mRNA_M-pyrifera_M_contig100820.175.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig100820.175.1 vs. uniprot
Match: A0A3N9UPW1_9GAMM (Uncharacterized protein n=1 Tax=Methylococcus sp. TaxID=39769 RepID=A0A3N9UPW1_9GAMM) HSP 1 Score: 150 bits (379), Expect = 5.030e-41 Identity = 76/188 (40.43%), Postives = 112/188 (59.57%), Query Frame = 1 Query: 1 NDFDAYPIEPDKPPMPARFPVFIREANDHKGPVTELIRNQSELVQYLEYCARAGKLSGAPIVVEFVDTADASGIYRKYSAFRFGDHIVPAHIVTGRDWVVKSTSSERAARYIAEELDYVESNPHAAALMTLFSIANIDFGRIDYSLRGGRIQVFEINTNPIIMHPGESSNPQRTKKRRITAAAIERAL 564 N + +P + P +P RFPVFIR +DH GP+T+LI ++ EL + AG+ +++E++DT A G++RKYS FR G+ I+P HI+ R WV K + E EE ++ NPH ALMT+F A I++GRIDYSL G IQV+EINTNPI+++ + +++ A + AL Sbjct: 103 NHYRIHPCAAE-PDLPLRFPVFIRRIHDHNGPLTQLIHDRLELRNRIHALTLAGEQPNRLMIIEYLDTRGADGLFRKYSTFRIGNQIIPGHIIFSRHWVAKDSPPEPVRE---EERQFLHENPHREALMTIFKEACIEYGRIDYSLHEGNIQVWEINTNPILIYEKYRYAKEMLPLKQLLADRLNEAL 286
BLAST of mRNA_M-pyrifera_M_contig100820.175.1 vs. uniprot
Match: A0A8K1INY2_9CYAN (Uncharacterized protein n=1 Tax=Phormidium sp. PBR-2020 TaxID=2839084 RepID=A0A8K1INY2_9CYAN) HSP 1 Score: 149 bits (375), Expect = 2.220e-40 Identity = 80/192 (41.67%), Postives = 113/192 (58.85%), Query Frame = 1 Query: 1 NDFDAYPIEPDKPPMPARFPVFIREANDHKGPVTELIRNQSELVQYLEYCARAGKLSGAPIVVEFVDTADASGIYRKYSAFRFGDHIVPAHIVTGRDWVVKSTSSERAARYIAEELDYVESNPHAAALMTLFSIANIDFGRIDYSLRGGRIQVFEINTNPIIMHPGESSNPQRTKKRRITAAAIERALISLD 576 N F+ Y + D + +FPVF+R NDH G T L++N+ EL + G+ +++EF DT D GI++KYSAF GD IVP H+ ++WVVK+ S + A R E Y+++NPH + T+F A I +GRIDYS RG +QV+EINTNP I H S++ +K + AIE A +SLD Sbjct: 92 NQFNIYRLTEDISNL--KFPVFVRGENDHSGNQTPLLQNREELDHAIAQLVEKGENRQDKVIIEFCDTRDEQGIFKKYSAFAIGDAIVPVHVRYQKNWVVKANSLKTAQRE-QENQTYIQTNPHIEQIQTIFKTARIQYGRIDYSFRGEDMQVWEINTNPTICHFMTSTDTPLNQK---VSRAIEEAFLSLD 277
BLAST of mRNA_M-pyrifera_M_contig100820.175.1 vs. uniprot
Match: A0A2N2JJJ8_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium HGW-Deltaproteobacteria-14 TaxID=2013741 RepID=A0A2N2JJJ8_9DELT) HSP 1 Score: 147 bits (370), Expect = 6.850e-40 Identity = 79/183 (43.17%), Postives = 109/183 (59.56%), Query Frame = 1 Query: 40 PMPA--RFPVFIREANDHKGPVTELIRNQSELVQYLEYCARAGKLSGAPIVVEFVDTADASGIYRKYSAFRFGDHIVPAHIVTGRDWVVKSTSSERAARYIAEELDYVESNPHAAALMTLFSIANIDFGRIDYSLRGGRIQVFEINTNPIIMHPGESSNPQRTKKRRITAAAIERALISLDES 582 P+P R P F+R +DH GP+TEL+ LE RA + ++VEF+DTAD G+YRKYSAFR GD IVP H++ R WVVK A Y+AEEL Y+E NPH AAL +F A + +GR+DYS+ G +Q +EINTNP+++ P ++ R ++A + AL L + Sbjct: 105 PLPGDLRLPFFMRAEDDHAGPLTELLPT-------LEAARRARRRYPDALLVEFLDTADGDGVYRKYSAFRVGDAIVPRHVLFSRHWVVKHPELLDPA-YLAEELRYLEDNPHEAALRRIFDTAGLTWGRVDYSVHDGVVQTWEINTNPLLVTPEGTAFGARRPAHTLSARLLNTALTQLQRA 279
