mRNA_M-pyrifera_M_contig100854.189.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig100854.189.1 vs. uniprot
Match: A0A196SJI8_BLAHN (Ribosome biogenesis regulatory protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SJI8_BLAHN) HSP 1 Score: 121 bits (303), Expect = 2.880e-32 Identity = 66/143 (46.15%), Postives = 92/143 (64.34%), Query Frame = 1 Query: 19 VVSAKELVPEAFGVSEERVVGKVSASDALEYDLGHLMAYDPHPLDPGRFARRKEAHLQKRATENVQKLVGAIFSLPAESTEDGPVVTLPEPKLALPRHRKVPEEKAETRWERYARLKGITKKKRERMVWDEHAKEWRPRFGYK 447 V+ A+E++P+ F G+ D L+YDLG+L A D H ++ F KE +L +N Q L+ +F LP E+TE GPV TLP P +PR + +P+ K ET+WE +AR KGI K K+ERMV+D++AKEWRPR+GYK Sbjct: 4 VLKAEEILPDTFRKPGADTPGRF---DDLDYDLGNLEATDNHQVNLELFNENKEDYLLHVTRDNTQFLINRLFELPTENTEVGPVATLPAPVSKIPREKPIPK-KEETKWESFARSKGIKKHKKERMVYDKNAKEWRPRWGYK 142
BLAST of mRNA_M-pyrifera_M_contig100854.189.1 vs. uniprot
Match: W7U7Y9_9STRA (Ribosome biogenesis regulatory protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U7Y9_9STRA) HSP 1 Score: 122 bits (307), Expect = 9.930e-31 Identity = 69/143 (48.25%), Postives = 87/143 (60.84%), Query Frame = 1 Query: 19 VVSAKELVPEAFGVSEERVVGKVSASDALEYDLGHLMAYDPHPLDPGRFARRKEAHLQKRATENVQKLVGAIFSLPAESTEDGPVVTLPEPKLALPRHRKVPEEKAETRWERYARLKGITKKKRERMVWDEHAKEWRPRFGYK 447 VV A ++ P A+ + K D L YDL HL A D HP+D F E +L + AT VQ +V +F LP E + GPVVTLP LPR + +PE + TRWE++A+ KGITKKKR R VWDE A+EWRPR+GYK Sbjct: 8 VVKAVDVAPGAYNGANSAHKDK---PDDLLYDLHHLAAVDSHPVDLEGFQSDPEKYLWESATFGVQGIVNRLFELPYEQSNTGPVVTLPGATTYLPRAKPLPEARQATRWEKFAKEKGITKKKRSRTVWDEDAQEWRPRWGYK 147
BLAST of mRNA_M-pyrifera_M_contig100854.189.1 vs. uniprot
Match: A0A5A8C881_CAFRO (Ribosome biogenesis regulatory protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C881_CAFRO) HSP 1 Score: 122 bits (307), Expect = 1.150e-30 Identity = 67/149 (44.97%), Postives = 92/149 (61.74%), Query Frame = 1 Query: 19 VVSAKELVPEAFGVSEERVVGKVSA-----SDALEYDLGHLMAYDPHPLDPGRFAR-RKEAHLQKRATENVQKLVGAIFSLPAESTEDGPVVTLPEPKLALPRHRKVPEEKAETRWERYARLKGITKKKRERMVWDEHAKEWRPRFGYK 447 V+ A++L P AF + +++A +D L+YD +L A D HP+D + A +KE +L A E VQ L+ IF+LP E+TEDGP+ LP + +PR VPE + ET+WER+A+ KGI K KR RMV DE EW PR+GYK Sbjct: 21 VIRAEDLAPSAFAAGDAASAAELAALGVKRADDLDYDEANLTALDSHPVDAAKLASAKKEKYLAVVAREGVQLLIRRIFALPYEATEDGPMAVLPRARTHIPRRLPVPETRPETKWERFAKEKGIKKTKRSRMVLDEQTGEWAPRWGYK 169
BLAST of mRNA_M-pyrifera_M_contig100854.189.1 vs. uniprot
Match: A0A8B8CG92_CRAVI (Ribosome biogenesis regulatory protein n=2 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8CG92_CRAVI) HSP 1 Score: 120 bits (302), Expect = 3.020e-30 Identity = 54/115 (46.96%), Postives = 82/115 (71.30%), Query Frame = 1 Query: 103 LEYDLGHLMAYDPHPLDPGRFARRKEAHLQKRATENVQKLVGAIFSLPAESTEDGPVVTLPEPKLALPRHRKVPEEKAETRWERYARLKGITKKKRERMVWDEHAKEWRPRFGYK 447 LE D G+L+ +D +PLD + + KE +L+ A +N Q L+ ++ LP E ++ VV LP+PK +PR + VP+EKA T+W++YA+LKGI K+K+ RM WD+ +KEW+PR+GYK Sbjct: 30 LEIDPGNLLTFDTNPLDTTKLKQSKEEYLKSLARDNTQLLINTLWKLPTEKVDEAIVVKLPDPKTPIPREKPVPKEKALTKWQQYAQLKGINKRKKGRMTWDDQSKEWKPRWGYK 144
