mRNA_M-pyrifera_M_contig100856.190.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig100856.190.1
Unique NamemRNA_M-pyrifera_M_contig100856.190.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig100856.190.1 vs. uniprot
Match: A0A7V3DI38_9BACT (Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7V3DI38_9BACT)

HSP 1 Score: 357 bits (916), Expect = 3.170e-120
Identity = 170/225 (75.56%), Postives = 194/225 (86.22%), Query Frame = 1
Query:    1 GNEYVDYVLSWGPLILGHAHPDVVHAIHNAASKGASFGIPTENEIRLAEKIIAHFPTMDKVRLVNSGTEASMSAIRLARGYTGRDLVVKIEGCYHGHVDGLLVKAGSGLLTLGTPTSPGIPESYAQCTLTVPFNNLEAAREVFEARGEDIACVIIEPVAGNMGLIPPAPGYLQGLRALTKDSGALLVFDEVMTGFRVAIGGAQMRYGIRPDLTILGKVIGGGLPV 675
            GNEY+DYVLSWGPL+LGHAHP VV A+  A  KG+SFGIPTE EIRLAE+I    P+++KVRLVNSGTEA+MSAIRLARG+TGRDL+VK+EGCYHGH DGLLVKAGSGL TLG P SPGIP +YAQCTLT PFN+LEA + +F+A GE+IACVI+EPVAGN G+I P PGYLQGLR +TK  G+LL+FDEVM GFR A+GGAQ RYGI PDLT LGKVIGGGLPV
Sbjct:   51 GNEYIDYVLSWGPLVLGHAHPVVVEAVRKALEKGSSFGIPTEAEIRLAERIRRLMPSIEKVRLVNSGTEATMSAIRLARGFTGRDLIVKLEGCYHGHADGLLVKAGSGLATLGIPASPGIPAAYAQCTLTAPFNDLEAMQAIFDAHGENIACVILEPVAGNAGVILPEPGYLQGLRDITKRHGSLLIFDEVMCGFRAALGGAQARYGITPDLTTLGKVIGGGLPV 275          
BLAST of mRNA_M-pyrifera_M_contig100856.190.1 vs. uniprot
Match: A0A831U8D7_9BACT (Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A831U8D7_9BACT)

HSP 1 Score: 355 bits (910), Expect = 2.660e-119
Identity = 173/225 (76.89%), Postives = 191/225 (84.89%), Query Frame = 1
Query:    1 GNEYVDYVLSWGPLILGHAHPDVVHAIHNAASKGASFGIPTENEIRLAEKIIAHFPTMDKVRLVNSGTEASMSAIRLARGYTGRDLVVKIEGCYHGHVDGLLVKAGSGLLTLGTPTSPGIPESYAQCTLTVPFNNLEAAREVFEARGEDIACVIIEPVAGNMGLIPPAPGYLQGLRALTKDSGALLVFDEVMTGFRVAIGGAQMRYGIRPDLTILGKVIGGGLPV 675
            GNE +DYVLSWGPL+LGHAHP VV A+  A  +GASFGIPTE E  LAE+IIA +P+MDK+RLVNSGTEA+MSAIRLARGYTGRDLVVK EGCYHGHVD LLVKAGSGL TLG P SPGIP + AQ TLT PFN+++ AR +FE  GE IACVI+EPV GN G+IPPAPGYL+ LRALT   GALLVFDEVMTGFRVAIGGAQ RYG+ PDLT LGKVIGGGLPV
Sbjct:   51 GNEIIDYVLSWGPLVLGHAHPHVVEAVTRAMERGASFGIPTEAETLLAERIIARYPSMDKLRLVNSGTEATMSAIRLARGYTGRDLVVKFEGCYHGHVDSLLVKAGSGLATLGVPGSPGIPAACAQGTLTAPFNSIDGARVLFETHGEHIACVIVEPVVGNAGVIPPAPGYLEELRALTTHHGALLVFDEVMTGFRVAIGGAQERYGVTPDLTTLGKVIGGGLPV 275          
BLAST of mRNA_M-pyrifera_M_contig100856.190.1 vs. uniprot
Match: A0A7Y5CA29_9BACT (Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7Y5CA29_9BACT)

HSP 1 Score: 353 bits (905), Expect = 1.480e-118