BLAST of mRNA_M-pyrifera_M_contig100820.175.1 vs. uniprot
Match: A0A534U077_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534U077_9DELT) HSP 1 Score: 148 bits (373), Expect = 8.920e-40 Identity = 78/195 (40.00%), Postives = 112/195 (57.44%), Query Frame = 1 Query: 1 NDFDAYPIEPDKPPMPARFPVFIREANDHKGPVTELIRNQSELVQYLEYCARAGKLSGAPIVVEFVDTADASGIYRKYSAFRFGDHIVPAHIVTGRDWVVKSTSSERAARYIAEELDYVESNPHAAALMTLFSIANIDFGRIDYSLRGGRIQVFEINTNPIIMHPGESSNPQRTKKRRITAAAIERALISLDESA 585 N F AY ++ ARFPVF+R NDH G T L+ + L ++ R G + +V EF DTAD +GIYRK+SAF GD +VP H+ R W++K A +AEE YVE+NPH L +F +A +++GRIDY +R G +Q++EINTNP ++ + P+R A A++ AL ++D A Sbjct: 101 NQFAAYRVDD---AGAARFPVFVRCENDHGGSRTSLLHDPPALAAAIDGLVRDGLAADELLVTEFCDTADGAGIYRKFSAFIVGDRVVPRHVFFSRRWMLKVPDLVTDA-LVAEERTYVETNPHEHELRAIFDLAGLEWGRIDYGVRDGALQIWEINTNPQLLSFQDGGGPRRMPSHARVAVALQEALAAIDRPA 291
BLAST of mRNA_M-pyrifera_M_contig100820.175.1 vs. uniprot
Match: A0A255R424_9BACT (Uncharacterized protein n=2 Tax=Rhodopirellula sp. MGV TaxID=2023130 RepID=A0A255R424_9BACT) HSP 1 Score: 147 bits (370), Expect = 2.640e-39 Identity = 75/163 (46.01%), Postives = 104/163 (63.80%), Query Frame = 1 Query: 1 NDFDAYPIEPDKPPMPARFPVFIREANDHKGPVTELIRNQSEL-VQYLEYCARAGKLSGAPIVVEFVDTADASGIYRKYSAFRFGDHIVPAHIVTGRDWVVKSTSSERAARYIAEELDYVESNPHAAALMTLFSIANIDFGRIDYSLRGGRIQVFEINTNPII 486 NDF Y +E P P RFPVF+R +DHKGP++ LI Q EL Y ++ R GK S +V+E D AD +YRKY+AFR GD I+P H+ G +W VKS +AEE +Y+++ PH L +F +A ++FGRIDY +R G++QV+EINTNP++ Sbjct: 135 NDFTGYRLEDQ--PRPQRFPVFVRGEDDHKGPLSSLIETQPELDAVYEQWSGRWGKAS-RKLVIEHCDVADEHAVYRKYAAFRIGDAILPRHLFFGSNWCVKSWEL-LDEHLLAEEREYIDAFPHHDQLQQIFDLAGVEFGRIDYGVRDGKLQVWEINTNPML 293
BLAST of mRNA_M-pyrifera_M_contig100820.175.1 vs. uniprot
Match: A0A4V3V008_9RHOB (Uncharacterized protein n=1 Tax=Gemmobacter aestuarii TaxID=1445661 RepID=A0A4V3V008_9RHOB) HSP 1 Score: 146 bits (369), Expect = 4.110e-39 Identity = 79/181 (43.65%), Postives = 111/181 (61.33%), Query Frame = 1 Query: 40 PMP-ARFPVFIREANDHKGPVTELIRNQSEL-VQYLEYCARAGKLSGAPIVVEFVDTADASGIYRKYSAFRFGDHIVPAHIVTGRDWVVKSTSSERAARYIAEELDYVESNPHAAALMTLFSIANIDFGRIDYSLRGGRIQVFEINTNPIIMHPGESSNPQRTKKRRITAAAIERALISLD 