BLAST of mRNA_M-pyrifera_M_contig100854.189.1 vs. uniprot
Match: A0A2D4C1H3_PYTIN (Ribosome biogenesis regulatory protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C1H3_PYTIN) HSP 1 Score: 120 bits (301), Expect = 3.790e-30 Identity = 66/149 (44.30%), Postives = 92/149 (61.74%), Query Frame = 1 Query: 1 MSHSTEVVSAKELVPEAFGVSEERVVGKVSASDALEYDLGHLMAYDPHPLDPGRFARRKEAHLQKRATENVQKLVGAIFSLPAESTEDGPVVTLPEPKLALPRHRKVPEEKAETRWERYARLKGITKKKRERMVWDEHAKEWRPRFGYK 447 M+ +T VV A+E+ P A+ + V K D L YDLG+L A+D HP F + E L A ENVQ L+ IF LP E ++ GP+ LP P+L +PR + +P+ K ET+WE++A+ KGI K+K+ RMV+DE EW P +GYK Sbjct: 1 MAATTVVVKAQEIAPAAYAAANTSDVKK---EDDLTYDLGNLAAFDTHP-----FEYKNEKELALHARENVQLLINHIFDLPREMSDMGPMAQLPAPELTIPREKPLPKPKVETKWEKFAKDKGIQKRKKGRMVFDEATGEWAPAWGYK 141
BLAST of mRNA_M-pyrifera_M_contig100854.189.1 vs. uniprot
Match: K3X5D0_GLOUD (Ribosome biogenesis regulatory protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X5D0_GLOUD) HSP 1 Score: 120 bits (300), Expect = 5.420e-30 Identity = 62/142 (43.66%), Postives = 86/142 (60.56%), Query Frame = 1 Query: 22 VSAKELVPEAFGVSEERVVGKVSASDALEYDLGHLMAYDPHPLDPGRFARRKEAHLQKRATENVQKLVGAIFSLPAESTEDGPVVTLPEPKLALPRHRKVPEEKAETRWERYARLKGITKKKRERMVWDEHAKEWRPRFGYK 447 V A E+ P A+ + +V D L YDLG+L A+D HP F + E L A ENVQ L+ IF LP E ++ GP+ LPEP L +PR + +P+ K ET+WE++A+ KGI K+K+ RM +DE +EW P +GYK Sbjct: 3 VKASEIAPAAYATDK---TSEVKKEDDLTYDLGNLAAFDTHP-----FTYKNEKELALHARENVQLLINQIFDLPREMSDMGPLAKLPEPTLTIPREKPLPKPKVETKWEKFAKEKGIDKRKKSRMAFDEEKEEWAPSWGYK 136
BLAST of mRNA_M-pyrifera_M_contig100854.189.1 vs. uniprot
Match: A0A5D6YER7_9STRA (Ribosome biogenesis regulatory protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YER7_9STRA) HSP 1 Score: 119 bits (299), Expect = 6.680e-30 Identity = 65/143 (45.45%), Postives = 85/143 (59.44%), Query Frame = 1 Query: 19 VVSAKELVPEAFGVSEERVVGKVSASDALEYDLGHLMAYDPHPLDPGRFARRKEAHLQKRATENVQKLVGAIFSLPAESTEDGPVVTLPEPKLALPRHRKVPEEKAETRWERYARLKGITKKKRERMVWDEHAKEWRPRFGYK 447 VV A E+ P AF V K D L YDLG+L A+D HP FA E L + A ENVQ LV IF LP E ++ GP+ LP P L +PR + +P+ K +T+WE++AR KGI K+K+ RM +DE +W P +GYK Sbjct: 2 VVKAAEIAPAAFATDASSAVAK---EDDLSYDLGNLAAFDTHP-----FAYASEKALAQHARENVQLLVNRIFDLPREMSDMGPLAQLPAPALVIPREKPLPKPKVDTKWEKFAREKGIDKRKKSRMAFDEDKGDWAPAWGYK 136
BLAST of mRNA_M-pyrifera_M_contig100854.189.1 vs. uniprot
Match: A0A1V9ZCQ0_9STRA (Ribosome biogenesis regulatory protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZCQ0_9STRA) HSP 1 Score: 119 bits (298), Expect = 8.860e-30 Identity = 65/142 (45.77%), Postives = 86/142 (60.56%), Query Frame = 1 Query: 22 VSAKELVPEAFGVSEERVVGKVSASDALEYDLGHLMAYDPHPLDPGRFARRKEAHLQKRATENVQKLVGAIFSLPAESTEDGPVVTLPEPKLALPRHRKVPEEKAETRWERYARLKGITKKKRERMVWDEHAKEWRPRFGYK 447 + A E+ P A+ SE + VS D L YDLG+L A+D HP E ++ A +NVQ L+ AIF LP E T+ GP+ LP +PR + +P+ K ETRWE++AR KGI KK+ERMVWDE + W PR+GYK Sbjct: 3 IKAAEIAPAAY--SEGKNSSIVSKQDDLTYDLGNLAAFDTHPFIVKNLTNENE--IKASARDNVQLLINAIFDLPREMTDVGPMSKLPVGTTLIPREKPLPKPKVETRWEKFAREKGIENKKKERMVWDEEKQAWAPRWGYK 140