Identity = 167/225 (74.22%), Postives = 194/225 (86.22%), Query Frame = 1
Query:    1 GNEYVDYVLSWGPLILGHAHPDVVHAIHNAASKGASFGIPTENEIRLAEKIIAHFPTMDKVRLVNSGTEASMSAIRLARGYTGRDLVVKIEGCYHGHVDGLLVKAGSGLLTLGTPTSPGIPESYAQCTLTVPFNNLEAAREVFEARGEDIACVIIEPVAGNMGLIPPAPGYLQGLRALTKDSGALLVFDEVMTGFRVAIGGAQMRYGIRPDLTILGKVIGGGLPV 675
            GNE +DYVLSWGPLILGHAHP +V A+  A  KG+SFGIPTE EIRLAE+I+   P+++KVRLVNSGTEA+MSAIRLARGYTGRDL+VKIEGCYHGH DGLLVKAGSGL TLG PTSPG+P  YA CTLT+PFN+L+AAR +FEA GE+IA +I+EPVAGNMG++ P  GYL+ LR LT   G+LL+FDEVMTGFRVA+GGAQ  YG+ PDLT+LGKVIGGGLPV
Sbjct:   51 GNELIDYVLSWGPLILGHAHPRIVEAVRKALEKGSSFGIPTEAEIRLAERIVEIVPSIEKVRLVNSGTEATMSAIRLARGYTGRDLIVKIEGCYHGHADGLLVKAGSGLTTLGVPTSPGVPAPYASCTLTMPFNDLDAARALFEAHGENIAAIILEPVAGNMGVVLPEDGYLRALRDLTAAYGSLLIFDEVMTGFRVAMGGAQAHYGVMPDLTVLGKVIGGGLPV 275          
BLAST of mRNA_M-pyrifera_M_contig100856.190.1 vs. uniprot
Match: A0A7Z9HUS6_9BACT (Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7Z9HUS6_9BACT)

HSP 1 Score: 333 bits (853), Expect = 4.340e-110
Identity = 156/225 (69.33%), Postives = 187/225 (83.11%), Query Frame = 1
Query:    1 GNEYVDYVLSWGPLILGHAHPDVVHAIHNAASKGASFGIPTENEIRLAEKIIAHFPTMDKVRLVNSGTEASMSAIRLARGYTGRDLVVKIEGCYHGHVDGLLVKAGSGLLTLGTPTSPGIPESYAQCTLTVPFNNLEAAREVFEARGEDIACVIIEPVAGNMGLIPPAPGYLQGLRALTKDSGALLVFDEVMTGFRVAIGGAQMRYGIRPDLTILGKVIGGGLPV 675
            GNEY+DYVLSWGPL+LGHA+P VV A+  A  KGASFGIPTE EI L  +I +H   ++K+RLVNSGTEA+MSAIRLARG T RDLVVKIEGCYHGHVD LLV  GSG  T GTPTSPGIP S+ + TLT+P+N+L+AARE FE+RGE+IAC+I+EPV GNMG++ P  GYL GLR +TK+  A+L+FDEVM+GFR+A+GGA+ RYG+ PDL  LGKVIGGGLPV
Sbjct:   95 GNEYIDYVLSWGPLVLGHAYPPVVEAVTKALEKGASFGIPTEAEITLGNQIASHVKCIEKIRLVNSGTEATMSAIRLARGVTKRDLVVKIEGCYHGHVDSLLVNVGSGPTTFGTPTSPGIPASFVESTLTIPYNDLDAAREAFESRGEEIACMILEPVPGNMGVLVPEDGYLAGLREITKEHSAMLIFDEVMSGFRIAMGGAEERYGVTPDLITLGKVIGGGLPV 319          
BLAST of mRNA_M-pyrifera_M_contig100856.190.1 vs. uniprot
Match: UPI001E2C9558 (glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Phosphitispora fastidiosa TaxID=2837202 RepID=UPI001E2C9558)

HSP 1 Score: 329 bits (844), Expect = 2.820e-109
Identity = 154/225 (68.44%), Postives = 183/225 (81.33%), Query Frame = 1
Query:    1 GNEYVDYVLSWGPLILGHAHPDVVHAIHNAASKGASFGIPTENEIRLAEKIIAHFPTMDKVRLVNSGTEASMSAIRLARGYTGRDLVVKIEGCYHGHVDGLLVKAGSGLLTLGTPTSPGIPESYAQCTLTVPFNNLEAAREVFEARGEDIACVIIEPVAGNMGLIPPAPGYLQGLRALTKDSGALLVFDEVMTGFRVAIGGAQMRYGIRPDLTILGKVIGGGLPV 675