576 P+P FPVF+R D +G T L+ +++ L + + AR L G + VEF + ADA G+YRKY AFR GD I+P H+ DWVVKS SS R R+IAEE+DY+ +NPH L+ + +A+ DFGRIDY++ G++ VFEIN+NP PG + R ++RRI + A +D Sbjct: 113 PLPDLAFPVFLRREGDAQGAETGLLHDRAALDLAVQDMMARGIPLRGR-LAVEFCNRADADGMYRKYGAFRVGDRILPQHLQISEDWVVKSNSSHRTERHIAEEMDYILTNPHEDVLLRIMDLASADFGRIDYTVLDGKVIVFEINSNPTF--PGIDKDDPRQERRRIVRDRLLAAFQRID 290
BLAST of mRNA_M-pyrifera_M_contig100820.175.1 vs. uniprot
Match: B4S4F5_PROA2 (Uncharacterized protein n=2 Tax=Prosthecochloris TaxID=1101 RepID=B4S4F5_PROA2) HSP 1 Score: 145 bits (366), Expect = 6.720e-39 Identity = 74/168 (44.05%), Postives = 106/168 (63.10%), Query Frame = 1 Query: 1 NDFDAYPIEPDKPPMPARFPVFIREANDHKGPVTELIRNQSELVQYLEYCARAGKLSGAPIVVEFVDTADASGIYRKYSAFRFGDHIVPAHIVTGRDWVVKSTSSERAARYIAEELDYVESNPHAAALMTLFSIANIDFGRIDYSLRGGRIQVFEINTNPIIMHPGES 504 NDF Y P + P+ R+PVF+R A+DH G +T+L+ + +L + L+ +V E+ DT G YRKYSAF GD I+P H+ GR+W+VK + A +I EE Y+E NPHA L ++FS + I +GRIDYS++GGRIQV+EINTNP+++ +S Sbjct: 103 NDFAVY--TPGRGPIRCRYPVFLRVADDHSGSLTDLLYSPVDLRRALKTALDRRIRPSELLVGEYCDTLSEDGFYRKYSAFVIGDAIIPRHVAFGREWMVKLRRTGNRAHHI-EERHYLEHNPHAEELRSIFSHSGISYGRIDYSMKGGRIQVWEINTNPVVVRSKDS 267
BLAST of mRNA_M-pyrifera_M_contig100820.175.1 vs. uniprot
Match: A0A1Q6X3M0_9BACT (Uncharacterized protein n=1 Tax=Acidobacteriales bacterium 13_2_20CM_55_8 TaxID=1803470 RepID=A0A1Q6X3M0_9BACT) HSP 1 Score: 144 bits (363), Expect = 1.950e-38 Identity = 71/162 (43.83%), Postives = 103/162 (63.58%), Query Frame = 1 Query: 46 PARFPVFIREANDHKGPVTELIRNQSELVQYLEYCARAGKLSGAPIVVEFVDTADASGIYRKYSAFRFGDHIVPAHIVTGRDWVVKSTSSERAARYIAEELDYVESNPHAAALMTLFSIANIDFGRIDYSLRGGRIQVFEINTNPIIM----------HPGE 501 P RFPVFIRE ++H G +T+++ + EL L + G +VVEF DT+DA+G+YRKYSAF G IVP H++ R WV+K T+ + EE DY+E NPH A L +F++A++++GRIDYS G + Q++EINTNP+++ HPG+ Sbjct: 116 PFRFPVFIREESEHTGSLTDVLHREQELSSALGRLLKEGHRLENLLVVEFCDTSDAAGVYRKYSAFVVGGEIVPRHLIFSRSWVLK-TADLGTGEMLQEERDYLEKNPHEAWLRDIFALASVEYGRIDYSFLGDKPQIWEINTNPMVLMRPKDYAPVHHPGQ 276
BLAST of mRNA_M-pyrifera_M_contig100820.175.1 vs. uniprot
Match: UPI0012983471 (hypothetical protein n=1 Tax=Roseimaritima sediminicola TaxID=2662066 RepID=UPI0012983471) HSP 1 Score: 143 bits (361), Expect = 2.550e-38 Identity = 76/193 (39.38%), Postives = 109/193 (56.48%), Query Frame = 1 Query: 1 NDFDAYPIEPDKPPMPARFPVFIREANDHKGPVTELIRNQSELVQYLEYCARAGKLSGAPIVVEFVDTADASGIYRKYSAFRFGDHIVPAHIVTGRDWVVKSTSSERAARYIAEELDYVESNPHAAALMTLFSIANIDFGRIDYSLRGGRIQVFEINTNPIIMHPGESSNPQRTKKRRITAAAIERALISLDE 