVG+G+GALG D VRRGEFVSKRV FEGIV+DP LDGG+ AC G G G G+P AA + S H G P R S +GND A + P P+ AT GGS+ P G S R G+ R +S FVWP KLE + E GL E+R+RGA N LLAGTK GL LAFDWGCLLRDSA+G + +G L +G VL PSAQVCLHS PITSLALTADGKHFFTA+ DGAVFMCK+Q+
Sbjct: 13 ASCAPPIEVVHAFGSCPDKVRDNICALDEERVVYVVGSRVAVTAPANGSANDGGSGSSRLEFLSTGLRVARVTAVACSPDRRFVAACYKAVVEEDPNQTAAYATVYHMPSRPRASRVKTLSYERPRRQQQQGHLRSGGRSRSSNSSRSSSRHDSYCSTASSGGTG--DKGCGRFSPPPTVLPSA-----TAEFATATFSHDGQILALLDGSPAWTLLWFEWKTGKRMFTVQLDSPVHRVALSPFDNSKTVTAGADGLFRIWSTQQGGKVSCMVPIPGLRGDVCYRDVAWLNADRLVLAAHEGTVTLVSPNEVLQEWDLSRSDGL-GASSFPPDGDGAG-DSAGSVGTDDTLSAGVHGGSLNVVATHRRGFFVGGSRGQVLVFEQETRAGGASGGRETYALARVVRIFGVSLVELRPTMEPDYRWLLAGGEDGEIGLLDTDEIFS-----AVPDGDSLTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTP------VPRLCRG--GGHAPATAXXGVA-----------LETXXXXTDG----GGEAVSRGFAKAMDAFEDSL-RAAADAELASTGTGSRQQGGNHRGSASLSAGPSSASASRETGGKVKANTQYRPVARALGVRGML--GEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAGGIDGSSEIQIWNYRTKRLLAGELLGSVVVAGGDDQVGG---DGTDAGGVRE------------EGATCPVSISLHPSGDSIAVAFPHCVNVFYIVGSGG-EAIGDQDN-------------ACGGGGGGVTDPVTSKEPLSMSLQQLGVAEAVAAVEMAPLATLRSDQREILTKGMFSVPGEQEPIINCEPVSAVHYSPGGHLIAVVTGKVVQVLGVHSGTAGGRLGRVQTLSGHASDVSAFCWGADNRRCWTAADGYIFEWEVGSGLGALGTDKVRRGEFVSKRVAFEGIVADPTLDGGLVACXXXXXXXXXXXXXXKNRADADGGRKLSRGTMGKLDGGARGKSQRGSGLPSAAPA-----------AENCSPHLGNAPKRTNS-NGNDGNATAE------LQAPGVGGSNTNTGGERRSKRRHLEPSSTC----ATTGGSTAPVSLLPRGSSAAAARRGGSRVATADAARLGDRCQSSSSFFVWPPKLEPISGEPGL----------------ETRYRGAHNVLLAGTKGGLALAFDWGCLLRDSAAGDEEKGDLREKGGVLVPSAQVCLHSLPITSLALTADGKHFFTAAEDGAVFMCKVQL 1231
BLAST of mRNA_M-pyrifera_M_contig10089.194.1 vs. uniprot
Match: A0A7S4ULA6_GUITH (Hypothetical protein (Fragment) n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4ULA6_GUITH) HSP 1 Score: 70.9 bits (172), Expect = 1.110e-8 Identity = 49/204 (24.02%), Postives = 90/204 (44.12%), Query Frame = 1
Query: 523 FVTANFSHDDRILALLDGGPEWTLLWFEWKTGKKMCTLELGSPVHRVVSSPLDQSKTATAGANGLFRIWRTHAGGKVAPMAPIAGLRENVCYRDVTWLNGDRLVLAAHEGIVVLISPSDVLQEWDVYAGGKLDGPTSFRSRDPNPGQENSTFLETDGNFYSGHGGGLNVVAAHGMGFLVGGDSGRVLVFEEDRKEGGAAARDAY 1134
FV+ FS+D + L + GGPE+T++++ W K + + + S V RV SPLD + A++G GL ++WR + ++G + + D W GDRL+ + G V+++ ++ +L G +N ++ + GF++GG GR+ V+E++ +D Y
Sbjct: 112 FVSLCFSNDSKFLVTVGGGPEFTMIYWNWFHAKVVASCRINSEVRRVSFSPLDNVQIASSGP-GLLKLWRLQE-STLKGFNMLSGKIASSNFTDHAWAPGDRLLASTDNGDVLVVEQGELR----CIVKTRLSGSP------------------------------INSLSVYSSGFIIGGTEGRMSVYEKNDAREKGEDKDPY 279
BLAST of mRNA_M-pyrifera_M_contig10089.194.1 vs. uniprot
Match: A0A7S4PQP4_GUITH (Hypothetical protein (Fragment) n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PQP4_GUITH) HSP 1 Score: 70.9 bits (172), Expect = 1.760e-8 Identity = 49/204 (24.02%), Postives = 90/204 (44.12%), Query Frame = 1
Query: 523 FVTANFSHDDRILALLDGGPEWTLLWFEWKTGKKMCTLELGSPVHRVVSSPLDQSKTATAGANGLFRIWRTHAGGKVAPMAPIAGLRENVCYRDVTWLNGDRLVLAAHEGIVVLISPSDVLQEWDVYAGGKLDGPTSFRSRDPNPGQENSTFLETDGNFYSGHGGGLNVVAAHGMGFLVGGDSGRVLVFEEDRKEGGAAARDAY 1134
FV+ FS+D + L + GGPE+T++++ W K + + + S V RV SPLD + A++G GL ++WR + ++G + + D W GDRL+ + G V+++ ++ +L G +N ++ + GF++GG GR+ V+E++ +D Y