            GNEY+DYV SWGP+ILGH HP+VV A+     KG S+G PTE E  +A+ IIA FP MD VR+VNSGTEA+MSA+R ARGYTGR+ +VK EGCYHGH D LL+KAGSG LTLG PTSPG+PE+ A  T+T  FNNL+  +++FE  GEDIA VI+EPVAGNMG++PP PG+L+GLR +T   GALL+FDEVMTGFRVA GGAQ+R+GI PDLT LGKVIGGGLPV
Sbjct:   53 GNEYIDYVGSWGPMILGHQHPEVVAALKAYLDKGTSYGAPTELETEMAKTIIAAFPAMDMVRMVNSGTEATMSALRAARGYTGRNKIVKFEGCYHGHADSLLIKAGSGALTLGVPTSPGVPENIAVNTITAQFNNLDTVKKIFEIEGEDIAAVIVEPVAGNMGVVPPQPGFLEGLREITGKYGALLIFDEVMTGFRVAYGGAQLRFGIEPDLTCLGKVIGGGLPV 277          
BLAST of mRNA_M-pyrifera_M_contig100856.190.1 vs. uniprot
Match: A0A5Q0BNP8_9GAMM (Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Candidatus Methylospira mobilis TaxID=1808979 RepID=A0A5Q0BNP8_9GAMM)

HSP 1 Score: 329 bits (843), Expect = 3.520e-109
Identity = 152/225 (67.56%), Postives = 185/225 (82.22%), Query Frame = 1
Query:    1 GNEYVDYVLSWGPLILGHAHPDVVHAIHNAASKGASFGIPTENEIRLAEKIIAHFPTMDKVRLVNSGTEASMSAIRLARGYTGRDLVVKIEGCYHGHVDGLLVKAGSGLLTLGTPTSPGIPESYAQCTLTVPFNNLEAAREVFEARGEDIACVIIEPVAGNMGLIPPAPGYLQGLRALTKDSGALLVFDEVMTGFRVAIGGAQMRYGIRPDLTILGKVIGGGLPV 675
            G  Y+DYV SWGP++LGHAHP+V+ A+H A  +G SFG PTE E  +A K+    P+MDKVR+V+SGTEA+MSAIRLARG+TGRD +VK EGCYHGH D LLVKAGSG LTLG P+SPG+P + A+ TLT+ +N+ +A REVF  RG+DIACVI+EPVAGNM  +PPAPG+L+GLRAL  + GALL+FDEVMTGFRVA+GGAQ  YG+ PDLT LGKVIGGG+PV
Sbjct:   47 GKRYIDYVGSWGPMVLGHAHPEVLAAVHAAVDRGLSFGAPTEVETEMARKVCELVPSMDKVRMVSSGTEATMSAIRLARGFTGRDKIVKFEGCYHGHSDSLLVKAGSGALTLGVPSSPGVPAALAELTLTLSYNDSDAVREVFARRGQDIACVIVEPVAGNMNCVPPAPGFLEGLRALCSEYGALLIFDEVMTGFRVALGGAQALYGVAPDLTTLGKVIGGGMPV 271          
BLAST of mRNA_M-pyrifera_M_contig100856.190.1 vs. uniprot
Match: A0A1V6EQS9_9BACT (Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Candidatus Hydrogenedentes bacterium ADurb.Bin101 TaxID=1852847 RepID=A0A1V6EQS9_9BACT)

HSP 1 Score: 325 bits (834), Expect = 8.640e-108
Identity = 152/225 (67.56%), Postives = 182/225 (80.89%), Query Frame = 1
Query:    1 GNEYVDYVLSWGPLILGHAHPDVVHAIHNAASKGASFGIPTENEIRLAEKIIAHFPTMDKVRLVNSGTEASMSAIRLARGYTGRDLVVKIEGCYHGHVDGLLVKAGSGLLTLGTPTSPGIPESYAQCTLTVPFNNLEAAREVFEARGEDIACVIIEPVAGNMGLIPPAPGYLQGLRALTKDSGALLVFDEVMTGFRVAIGGAQMRYGIRPDLTILGKVIGGGLPV 675
            GN  +DYVLSWGPL  GHAHP+VV A+ +AA++G  FGIPTE E  LA KII HFP M++VR VNSGTEA MSAIRLARGYT R++++K++GCYHGH D LLV+AGSG+ TLG P SPG+P   +  T+ VP+N L++  E F+  GE+IACVI+EPVAGNMG++PP PGYL+GL ALT   GALL+FDEVMTGFRVA GGAQ RYGI PDLT LGKVIGGG+PV
