mRNA_M-pyrifera_M_contig100846.187.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig100846.187.1 vs. uniprot
Match: A0A355G5X6_9PLAN (Tyr recombinase domain-containing protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A355G5X6_9PLAN) HSP 1 Score: 349 bits (896), Expect = 5.040e-120 Identity = 171/207 (82.61%), Postives = 188/207 (90.82%), Query Frame = 1 Query: 1 KTGMLYVRNNPHLGWQVKTRNEREIPLINELRDVLKITVGDRLTGPVFLQRRYLSTSTRPELNGHTERQLEDLLQQRVTQEETDSGKTINRSQWMKLSRMVWRDCGALKTDRIRSEFIRLTKRLELPHFTAPKSLRHLFATCLQDGNVDPLIRSELMGHSTSATNGASHGLGMTATYTHSRPETKRKQLTDALSFRLAVQIAKLWHS 621 K G+LY+RN PHLGWQVKTRNEREIPLI+ELRDVLKITVG+R+TGPVFLQRRY S S RPE+N H+E+QLEDLLQQR+ QEE DSGK INRSQWMKLSR +WR+CGALKTDRIR+EFIRLTK++ELP FTAPKSLRHLFATCLQDGNVDPLIRSELMGHSTSATNGASHGLGMTATYTHSRPETKR+QL+ AL R A +IA W S Sbjct: 43 KAGILYIRNKPHLGWQVKTRNEREIPLIDELRDVLKITVGNRVTGPVFLQRRYSSGSVRPEINDHSEKQLEDLLQQRIAQEEADSGKAINRSQWMKLSRTIWRNCGALKTDRIRTEFIRLTKQIELPQFTAPKSLRHLFATCLQDGNVDPLIRSELMGHSTSATNGASHGLGMTATYTHSRPETKRQQLSQALMIRPAREIANTWFS 249
BLAST of mRNA_M-pyrifera_M_contig100846.187.1 vs. uniprot
Match: A0A2E2BW90_9PLAN (Uncharacterized protein n=2 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2BW90_9PLAN) HSP 1 Score: 349 bits (896), Expect = 4.920e-117 Identity = 171/207 (82.61%), Postives = 188/207 (90.82%), Query Frame = 1 Query: 1 KTGMLYVRNNPHLGWQVKTRNEREIPLINELRDVLKITVGDRLTGPVFLQRRYLSTSTRPELNGHTERQLEDLLQQRVTQEETDSGKTINRSQWMKLSRMVWRDCGALKTDRIRSEFIRLTKRLELPHFTAPKSLRHLFATCLQDGNVDPLIRSELMGHSTSATNGASHGLGMTATYTHSRPETKRKQLTDALSFRLAVQIAKLWHS 621 K G+LY+RN PHLGWQVKTRNEREIPLI+ELRDVLKITVG+R+TGPVFLQRRY S S RPE+N H+E+QLEDLLQQR+ QEE DSGK INRSQWMKLSR +WR+CGALKTDRIR+EFIRLTK++ELP FTAPKSLRHLFATCLQDGNVDPLIRSELMGHSTSATNGASHGLGMTATYTHSRPETKR+QL+ AL R A +IA W S Sbjct: 250 KAGILYIRNKPHLGWQVKTRNEREIPLIDELRDVLKITVGNRVTGPVFLQRRYSSGSVRPEINDHSEKQLEDLLQQRIAQEEADSGKAINRSQWMKLSRTIWRNCGALKTDRIRTEFIRLTKQIELPQFTAPKSLRHLFATCLQDGNVDPLIRSELMGHSTSATNGASHGLGMTATYTHSRPETKRQQLSQALMIRPAREIANTWFS 456
BLAST of mRNA_M-pyrifera_M_contig100846.187.1 vs. uniprot
Match: A0A2E7KDN1_9PLAN (Uncharacterized protein (Fragment) n=5 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KDN1_9PLAN) HSP 1 Score: 348 bits (892), Expect = 1.130e-116 Identity = 172/203 (84.73%), Postives = 187/203 (92.12%), Query Frame = 1 Query: 1 KTGMLYVRNNPHLGWQVKTRNEREIPLINELRDVLKITVGDRLTGPVFLQRRYLSTSTRPELNGHTERQLEDLLQQRVTQEETDSGKTINRSQWMKLSRMVWRDCGALKTDRIRSEFIRLTKRLELPHFTAPKSLRHLFATCLQDGNVDPLIRSELMGHSTSATNGASHGLGMTATYTHSRPETKRKQLTDALSFRLAVQIAK 609 KTGML+VRN PHLGWQVKTRNEREIPLI+ELRDVLKITVGDR+TGPVFLQRR S +PELN TE QLEDLLQQR+ QEE D+ K I+RSQWMKLSR +WRDCGALKTDRIRSEFIRLTKRLELPHFTAPKSLRHLFATCLQDGNVDPLIRSELMGHSTSA+NGASHGLGMTATYTHSRPETKR+QL DALS R++V++A+ Sbjct: 234 KTGMLHVRNKPHLGWQVKTRNEREIPLIDELRDVLKITVGDRVTGPVFLQRRCSSPFAQPELNSQTENQLEDLLQQRIAQEEADASKAISRSQWMKLSRTIWRDCGALKTDRIRSEFIRLTKRLELPHFTAPKSLRHLFATCLQDGNVDPLIRSELMGHSTSASNGASHGLGMTATYTHSRPETKRRQLKDALSQRISVKVAR 436
