mRNA_M-pyrifera_M_contig100733.165.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig100733.165.1 vs. uniprot
Match: A0A5A8DS12_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DS12_CAFRO) HSP 1 Score: 119 bits (298), Expect = 1.540e-28 Identity = 65/134 (48.51%), Postives = 90/134 (67.16%), Query Frame = 1 Query: 28 SRLAFASGNYSIFVLERDA--AGYMQLRATLYGHKEEVKALSFNPTDRNMLLSGGSDGMLVWDVDG----KKLLMTVNVTTRPKDSHESDVECFCWAHEGSTLITGSKDTNVKIWDVARGFTLLETVHGHKSAV 411 S LA+ SGN+SIF+L D+ AG MQ+ L GH V+AL F+PTD ++L+SGG+DG+ VW + K + NV+ +HESDVE +A + + LI+GSKD N+K+WD RG+TLLET+ GHK+AV Sbjct: 1116 SALAYVSGNHSIFILHPDSSPAGAMQVARVLNGHDSPVRALVFHPTDPDVLVSGGADGIFVWSLRAGRPTKVIRSEANVSAE-FPAHESDVEVLVFAFKNN-LISGSKDCNIKVWDADRGYTLLETITGHKAAV 1247
BLAST of mRNA_M-pyrifera_M_contig100733.165.1 vs. uniprot
Match: A0A5A8DER0_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DER0_CAFRO) HSP 1 Score: 119 bits (298), Expect = 1.560e-28 Identity = 65/134 (48.51%), Postives = 90/134 (67.16%), Query Frame = 1 Query: 28 SRLAFASGNYSIFVLERDA--AGYMQLRATLYGHKEEVKALSFNPTDRNMLLSGGSDGMLVWDVDG----KKLLMTVNVTTRPKDSHESDVECFCWAHEGSTLITGSKDTNVKIWDVARGFTLLETVHGHKSAV 411 S LA+ SGN+SIF+L D+ AG MQ+ L GH V+AL F+PTD ++L+SGG+DG+ VW + K + NV+ +HESDVE +A + + LI+GSKD N+K+WD RG+TLLET+ GHK+AV Sbjct: 2301 SALAYVSGNHSIFILHPDSSPAGAMQVARVLNGHDSPVRALVFHPTDPDVLVSGGADGIFVWSLRAGRPTKVIRSEANVSAE-FPAHESDVEVLVFAFKNN-LISGSKDCNIKVWDADRGYTLLETITGHKAAV 2432
BLAST of mRNA_M-pyrifera_M_contig100733.165.1 vs. uniprot
Match: A0A151Z8C0_9MYCE (Uncharacterized protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151Z8C0_9MYCE) HSP 1 Score: 117 bits (293), Expect = 6.740e-28 Identity = 55/127 (43.31%), Postives = 82/127 (64.57%), Query Frame = 1 Query: 31 RLAFASGNYSIFVLERDAAGYMQLRATLYGHKEEVKALSFNPTDRNMLLSGGSDGMLVWDVDGKKLLMTVNVTTRPKDSHESDVECFCWAHEGSTLITGSKDTNVKIWDVARGFTLLETVHGHKSAV 411 RLAF SGN SI++ + D G + L GHK V L F+P D ++L+SGG DG+++WD ++ ++ P D+HES+VEC W +G+ L++G KD N+K+WD + F LLET+ GHK++V Sbjct: 69 RLAFVSGNASIYITKEDHLGNFVVENVLIGHKTTVNCLLFHPRD-SILISGGFDGLIIWDYLKGFIIKRISPHQDP-DAHESNVECLTWICDGTALVSGGKDANIKVWDYLKNFKLLETITGHKASV 193
BLAST of mRNA_M-pyrifera_M_contig100733.165.1 vs. uniprot
Match: A0A8J4Q183_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4Q183_9MYCE) HSP 1 Score: 105 bits (263), Expect = 7.370e-24 Identity = 50/126 (39.68%), Postives = 81/126 (64.29%), Query Frame = 1 Query: 28 SRLAFASGNYSIFVLERDAAGYMQLRATLYGHKEEVKALSFNPTDRNMLLSGGSDGMLVWDVDGKKLLMTVNVTTRPKDSHESDVECFCWAHEGSTLITGSKDTNVKIWDVARGFTLLETVHGHKS 405 SR AF SGN SI++ + + G + L GH V L F+PT+ + +SGG +G++VWD+ ++ + P D+H++ +EC W +EG++L++GSKD+N+K+WD R F L+ET+ GHK+ Sbjct: 53 SRFAFVSGNGSIYITKENDDGNFIVENVLAGHTHTVNCLLFHPTEP-IFVSGGFEGIIVWDLLSGFIIKKMISHIDP-DAHDARIECLYWLYEGTSLVSGSKDSNIKVWDSLRKFELIETITGHKA 176
