mRNA_M-pyrifera_M_contig10069.157.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig10069.157.1 vs. uniprot
Match: A0A6H5J8P8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8P8_9PHAE) HSP 1 Score: 173 bits (438), Expect = 5.260e-51 Identity = 85/92 (92.39%), Postives = 88/92 (95.65%), Query Frame = 1 Query: 1 VLSRLEHVWGPGDGRPVEDLKVAIDQLLVEFLLSRQLDEAAACVKELDCSLFHHEIVKRAVKTALDKTDDDRTSMSSLLVYLNNNEVISDGQ 276 VLSRLEHVWGPGDGRPVE+LKVAIDQLLVE+LLSRQ DEAAACVKELDCSLFHHEIVKRAVKTALDKTDDDRT+MSSLL YLN NEVISD Q Sbjct: 254 VLSRLEHVWGPGDGRPVEELKVAIDQLLVEYLLSRQQDEAAACVKELDCSLFHHEIVKRAVKTALDKTDDDRTAMSSLLAYLNKNEVISDEQ 345
BLAST of mRNA_M-pyrifera_M_contig10069.157.1 vs. uniprot
Match: D7G128_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G128_ECTSI) HSP 1 Score: 171 bits (433), Expect = 4.950e-50 Identity = 84/92 (91.30%), Postives = 87/92 (94.57%), Query Frame = 1 Query: 1 VLSRLEHVWGPGDGRPVEDLKVAIDQLLVEFLLSRQLDEAAACVKELDCSLFHHEIVKRAVKTALDKTDDDRTSMSSLLVYLNNNEVISDGQ 276 VLSRLEHVWGPGDGRPVE+LKVAIDQLLVE+LLSRQ DEAAACVKELDCSLFHHEIVKRAVK ALDKTDDDRT+MSSLL YLN NEVISD Q Sbjct: 251 VLSRLEHVWGPGDGRPVEELKVAIDQLLVEYLLSRQQDEAAACVKELDCSLFHHEIVKRAVKAALDKTDDDRTAMSSLLAYLNKNEVISDEQ 342
BLAST of mRNA_M-pyrifera_M_contig10069.157.1 vs. uniprot
Match: A0A835ZC70_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC70_9STRA) HSP 1 Score: 128 bits (322), Expect = 1.550e-33 Identity = 62/92 (67.39%), Postives = 77/92 (83.70%), Query Frame = 1 Query: 1 VLSRLEHVWGPGDGRPVEDLKVAIDQLLVEFLLSRQLDEAAACVKELDCSLFHHEIVKRAVKTALDKTDDDRTSMSSLLVYLNNNEVISDGQ 276 VLSR+E VWGPGDGR V++LKVAIDQLL E+L+SRQ+DEA CV++L+C+ FHHEIVKRAVK A+DK + D T+MSSLL L++ EVIS Q Sbjct: 258 VLSRVERVWGPGDGRSVQELKVAIDQLLEEYLMSRQMDEAIQCVRDLNCAHFHHEIVKRAVKQAIDKGEQDCTAMSSLLAQLHSLEVISTAQ 349
BLAST of mRNA_M-pyrifera_M_contig10069.157.1 vs. uniprot
Match: A0A7S2B0R3_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B0R3_9STRA) HSP 1 Score: 115 bits (288), Expect = 1.650e-28 Identity = 53/90 (58.89%), Postives = 69/90 (76.67%), Query Frame = 1 Query: 7 SRLEHVWGPGDGRPVEDLKVAIDQLLVEFLLSRQLDEAAACVKELDCSLFHHEIVKRAVKTALDKTDDDRTSMSSLLVYLNNNEVISDGQ 276 SR+E +WGPGDGRPV +LKVAIDQLLVE+LLS+QL EA CV+E++ FHHE+VKRAV LDK D++ +M +LL +L+ E +S Q Sbjct: 285 SRVERIWGPGDGRPVSELKVAIDQLLVEYLLSKQLSEAERCVREMEVPHFHHELVKRAVAAVLDKPADEQAAMLNLLAHLHKTETVSPAQ 374
BLAST of mRNA_M-pyrifera_M_contig10069.157.1 vs. uniprot
Match: A0A0P1AHZ2_PLAHL (Ma3 domain-containing protein isoform 1 n=2 Tax=Peronosporaceae TaxID=4777 RepID=A0A0P1AHZ2_PLAHL) HSP 1 Score: 113 bits (282), Expect = 7.560e-28 Identity = 54/93 (58.06%), Postives = 71/93 (76.34%), Query Frame = 1 Query: 1 VLSRLEHVWGPGDGRPVEDLKVAIDQLLVEFLLSRQLDEAAACVKELDCSLFHHEIVKRAVKTALDKTDD-DRTSMSSLLVYLNNNEVISDGQ 276 +R+E WGPGDGRPVE+LKVAIDQL E+LLSR LDEAA CV+EL+ FHHE+VKR + +L++ + + +M+SLL YL +NEV+S GQ Sbjct: 257 ATARMEKAWGPGDGRPVEELKVAIDQLTKEYLLSRDLDEAARCVRELNVPHFHHEVVKRGINNSLEEGGEANSAAMASLLAYLVSNEVVSTGQ 349
BLAST of mRNA_M-pyrifera_M_contig10069.157.1 vs. uniprot
Match: A0A0W8DUN2_PHYNI (tRNA 2'-phosphotransferase 1 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DUN2_PHYNI) HSP 1 Score: 111 bits (277), Expect = 8.450e-28 Identity = 53/93 (56.99%), Postives = 71/93 (76.34%), Query Frame = 1 Query: 1 VLSRLEHVWGPGDGRPVEDLKVAIDQLLVEFLLSRQLDEAAACVKELDCSLFHHEIVKRAVKTALDKTDD-DRTSMSSLLVYLNNNEVISDGQ 276 +R+E WGPGDGRPVE+LKVAIDQL E+LLSR L+EAA CV+EL+ FHHE+VKR + +L++ + + +M+SLL YL +NEV+S GQ Sbjct: 157 ATARMEKAWGPGDGRPVEELKVAIDQLTKEYLLSRDLEEAARCVRELNVPHFHHEVVKRGITNSLEEGGEANSAAMASLLAYLVSNEVVSTGQ 249