BLAST of mRNA_M-pyrifera_M_contig100846.187.1 vs. uniprot
Match: A0A6I6AGK0_9PLAN (Tyrosine-type recombinase/integrase n=2 Tax=Planctomycetaceae TaxID=126 RepID=A0A6I6AGK0_9PLAN) HSP 1 Score: 347 bits (889), Expect = 1.020e-115 Identity = 170/204 (83.33%), Postives = 187/204 (91.67%), Query Frame = 1 Query: 7 GMLYVRNNPHLGWQVKTRNEREIPLINELRDVLKITVGDRLTGPVFLQRRYLSTSTRPELNGHTERQLEDLLQQRVTQEETDSGKTINRSQWMKLSRMVWRDCGALKTDRIRSEFIRLTKRLELPHFTAPKSLRHLFATCLQDGNVDPLIRSELMGHSTSATNGASHGLGMTATYTHSRPETKRKQLTDALSFRLAVQIAKLWH 618 GMLYVRN PHLGWQVKTRNEREIPLI+ELRDVL I+VGDR+TGPVFLQRRY S S RPE+N H+E+QLEDLLQQR+ QEET SGK INR+QW+ +SR +WRD GALKTDRIR+EFIRLTK+++LP FTAPKSLRHLFATCLQDGNVDPLIRSELMGHSTSATNGASHGLGMTATYTHSRPETKRKQL +AL RLAVQIAK W+ Sbjct: 252 GMLYVRNKPHLGWQVKTRNEREIPLIDELRDVLTISVGDRVTGPVFLQRRYSSGSVRPEINDHSEKQLEDLLQQRLAQEETASGKAINRNQWLNISRTIWRDSGALKTDRIRTEFIRLTKQIDLPQFTAPKSLRHLFATCLQDGNVDPLIRSELMGHSTSATNGASHGLGMTATYTHSRPETKRKQLANALLIRLAVQIAKTWY 455
BLAST of mRNA_M-pyrifera_M_contig100846.187.1 vs. uniprot
Match: A0A517PVX9_9PLAN (Site-specific tyrosine recombinase XerC n=1 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A517PVX9_9PLAN) HSP 1 Score: 332 bits (851), Expect = 3.820e-110 Identity = 165/205 (80.49%), Postives = 180/205 (87.80%), Query Frame = 1 Query: 1 KTGMLYVRNNPHLGWQVKTRNEREIPLINELRDVLKITVGDRLTGPVFLQRRYLSTSTRPELNGHTERQLEDLLQQRVTQEETDSGKTINRSQWMKLSRMVWRDCGALKTDRIRSEFIRLTKRLELPHFTAPKSLRHLFATCLQDGNVDPLIRSELMGHSTSATNGASHGLGMTATYTHSRPETKRKQLTDALSFRLAVQIAKLW 615 KTGML++RN PHLGWQVKTRNER+IPLI+ELRDVLKITVGDR+TGPVF+QRRY S RPELN HTE QLE LQQRV QE T S K INR+QWMK+SR +WRD GALKTDRIRSEFI+LTK LELPHFTAPKSLRHLFAT LQDGNVDPLIRSELMGHSTSATNGASHGLGMTATYTHSRP TKR QL+ A+S R A+ +A+ W Sbjct: 250 KTGMLFIRNKPHLGWQVKTRNERDIPLIDELRDVLKITVGDRVTGPVFMQRRYTSAIVRPELNDHTENQLEATLQQRVVQEVTTSSKAINRNQWMKISRTIWRDSGALKTDRIRSEFIKLTKLLELPHFTAPKSLRHLFATSLQDGNVDPLIRSELMGHSTSATNGASHGLGMTATYTHSRPYTKRIQLSQAMSIRPAISMARGW 454
BLAST of mRNA_M-pyrifera_M_contig100846.187.1 vs. uniprot