BLAST of mRNA_M-pyrifera_M_contig100733.165.1 vs. uniprot
Match: Q54M39_DICDI (Uncharacterized protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54M39_DICDI) HSP 1 Score: 101 bits (252), Expect = 2.260e-22 Identity = 54/138 (39.13%), Postives = 83/138 (60.14%), Query Frame = 1 Query: 1 CVNSAPHPLSRLAFASGNYSIFVLERDAAGYMQLRATLYGHKEEVKALSFNPTDRNMLLSGGSDGMLVWDVDGKKLLMTVNVTTRPKDSHESDVECFCWAHEGSTLITGSKDTNVKIWD-VARGFTLLETVHGHKSAV 411 C+ +P SR AF SGN SI++ + ++ L GH V L F+P + +L+SGG DG+ +WD K ++ +T + DSH+S VE W + G++L+TGSKD+ +KIWD + +G+ LLET+ HK+ V Sbjct: 55 CIGFSPDD-SRFAFVSGNGSIYIAKDMKNDSFEIENVLTGHSHSVDCLLFHPKEP-ILVSGGFDGIFIWDYL-KGFIIKKVLTHKDIDSHDSKVEALAWLYNGTSLVTGSKDSTIKIWDFMEQGYPLLETITAHKAPV 189
BLAST of mRNA_M-pyrifera_M_contig100733.165.1 vs. uniprot
Match: A0A196SAF3_BLAHN (WD-40 repeat protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SAF3_BLAHN) HSP 1 Score: 99.0 bits (245), Expect = 1.970e-21 Identity = 45/123 (36.59%), Postives = 74/123 (60.16%), Query Frame = 1 Query: 34 LAFASGNYSIFVLERDAAGYMQLRATLYGHKEEVKALSFNPTDRNMLLSGGSDGMLVWDVDGKKLLMTVNVTTRPKDSHESDVECFCWAHEGSTLITGSKDTNVKIWDVARGFTLLETVHGHK 402 L + +G + I V + DA + + L GHK ++ + +P+ + +L+S G +G+ VWD++ + + T P D+HE DVEC W ++G L TG D+ VK+WDV R F++LET++ HK Sbjct: 53 LFYVNGTHGISVCQSDANNHFTRISVLQGHKRRIRQMQCHPS-KPILVSCGDEGIFVWDLNTHACIKKITEDTCP-DAHEEDVECMIWLYDGIVLATGGSDSTVKLWDVERDFSILETINAHK 173
BLAST of mRNA_M-pyrifera_M_contig100733.165.1 vs. uniprot
Match: A0A5A8CZ90_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CZ90_CAFRO) HSP 1 Score: 84.7 bits (208), Expect = 1.350e-16 Identity = 45/97 (46.39%), Postives = 65/97 (67.01%), Query Frame = 1 Query: 133 VKALSFNPTDRNMLLSGGSDGMLVWDVDG----KKLLMTVNVTTRPKDSHESDVECFCWAHEGSTLITGSKDTNVKIWDVARGFTLLETVHGHKSAV 411 V+AL F+PTD ++L+S +DG+ VW + K + NV+ +HESDVE +A + + LI+GSKD N+K+WD RG+TLLET+ GHK+AV Sbjct: 274 VRALVFHPTDPDVLVSARADGIFVWSLRAGRPTKVIRSEANVSAE-FPAHESDVEVLVFAFKNN-LISGSKDCNIKVWDADRGYTLLETITGHKAAV 368
BLAST of mRNA_M-pyrifera_M_contig100733.165.1 vs. uniprot
Match: A0A6G0X1U7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X1U7_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 1.900e-16 Identity = 47/132 (35.61%), Postives = 77/132 (58.33%), Query Frame = 1 Query: 28 SRLAFASGNYSIFVLERDAAGY--MQLRATLYGHKEEVKALSFNPTDRNMLLSGGSDGMLVWDVDGKKLLMTVNVTTRPKDSHESDVECFCWAHEGSTLITGSKDTNVKIW--DVARGF--TLLETVHGHKS 405 +RLAF SGN +IFV D G + L + K++V A+ F D + L+ G++G+ ++ +L+ + + +++HESDV C CW + G L+TGSKD+N+K+W D + T +ET+ GHK+ Sbjct: 35 TRLAFVSGNNAIFVCRLDTNGTRGVVLEKVIPLFKKDVHAILFFQEDEDQLVVVGNEGINFVNITSGELVYRIRIAQ--ENNHESDVTCACWMYGGLVLVTGSKDSNIKLWMRDATHSYEWTCVETITGHKA 164