BLAST of mRNA_M-pyrifera_M_contig10069.157.1 vs. uniprot
Match: A0A484EHM1_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EHM1_BRELC) HSP 1 Score: 111 bits (278), Expect = 3.110e-27 Identity = 54/93 (58.06%), Postives = 71/93 (76.34%), Query Frame = 1 Query: 1 VLSRLEHVWGPGDGRPVEDLKVAIDQLLVEFLLSRQLDEAAACVKELDCSLFHHEIVKRAVKTALDKTDD-DRTSMSSLLVYLNNNEVISDGQ 276 +R+E WGPGDGRPVE+LKVAIDQL E+LLSR LDEAA CV+EL+ FHHE+VKR + +L++ + + +M+SLL YL +NEV+S GQ Sbjct: 265 ATARMEKAWGPGDGRPVEELKVAIDQLTKEYLLSRDLDEAARCVRELNVPHFHHEVVKRGLMNSLEEGGEANGAAMASLLAYLVSNEVVSTGQ 357
BLAST of mRNA_M-pyrifera_M_contig10069.157.1 vs. uniprot
Match: D0NNQ0_PHYIT (Programmed cell death protein, putative n=11 Tax=Phytophthora TaxID=4783 RepID=D0NNQ0_PHYIT) HSP 1 Score: 111 bits (277), Expect = 4.430e-27 Identity = 53/93 (56.99%), Postives = 71/93 (76.34%), Query Frame = 1 Query: 1 VLSRLEHVWGPGDGRPVEDLKVAIDQLLVEFLLSRQLDEAAACVKELDCSLFHHEIVKRAVKTALDKTDD-DRTSMSSLLVYLNNNEVISDGQ 276 +R+E WGPGDGRPVE+LKVAIDQL E+LLSR L+EAA CV+EL+ FHHE+VKR + +L++ + + +M+SLL YL +NEV+S GQ Sbjct: 266 ATARMEKAWGPGDGRPVEELKVAIDQLTKEYLLSRDLEEAARCVRELNVPHFHHEVVKRGITNSLEEGGEANSAAMASLLAYLVSNEVVSTGQ 358
BLAST of mRNA_M-pyrifera_M_contig10069.157.1 vs. uniprot
Match: H3H0M6_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H0M6_PHYRM) HSP 1 Score: 110 bits (276), Expect = 2.410e-26 Identity = 53/93 (56.99%), Postives = 71/93 (76.34%), Query Frame = 1 Query: 1 VLSRLEHVWGPGDGRPVEDLKVAIDQLLVEFLLSRQLDEAAACVKELDCSLFHHEIVKRAVKTALDKTDD-DRTSMSSLLVYLNNNEVISDGQ 276 +R+E WGPGDGRPVE+LKVAIDQL E+LLSR L+EAA CV+EL+ FHHE+VKR + +LD+ + + +M+SLL YL ++EV+S GQ Sbjct: 1493 ATARMEKAWGPGDGRPVEELKVAIDQLTKEYLLSRDLEEAARCVRELNVPHFHHEVVKRGITNSLDEGGEANSAAMASLLAYLVSHEVVSTGQ 1585
BLAST of mRNA_M-pyrifera_M_contig10069.157.1 vs. uniprot
Match: A0A3R7KAC2_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KAC2_9STRA) HSP 1 Score: 109 bits (273), Expect = 4.230e-26 Identity = 52/93 (55.91%), Postives = 71/93 (76.34%), Query Frame = 1 Query: 1 VLSRLEHVWGPGDGRPVEDLKVAIDQLLVEFLLSRQLDEAAACVKELDCSLFHHEIVKRAVKTALDKTDD-DRTSMSSLLVYLNNNEVISDGQ 276 +R+E WGPGDGRPVE+LKVAIDQL E+LLSR L+EAA CV+EL+ FHHE+VKR + +L++ + + +M+SLL YL ++EV+S GQ Sbjct: 388 ATARMEKAWGPGDGRPVEELKVAIDQLTKEYLLSRDLEEAARCVRELNVPHFHHEVVKRGITNSLEEGGEANSAAMASLLAYLISHEVVSSGQ 480 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10069.157.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig10069.157.1 >prot_M-pyrifera_M_contig10069.157.1 ID=prot_M-pyrifera_M_contig10069.157.1|Name=mRNA_M-pyrifera_M_contig10069.157.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=92bp VLSRLEHVWGPGDGRPVEDLKVAIDQLLVEFLLSRQLDEAAACVKELDCSback to top mRNA from alignment at M-pyrifera_M_contig10069:6373..9702+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig10069.157.1 ID=mRNA_M-pyrifera_M_contig10069.157.1|Name=mRNA_M-pyrifera_M_contig10069.157.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3330bp|location=Sequence derived from alignment at M-pyrifera_M_contig10069:6373..9702+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig10069:6373..9702+ >mRNA_M-pyrifera_M_contig10069.157.1 ID=mRNA_M-pyrifera_M_contig10069.157.1|Name=mRNA_M-pyrifera_M_contig10069.157.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=552bp|location=Sequence derived from alignment at M-pyrifera_M_contig10069:6373..9702+ (Macrocystis pyrifera P11B4 male)back to top |