Match: A0A517VKL9_9PLAN (Site-specific tyrosine recombinase XerC n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517VKL9_9PLAN) HSP 1 Score: 318 bits (815), Expect = 9.940e-105 Identity = 156/203 (76.85%), Postives = 180/203 (88.67%), Query Frame = 1 Query: 1 KTGMLYVRNNPHLGWQVKTRNEREIPLINELRDVLKITVGDRLTGPVFLQRRYLSTSTRPELNGHTERQLEDLLQQRVTQEETDSGKTINRSQWMKLSRMVWRDCGALKTDRIRSEFIRLTKRLELPHFTAPKSLRHLFATCLQDGNVDPLIRSELMGHSTSATNGASHGLGMTATYTHSRPETKRKQLTDALSFRLAVQIAK 609 K GMLYVRN P LGWQVKTRNEREIPLINELRDVLKI +GDR+TGPVFLQRR+ S+S PEL G+TE+QLE+LLQ+RV + E S K+++R+QW + SR +WRDCG LKTDRIR+EFI+LTK++ELP FTAPKSLRHLFATCLQDGNVDPLIRSELMGHSTSATNGASHGLGMTATYTHSRPETKR+QL +AL R ++ IA+ Sbjct: 250 KKGMLYVRNKPRLGWQVKTRNEREIPLINELRDVLKIIIGDRVTGPVFLQRRFASSSVLPELTGYTEKQLENLLQKRVIKAEDSSDKSLDRNQWTQQSRTIWRDCGTLKTDRIRTEFIKLTKQIELPEFTAPKSLRHLFATCLQDGNVDPLIRSELMGHSTSATNGASHGLGMTATYTHSRPETKRRQLQNALLIRPSIIIAR 452
BLAST of mRNA_M-pyrifera_M_contig100846.187.1 vs. uniprot
Match: A0A5A8AY27_9PLAN (Tyrosine-type recombinase/integrase n=2 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A5A8AY27_9PLAN) HSP 1 Score: 305 bits (780), Expect = 3.310e-103 Identity = 151/176 (85.80%), Postives = 165/176 (93.75%), Query Frame = 1 Query: 1 KTGMLYVRNNPHLGWQVKTRNEREIPLINELRDVLKITVGDRLTGPVFLQRRYLSTSTRPELNGHTERQLEDLLQQRVTQEETDSGKTINRSQWMKLSRMVWRDCGALKTDRIRSEFIRLTKRLELPHFTAPKSLRHLFATCLQDGNVDPLIRSELMGHSTSATNGASHGLGMTAT 528 KTGML+VRN PHLGWQVKTRNEREIPLI+E RDVLKITVGDRLTGPVFLQRRYLS S RPELNG TE+QLEDLLQ+RV +EETD GKTINRS+WMKLSR + RDCGALKTDRIR+EFI+LT++++LP TAPKSLRHLFATCLQDGNVDPLIRSELMGHSTSATNGAS+GLGMTAT Sbjct: 22 KTGMLFVRNKPHLGWQVKTRNEREIPLIDEQRDVLKITVGDRLTGPVFLQRRYLSASARPELNGQTEKQLEDLLQRRVAREETDLGKTINRSRWMKLSRAICRDCGALKTDRIRTEFIKLTRQIDLPQLTAPKSLRHLFATCLQDGNVDPLIRSELMGHSTSATNGASYGLGMTAT 197
BLAST of mRNA_M-pyrifera_M_contig100846.187.1 vs. uniprot
Match: A0A518AYY7_9BACT (Site-specific tyrosine recombinase XerC n=1 Tax=Planctomycetes bacterium Pan216 TaxID=2527975 RepID=A0A518AYY7_9BACT) HSP 1 Score: 205 bits (522), Expect = 8.290e-61 Identity = 111/199 (55.78%), Postives = 137/199 (68.84%), Query Frame = 1 Query: 7 GMLYVRNNPHLGWQVKTRNEREIPLINELRDVLKITVGDRLTGPVFLQRRYLSTSTRPELNGHTERQLEDLLQQRVTQEETDSGKTINRSQWMKLSRMVWRDCGALKTDRIRSEFIRLTKRLELPHFTAPKSLRHLFATCLQDGNVDPLIRSELMGHSTSATNGASHGLGMTATYTHSRPETKRKQLTDALSFRLAVQI 603 G L+VRN P LGW+VKTRNER+IPLI +L D+L++ +G+R TGP+F QRR T P ++ L + +R D +R+ +R VWRD GALK D IR EF+R+ KR+ P TAPK LRH FATCLQD NVDPLIR+ELMGHS S+T GA +GLGMTA YTH+RPETKRKQL DAL +R AV + Sbjct: 255 GWLFVRNKPGLGWRVKTRNERDIPLIPQLVDLLRVVIGERRTGPIFQQRRCSDGYTPPLVD------LSPIALERDVVRRADQHPNDDRNASESAARTVWRDIGALKEDWIRREFMRVAKRMGRPEITAPKMLRHTFATCLQDANVDPLIRNELMGHSPSSTKGA-NGLGMTAIYTHTRPETKRKQLEDALIYRPAVAM 446
BLAST of mRNA_M-pyrifera_M_contig100846.187.1 vs. uniprot