Sbjct:   51 GNTLIDYVLSWGPLAAGHAHPEVVEAVRDAAARGFGFGIPTEQETLLARKIIRHFPLMERVRFVNSGTEAVMSAIRLARGYTRREIIIKMDGCYHGHADSLLVRAGSGVATLGLPDSPGVPRDASARTVVVPYNCLDSVAEAFDHFGEEIACVIVEPVAGNMGVVPPEPGYLEGLHALTHSHGALLIFDEVMTGFRVAPGGAQERYGIAPDLTTLGKVIGGGMPV 275          
BLAST of mRNA_M-pyrifera_M_contig100856.190.1 vs. uniprot
Match: A0A3A4NS52_9BACT (Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Candidatus Abyssubacteria bacterium SURF_5 TaxID=2093360 RepID=A0A3A4NS52_9BACT)

HSP 1 Score: 324 bits (831), Expect = 2.310e-107
Identity = 149/225 (66.22%), Postives = 182/225 (80.89%), Query Frame = 1
Query:    1 GNEYVDYVLSWGPLILGHAHPDVVHAIHNAASKGASFGIPTENEIRLAEKIIAHFPTMDKVRLVNSGTEASMSAIRLARGYTGRDLVVKIEGCYHGHVDGLLVKAGSGLLTLGTPTSPGIPESYAQCTLTVPFNNLEAAREVFEARGEDIACVIIEPVAGNMGLIPPAPGYLQGLRALTKDSGALLVFDEVMTGFRVAIGGAQMRYGIRPDLTILGKVIGGGLPV 675
            GNEY+DYV SWGPLILGHAH +VV  +   A++G SFGIPTE E RLA+ I+  FP++++VRLVNSGTEA MSAIRLAR +T R L+VK EGCYHGH DGLLVKAGSG +TLG PTSPG+P  YA CT+T+P+N+LEAA   F   G +IAC+I+EP+AGNMG++PP  GYL+GLR LT   G LL+FDE++TGFRVA GGAQ  + ++PDLT LGK+IGGGLPV
Sbjct:   49 GNEYIDYVCSWGPLILGHAHKEVVARLRKTAAEGTSFGIPTEKESRLAKMIMRAFPSIERVRLVNSGTEAVMSAIRLARAWTDRPLIVKFEGCYHGHADGLLVKAGSGAMTLGVPTSPGVPPQYAGCTITLPYNDLEAAAAAFREHGSEIACLIVEPIAGNMGVVPPEEGYLEGLRELTAKHGVLLIFDEIITGFRVAYGGAQKLFKVKPDLTTLGKIIGGGLPV 273          
BLAST of mRNA_M-pyrifera_M_contig100856.190.1 vs. uniprot
Match: A0A2E6MEB5_9GAMM (Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E6MEB5_9GAMM)

HSP 1 Score: 324 bits (831), Expect = 2.540e-107
Identity = 150/225 (66.67%), Postives = 179/225 (79.56%), Query Frame = 1
Query:    1 GNEYVDYVLSWGPLILGHAHPDVVHAIHNAASKGASFGIPTENEIRLAEKIIAHFPTMDKVRLVNSGTEASMSAIRLARGYTGRDLVVKIEGCYHGHVDGLLVKAGSGLLTLGTPTSPGIPESYAQCTLTVPFNNLEAAREVFEARGEDIACVIIEPVAGNMGLIPPAPGYLQGLRALTKDSGALLVFDEVMTGFRVAIGGAQMRYGIRPDLTILGKVIGGGLPV 675
            GN YVDY+ SWGP+ILGH H   + A+   AS+   FG PTE EI LAE I+   P+M +VR+VNSGTEA+MSAIRLARGYTGRDL++K  GCYHGH D LLVKAGSG+LTLG P SPG+P   A CTL++PFN+L+A  +VFE   E IAC+I+EP+AGNMG IPP PGYLQGLR LT+  GALL+FDEVMTGFRV+ GGAQ+ YG+ PDLT LGK++GGGLPV
Sbjct:   51 GNRYVDYIGSWGPMILGHNHAPTIAAVQKQASRALGFGAPTEAEIELAEAIVQRIPSMQQVRMVNSGTEATMSAIRLARGYTGRDLILKFTGCYHGHSDSLLVKAGSGVLTLGLPNSPGVPADLAACTLSIPFNDLDAVSQVFEQYKEKIACIIVEPIAGNMGCIPPRPGYLQGLRDLTEKDGALLIFDEVMTGFRVSRGGAQVLYGVEPDLTTLGKIVGGGLPV 275          