579 NDF A+ + P P RFPVFIR +DHKGP++ L+ +Q+EL ++ R +VVEF D +D G+YRKY+AF+ GD I+P H+ +W VK Y+ EE Y+ +PH L +F A IDFGRIDY + GR+QV+EINTNP++ P+R + + A A+ +D+ Sbjct: 102 NDFRAHRLNTH--PRPTRFPVFIRGEDDHKGPLSPLLHDQAELERWGRRFERRRGGRRGKLVVEFCDVSDGDGVYRKYAAFKIGDQILPRHLFFASEWCVKGWE-HLEENYLDEEWRYLTEDPHREQLRAIFDTAGIDFGRIDYGVCNGRLQVWEINTNPMLPVDYGDGGPRRARVQDWFDARFFAAMRRIDD 291
BLAST of mRNA_M-pyrifera_M_contig100820.175.1 vs. uniprot
Match: A0A168V1D6_9CYAN (Uncharacterized protein n=2 Tax=Phormidium TaxID=1198 RepID=A0A168V1D6_9CYAN) HSP 1 Score: 143 bits (361), Expect = 2.660e-38 Identity = 77/192 (40.10%), Postives = 113/192 (58.85%), Query Frame = 1 Query: 1 NDFDAYPIEPDKPPMPARFPVFIREANDHKGPVTELIRNQSELVQYLEYCARAGKLSGAPIVVEFVDTADASGIYRKYSAFRFGDHIVPAHIVTGRDWVVKSTSSERAARYIAEELDYVESNPHAAALMTLFSIANIDFGRIDYSLRGGRIQVFEINTNPIIMHPGESSNPQRTKKRRITAAAIERALISLD 576 N F+ Y + D + +FPVF+R NDHKG T L++NQ+EL Q + G+ +++EF DT D GI++KYSAF G+ IVP H+ +DWVVK+ + + R E Y+++NPH + +F +A I +GRIDYS G +QV+EINTNP I H +S + + R A +E+A S+D Sbjct: 92 NRFNIYRLTEDISTV--QFPVFVRGENDHKGNQTSLLQNQAELDQSIAKIVNQGESRQDKVIIEFCDTRDDQGIFKKYSAFAIGEAIVPVHVRYQKDWVVKANTLKTDQRE-QENQTYIQTNPHTDKIREIFKLARIQYGRIDYSFSGELMQVWEINTNPTICHFQDSRD---SPLNRQVAEQLEQAFTSID 277 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100820.175.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig100820.175.1 >prot_M-pyrifera_M_contig100820.175.1 ID=prot_M-pyrifera_M_contig100820.175.1|Name=mRNA_M-pyrifera_M_contig100820.175.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=196bp NDFDAYPIEPDKPPMPARFPVFIREANDHKGPVTELIRNQSELVQYLEYCback to top mRNA from alignment at M-pyrifera_M_contig100820:87..674- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig100820.175.1 ID=mRNA_M-pyrifera_M_contig100820.175.1|Name=mRNA_M-pyrifera_M_contig100820.175.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=588bp|location=Sequence derived from alignment at M-pyrifera_M_contig100820:87..674- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig100820:87..674- >mRNA_M-pyrifera_M_contig100820.175.1 ID=mRNA_M-pyrifera_M_contig100820.175.1|Name=mRNA_M-pyrifera_M_contig100820.175.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1176bp|location=Sequence derived from alignment at M-pyrifera_M_contig100820:87..674- (Macrocystis pyrifera P11B4 male)back to top |