BLAST of mRNA_M-pyrifera_M_contig100854.189.1 vs. uniprot
Match: A0A067CPT1_SAPPC (Ribosome biogenesis regulatory protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CPT1_SAPPC) HSP 1 Score: 118 bits (295), Expect = 2.540e-29 Identity = 63/142 (44.37%), Postives = 87/142 (61.27%), Query Frame = 1 Query: 22 VSAKELVPEAFGVSEERVVGKVSASDALEYDLGHLMAYDPHPLDPGRFARRKEAHLQKRATENVQKLVGAIFSLPAESTEDGPVVTLPEPKLALPRHRKVPEEKAETRWERYARLKGITKKKRERMVWDEHAKEWRPRFGYK 447 + A E+ P A+ SE V+ +D L YDLG+L A+D HP + KE L+ A +NVQ L+ IF LP + T+ GP+ LP +PR + +P+ K ETRWE+YAR KG+ KK++RMVWDE + W PR+GYK Sbjct: 3 IKAAEIAPAAY--SEGARSSVVAKADDLSYDLGNLAAFDTHPFSVKNASDEKE--LKASARDNVQLLINQIFELPRQMTDMGPMAQLPTGTTVIPREKPLPKPKPETRWEKYAREKGVDNKKKDRMVWDEAKQAWAPRWGYK 140
BLAST of mRNA_M-pyrifera_M_contig100854.189.1 vs. uniprot
Match: A0A1V9ZJR0_9STRA (Ribosome biogenesis regulatory protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZJR0_9STRA) HSP 1 Score: 118 bits (295), Expect = 2.640e-29 Identity = 63/142 (44.37%), Postives = 86/142 (60.56%), Query Frame = 1 Query: 22 VSAKELVPEAFGVSEERVVGKVSASDALEYDLGHLMAYDPHPLDPGRFARRKEAHLQKRATENVQKLVGAIFSLPAESTEDGPVVTLPEPKLALPRHRKVPEEKAETRWERYARLKGITKKKRERMVWDEHAKEWRPRFGYK 447 + A E+ P A+ SE V+ +D L YDLG+L A+D HP KE ++ A ENVQ L+ IF LP + T+ GP+ LP +PR + +P+ K ETRWE++AR KGI KK++RMVWDE + W PR+GYK Sbjct: 3 IKAAEIAPAAY--SEGAHTSVVAKADDLSYDLGNLAAFDTHPFGVKNTTDEKE--IKAAARENVQLLINQIFDLPRQMTDMGPMAQLPAGSTVIPREKPLPKPKVETRWEKFAREKGIDNKKKDRMVWDEAKQAWAPRWGYK 140 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100854.189.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig100854.189.1 >prot_M-pyrifera_M_contig100854.189.1 ID=prot_M-pyrifera_M_contig100854.189.1|Name=mRNA_M-pyrifera_M_contig100854.189.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=149bp MSHSTEVVSAKELVPEAFGVSEERVVGKVSASDALEYDLGHLMAYDPHPLback to top mRNA from alignment at M-pyrifera_M_contig100854:151..597+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig100854.189.1 ID=mRNA_M-pyrifera_M_contig100854.189.1|Name=mRNA_M-pyrifera_M_contig100854.189.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=447bp|location=Sequence derived from alignment at M-pyrifera_M_contig100854:151..597+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig100854:151..597+ >mRNA_M-pyrifera_M_contig100854.189.1 ID=mRNA_M-pyrifera_M_contig100854.189.1|Name=mRNA_M-pyrifera_M_contig100854.189.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=894bp|location=Sequence derived from alignment at M-pyrifera_M_contig100854:151..597+ (Macrocystis pyrifera P11B4 male)back to top |