BLAST of mRNA_M-pyrifera_M_contig100856.190.1 vs. uniprot
Match: A0A8J6YSJ7_9BACL (Glutamate-1-semialdehyde 2,1-aminomutase (Fragment) n=2 Tax=Thermicanus TaxID=94008 RepID=A0A8J6YSJ7_9BACL)

HSP 1 Score: 320 bits (820), Expect = 8.870e-107
Identity = 148/225 (65.78%), Postives = 183/225 (81.33%), Query Frame = 1
Query:    1 GNEYVDYVLSWGPLILGHAHPDVVHAIHNAASKGASFGIPTENEIRLAEKIIAHFPTMDKVRLVNSGTEASMSAIRLARGYTGRDLVVKIEGCYHGHVDGLLVKAGSGLLTLGTPTSPGIPESYAQCTLTVPFNNLEAAREVFEARGEDIACVIIEPVAGNMGLIPPAPGYLQGLRALTKDSGALLVFDEVMTGFRVAIGGAQMRYGIRPDLTILGKVIGGGLPV 675
            GNEY+DYVLS+GPLILGHAHP V+ A+   A KG SFG PT  EI LA K++   P+++ VR+VNSGTEA+MSA+RLARGYTGRDL++K  GCYHGH D LL+KAGSG+ TLG P SPG+P   A+ T+TVP+N+LEA +  F+  GE++A VI+EPVAGNMG++PP PG+L+GLR +T+  G LL+FDEVMTGFRV++GGAQ  YGI PDLT LGKVIGGGLPV
Sbjct:   53 GNEYIDYVLSYGPLILGHAHPKVIEALSRTAEKGTSFGAPTLLEIELARKVMKLIPSIEMVRMVNSGTEATMSALRLARGYTGRDLIMKFIGCYHGHADSLLIKAGSGVATLGLPDSPGVPAKTAEHTITVPYNDLEAVKLAFQKHGEELAAVILEPVAGNMGVVPPKPGFLEGLREITRQYGTLLIFDEVMTGFRVSLGGAQGHYGITPDLTTLGKVIGGGLPV 277          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100856.190.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7V3DI38_9BACT3.170e-12075.56Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=C... [more]
A0A831U8D7_9BACT2.660e-11976.89Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=C... [more]
A0A7Y5CA29_9BACT1.480e-11874.22Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=C... [more]
A0A7Z9HUS6_9BACT4.340e-11069.33Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=C... [more]
UPI001E2C95582.820e-10968.44glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=P... [more]
A0A5Q0BNP8_9GAMM3.520e-10967.56Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=C... [more]
A0A1V6EQS9_9BACT8.640e-10867.56Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=C... [more]
A0A3A4NS52_9BACT2.310e-10766.22Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=C... [more]
A0A2E6MEB5_9GAMM2.540e-10766.67Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=G... [more]
A0A8J6YSJ7_9BACL8.870e-10765.78Glutamate-1-semialdehyde 2,1-aminomutase (Fragment... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig100856contigM-pyrifera_M_contig100856:2..676 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score323.6
Seed ortholog evalue7.5e-86
Seed eggNOG ortholog1089548.KI783301_gene1899