BLAST of mRNA_M-pyrifera_M_contig100733.165.1 vs. uniprot
Match: A0A7E6EDT3_9CHIR (Coronin n=7 Tax=Chiroptera TaxID=9397 RepID=A0A7E6EDT3_9CHIR) HSP 1 Score: 65.5 bits (158), Expect = 9.370e-10 Identity = 35/101 (34.65%), Postives = 55/101 (54.46%), Query Frame = 1 Query: 109 TLYGHKEEVKALSFNPTDRNMLLSGGSDGMLV-WDVDGKKLLMTVNVTTRPKDSHESDVECFCWAHEGSTLITGSKDTNVKIWDVARGFTLLETVHGHKSA 408 TL GH + V L ++PT RN+LLS GSD +++ W+V ++L++++ D H + CW GS L T KD ++I D +G + E H+ A Sbjct: 85 TLEGHSKRVGILCWHPTARNVLLSAGSDNVIIIWNVGTGEVLLSLD------DMHPDIIHSVCWNSNGSLLATTCKDKTLRIIDPRKGQVVAERARPHEGA 179
BLAST of mRNA_M-pyrifera_M_contig100733.165.1 vs. uniprot
Match: A0A401NR49_SCYTO (Coronin n=1 Tax=Scyliorhinus torazame TaxID=75743 RepID=A0A401NR49_SCYTO) HSP 1 Score: 59.7 bits (143), Expect = 4.600e-8 Identity = 34/100 (34.00%), Postives = 52/100 (52.00%), Query Frame = 1 Query: 112 LYGHKEEVKALSFNPTDRNMLLSGGSDGMLV-WDVDGKKLLMTVNVTTRPKDSHESDVECFCWAHEGSTLITGSKDTNVKIWDVARGFTLLETVHGHKSA 408 L GH + V +S++PT RN+LLS GSD M++ W+V + L+T++ D H + CW GS + T KD V++ D + E H+ A Sbjct: 21 LEGHSKRVGIISWHPTARNILLSAGSDNMIIIWNVGTGEPLITLD------DLHSDLIYNVCWNRNGSLICTTCKDKKVRVIDPREQRIIAEKNKAHEGA 114 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100733.165.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig100733.165.1 >prot_M-pyrifera_M_contig100733.165.1 ID=prot_M-pyrifera_M_contig100733.165.1|Name=mRNA_M-pyrifera_M_contig100733.165.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=137bp CVNSAPHPLSRLAFASGNYSIFVLERDAAGYMQLRATLYGHKEEVKALSFback to top mRNA from alignment at M-pyrifera_M_contig100733:45..591+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig100733.165.1 ID=mRNA_M-pyrifera_M_contig100733.165.1|Name=mRNA_M-pyrifera_M_contig100733.165.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=547bp|location=Sequence derived from alignment at M-pyrifera_M_contig100733:45..591+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig100733:45..591+ >mRNA_M-pyrifera_M_contig100733.165.1 ID=mRNA_M-pyrifera_M_contig100733.165.1|Name=mRNA_M-pyrifera_M_contig100733.165.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=822bp|location=Sequence derived from alignment at M-pyrifera_M_contig100733:45..591+ (Macrocystis pyrifera P11B4 male)back to top |