Match: A0A2E8CYD5_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E8CYD5_9PLAN) HSP 1 Score: 193 bits (491), Expect = 5.310e-56 Identity = 106/200 (53.00%), Postives = 134/200 (67.00%), Query Frame = 1 Query: 7 GMLYVRNNPHLGWQVKTRNEREIPLINELRDVLKITVGDRLTGPVFLQRRYLSTSTRPELNGHTERQLEDLLQQRVTQEETDSGKTINRSQWMKLSRMVWRDCGALKTDRIRSEFIRLTKRLELPHFTAPKSLRHLFATCLQDGNVDPLIRSELMGHSTSATNGASHGLGMTATYTHSRPETKRKQLTDALSFRLAVQIA 606 G LY+RN P LGW+VKTRNER IPL+ L VL+ +G R TGPVFLQRR S P L + QLE L R ++ + D+G RS ++ +WRD GALK D +R EF+++T + +P TAPK+LRH FATCLQD NVDPLIR+ELMGH+ ++ GLGMTA YTHSRPETKR+QL DA+ R + +A Sbjct: 261 GWLYIRNKPGLGWKVKTRNERAIPLVPALHAVLRQLIGSRDTGPVFLQRRCFS-GHHPPLMDYGREQLERELVSR-SERKGDTG----RSGLAAAAKTIWRDLGALKYDWLRKEFMKITDQCGIPEITAPKTLRHTFATCLQDANVDPLIRNELMGHAPTSFGANGCGLGMTAAYTHSRPETKRRQLEDAMQLRPVISLA 454
BLAST of mRNA_M-pyrifera_M_contig100846.187.1 vs. uniprot
Match: A0A3L7USQ4_9BACT (Site-specific integrase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7USQ4_9BACT) HSP 1 Score: 188 bits (477), Expect = 3.280e-54 Identity = 104/206 (50.49%), Postives = 138/206 (66.99%), Query Frame = 1 Query: 1 KTGMLYVRNNPHLGWQVKTRNEREIPLINELRDVLKITVGDRLTGPVFLQRRYLSTSTRPELNGHTERQLEDLLQQRVTQEETDSGKTINRSQWMKLS-RMVWRDCGALKTDRIRSEFIRLTKRLELPHFTAPKSLRHLFATCLQDGNVDPLIRSELMGHSTSATNGASHGLGMTATYTHSRPETKRKQLTDALSFRLAVQIAKLW 615 K +L +RN P LGWQVKTRNER+IP++ EL +VLK +GDR GP+ ++R ST + T+ + L + E + + + + ++L+ + +WRD GA++TDRIR EF+RLT+ + LP TAPKSLRHLFAT LQD NVDPLIRSELMGHST G GLGMT YTH+RPETK ++L A+S R AV +A+ W Sbjct: 244 KKRLLSIRNKPQLGWQVKTRNERDIPIVPELAEVLKRYIGDRAIGPLIVRRSMQSTGKFVQPLLDTKAMVRALAT--LVPELSSARPNFTQREIVQLAAKRIWRDAGAIRTDRIRCEFVRLTQTIGLPDLTAPKSLRHLFATELQDRNVDPLIRSELMGHSTDRNGG---GLGMTGRYTHTRPETKARELERAMSGRAAVLVAQEW 444 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100846.187.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig100846.187.1 >prot_M-pyrifera_M_contig100846.187.1 ID=prot_M-pyrifera_M_contig100846.187.1|Name=mRNA_M-pyrifera_M_contig100846.187.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=205bp MLYVRNNPHLGWQVKTRNEREIPLINELRDVLKITVGDRLTGPVFLQRRYback to top mRNA from alignment at M-pyrifera_M_contig100846:1..624+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig100846.187.1 ID=mRNA_M-pyrifera_M_contig100846.187.1|Name=mRNA_M-pyrifera_M_contig100846.187.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=624bp|location=Sequence derived from alignment at M-pyrifera_M_contig100846:1..624+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig100846:1..624+ >mRNA_M-pyrifera_M_contig100846.187.1 ID=mRNA_M-pyrifera_M_contig100846.187.1|Name=mRNA_M-pyrifera_M_contig100846.187.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1230bp|location=Sequence derived from alignment at M-pyrifera_M_contig100846:1..624+ (Macrocystis pyrifera P11B4 male)back to top |