Preferred namehemL
KEGG rclassRC00677
KEGG koko:K01845
KEGG ReactionR02272
KEGG Pathwayko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120
KEGG ModuleM00121
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016020,GO:0016853,GO:0016866,GO:0016869,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0040007,GO:0042168,GO:0042286,GO:0042440,GO:0042802,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.intramolecular transferase activity, transferring amino groups
EggNOG OGs1TPNH@1239,3WFAP@539002,4HANQ@91061,COG0001@1,COG0001@2
EC5.4.3.8
COG Functional cat.H
BiGG ReactioniSB619.SA_RS08395,iUMNK88_1353.UMNK88_158
Best tax levelBacillales incertae sedis
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007
Exons1
Model size675
Cds size675
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815505.9657583-CDS-M-pyrifera_M_contig100856:1..6761622815505.9657583-CDS-M-pyrifera_M_contig100856:1..676Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100856 2..676 +
1692277441.9249425-CDS-M-pyrifera_M_contig100856:1..6761692277441.9249425-CDS-M-pyrifera_M_contig100856:1..676Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100856 2..676 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig100856.190.1prot_M-pyrifera_M_contig100856.190.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig100856 2..676 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig100856.190.1

>prot_M-pyrifera_M_contig100856.190.1 ID=prot_M-pyrifera_M_contig100856.190.1|Name=mRNA_M-pyrifera_M_contig100856.190.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=225bp
GNEYVDYVLSWGPLILGHAHPDVVHAIHNAASKGASFGIPTENEIRLAEK
IIAHFPTMDKVRLVNSGTEASMSAIRLARGYTGRDLVVKIEGCYHGHVDG
LLVKAGSGLLTLGTPTSPGIPESYAQCTLTVPFNNLEAAREVFEARGEDI
ACVIIEPVAGNMGLIPPAPGYLQGLRALTKDSGALLVFDEVMTGFRVAIG
GAQMRYGIRPDLTILGKVIGGGLPV
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mRNA from alignment at M-pyrifera_M_contig100856:2..676+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig100856.190.1 ID=mRNA_M-pyrifera_M_contig100856.190.1|Name=mRNA_M-pyrifera_M_contig100856.190.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=675bp|location=Sequence derived from alignment at M-pyrifera_M_contig100856:2..676+ (Macrocystis pyrifera P11B4 male)