Sbjct: 112 FVSLCFSNDSKFLVTVGGGPEFTMIYWNWFHAKVVASCRINSEVRRVSFSPLDNVQIASSGP-GLLKLWRLQE-STLKGFNMLSGKIASSNFTDHAWAPGDRLLASTDNGDVLVVEQGELR----CIVKTRLSGSP------------------------------INSLSVYSSGFIIGGTEGRMSVYEKNDAREKGEDKDPY 279
BLAST of mRNA_M-pyrifera_M_contig10089.194.1 vs. uniprot
Match: A0A7S0WTJ3_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WTJ3_9CHLO) HSP 1 Score: 65.9 bits (159), Expect = 3.630e-7 Identity = 56/198 (28.28%), Postives = 90/198 (45.45%), Query Frame = 1
Query: 520 EFVTANFSHDDRILALLDGGPEWTLLWFEWKTGKKMC----TLELGSPVHRVVSSPLDQSKTATAGANGLFRIWRTHAGGKVAPMAPIAGLRENVCYRDVTWL--NGDRLVLAAHEGIVVLISPSDVLQEWDVYAGGKLDGPTSFRSRDPNPGQENSTFLETDGNFYSGHGGGLNVVAAHGMGFLVGGDSGRVLVFEE 1095
E+V+ FS D + LA G PEW LL + W+ K T + G P+++ +P D S G N +F+ +R A + P+AP+ G RE Y WL +R+V+ +G ++L+ GG+L G +PG+ G + V+ + GF+VGGD GR+ ++E+
Sbjct: 62 EYVSMAFSPDGKTLAAQAGAPEWNLLLWIWEKAKVASMVKSTNQQGMPLYQCAFNPHDGSLLTVCG-NQIFKSFRA-AESNLKPLAPLLGKREPQNYTTHLWLPDEKERVVVGTDQGELLLVE------------GGELKGSLV------SPGE----------------GIAIEVILPYSKGFIVGGDHGRLSLYEK 223
BLAST of mRNA_M-pyrifera_M_contig10089.194.1 vs. uniprot
Match: A0A7S0WUJ4_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WUJ4_9CHLO) HSP 1 Score: 65.9 bits (159), Expect = 5.780e-7 Identity = 56/198 (28.28%), Postives = 90/198 (45.45%), Query Frame = 1
Query: 520 EFVTANFSHDDRILALLDGGPEWTLLWFEWKTGKKMC----TLELGSPVHRVVSSPLDQSKTATAGANGLFRIWRTHAGGKVAPMAPIAGLRENVCYRDVTWL--NGDRLVLAAHEGIVVLISPSDVLQEWDVYAGGKLDGPTSFRSRDPNPGQENSTFLETDGNFYSGHGGGLNVVAAHGMGFLVGGDSGRVLVFEE 1095
E+V+ FS D + LA G PEW LL + W+ K T + G P+++ +P D S G N +F+ +R A + P+AP+ G RE Y WL +R+V+ +G ++L+ GG+L G +PG+ G + V+ + GF+VGGD GR+ ++E+
Sbjct: 62 EYVSMAFSPDGKTLAAQAGAPEWNLLLWIWEKAKVASMVKSTNQQGMPLYQCAFNPHDGSLLTVCG-NQIFKSFRA-AESNLKPLAPLLGKREPQNYTTHLWLPDEKERVVVGTDQGELLLVE------------GGELKGSLV------SPGE----------------GIAIEVILPYSKGFIVGGDHGRLSLYEK 223 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10089.194.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig10089.194.1 >prot_M-pyrifera_M_contig10089.194.1 ID=prot_M-pyrifera_M_contig10089.194.1|Name=mRNA_M-pyrifera_M_contig10089.194.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=1281bp AGCPPPIEVVHAFGSCPDRVRDNMCLLGDQRVAYAVGSRVAVTDVEGGGVback to top mRNA from alignment at M-pyrifera_M_contig10089:1745..10040- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig10089.194.1 ID=mRNA_M-pyrifera_M_contig10089.194.1|Name=mRNA_M-pyrifera_M_contig10089.194.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=8296bp|location=Sequence derived from alignment at M-pyrifera_M_contig10089:1745..10040- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig10089:1745..10040- >mRNA_M-pyrifera_M_contig10089.194.1 ID=mRNA_M-pyrifera_M_contig10089.194.1|Name=mRNA_M-pyrifera_M_contig10089.194.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=7686bp|location=Sequence derived from alignment at M-pyrifera_M_contig10089:1745..10040- (Macrocystis pyrifera P11B4 male)back to top |