GGCAATGAATATGTCGACTACGTCTTGTCGTGGGGACCGCTGATCCTTGG GCATGCCCATCCGGACGTTGTTCACGCGATTCATAACGCGGCTTCCAAGG GGGCGAGTTTCGGGATTCCTACGGAAAACGAAATTCGGCTCGCAGAGAAA ATCATCGCGCACTTTCCCACGATGGATAAGGTCCGGCTGGTGAACAGTGG GACCGAGGCGAGCATGAGCGCGATTCGACTCGCGCGTGGGTATACCGGTC GTGATCTTGTCGTCAAAATCGAGGGCTGCTATCACGGCCATGTCGACGGG TTGTTGGTCAAAGCCGGTAGCGGTTTGCTCACGCTCGGTACGCCGACCAG TCCGGGCATTCCTGAATCCTATGCGCAGTGCACGTTGACTGTTCCGTTCA ACAATCTTGAAGCGGCGCGGGAAGTATTCGAGGCGCGGGGAGAGGACATC GCGTGCGTCATTATTGAACCGGTGGCGGGGAACATGGGCCTTATACCGCC AGCGCCTGGCTACTTGCAGGGTTTGCGCGCGCTTACGAAAGATTCCGGTG CGCTCCTCGTCTTCGATGAAGTGATGACCGGATTTCGTGTCGCGATTGGT GGCGCGCAGATGCGGTATGGAATTCGACCGGACCTTACGATTCTGGGCAA GGTTATCGGTGGCGGACTTCCCGTT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig100856:2..676+

>mRNA_M-pyrifera_M_contig100856.190.1 ID=mRNA_M-pyrifera_M_contig100856.190.1|Name=mRNA_M-pyrifera_M_contig100856.190.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1350bp|location=Sequence derived from alignment at M-pyrifera_M_contig100856:2..676+ (Macrocystis pyrifera P11B4 male)
GGCAATGAATATGTCGACTACGTCTTGTCGTGGGGACCGCTGATCCTTGG
GCATGCCCATCCGGACGTTGTTCACGCGATTCATAACGCGGCTTCCAAGG
GGGCGAGTTTCGGGATTCCTACGGAAAACGAAATTCGGCTCGCAGAGAAA
ATCATCGCGCACTTTCCCACGATGGATAAGGTCCGGCTGGTGAACAGTGG
GACCGAGGCGAGCATGAGCGCGATTCGACTCGCGCGTGGGTATACCGGTC
GTGATCTTGTCGTCAAAATCGAGGGCTGCTATCACGGCCATGTCGACGGG
TTGTTGGTCAAAGCCGGTAGCGGTTTGCTCACGCTCGGTACGCCGACCAG
TCCGGGCATTCCTGAATCCTATGCGCAGTGCACGTTGACTGTTCCGTTCA
ACAATCTTGAAGCGGCGCGGGAAGTATTCGAGGCGCGGGGAGAGGACATC
GCGTGCGTCATTATTGAACCGGTGGCGGGGAACATGGGCCTTATACCGCC
AGCGCCTGGCTACTTGCAGGGTTTGCGCGCGCTTACGAAAGATTCCGGTG
CGCTCCTCGTCTTCGATGAAGTGATGACCGGATTTCGTGTCGCGATTGGT
GGCGCGCAGATGCGGTATGGAATTCGACCGGACCTTACGATTCTGGGCAA
GGTTATCGGTGGCGGACTTCCCGTTGGCAATGAATATGTCGACTACGTCT
TGTCGTGGGGACCGCTGATCCTTGGGCATGCCCATCCGGACGTTGTTCAC
GCGATTCATAACGCGGCTTCCAAGGGGGCGAGTTTCGGGATTCCTACGGA
AAACGAAATTCGGCTCGCAGAGAAAATCATCGCGCACTTTCCCACGATGG
ATAAGGTCCGGCTGGTGAACAGTGGGACCGAGGCGAGCATGAGCGCGATT
CGACTCGCGCGTGGGTATACCGGTCGTGATCTTGTCGTCAAAATCGAGGG
CTGCTATCACGGCCATGTCGACGGGTTGTTGGTCAAAGCCGGTAGCGGTT
TGCTCACGCTCGGTACGCCGACCAGTCCGGGCATTCCTGAATCCTATGCG
CAGTGCACGTTGACTGTTCCGTTCAACAATCTTGAAGCGGCGCGGGAAGT
ATTCGAGGCGCGGGGAGAGGACATCGCGTGCGTCATTATTGAACCGGTGG
CGGGGAACATGGGCCTTATACCGCCAGCGCCTGGCTACTTGCAGGGTTTG
CGCGCGCTTACGAAAGATTCCGGTGCGCTCCTCGTCTTCGATGAAGTGAT
GACCGGATTTCGTGTCGCGATTGGTGGCGCGCAGATGCGGTATGGAATTC
GACCGGACCTTACGATTCTGGGCAAGGTTATCGGTGGCGGACTTCCCGTT
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