mRNA_M-pyrifera_M_contig100531.116.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig100531.116.1
Unique NamemRNA_M-pyrifera_M_contig100531.116.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig100531.116.1 vs. uniprot
Match: A0A518ADL5_9PLAN (NAD-dependent malic enzyme n=9 Tax=Gimesia TaxID=1649453 RepID=A0A518ADL5_9PLAN)

HSP 1 Score: 387 bits (993), Expect = 4.960e-130
Identity = 185/226 (81.86%), Postives = 209/226 (92.48%), Query Frame = 1 
Query:    1 AFCNEPDDLDKHIFLRQLQDENETLFYQLLLIHVKEMMPLVYTPVVGLACQRFSHIYRRARGVFIAYPNRDSMDEILSNVERDIDVIVVTDGERILGLGDQGAGGMGIPIGKLSLYSLCGGIHPSKTLPILLDLGTNNAERLDDPQYIGWRNHRVKGTDYDDFVEQFVQAVIKRFPKVLLQWEDFASVDAERILKKYRDRLCTFNDDIQGTAAVTTGTLLAAVEAA 678
            AFC+  +D+DKHIFLRQLQDENETL+Y+LLL H+ EMMP+VYTPVVGLAC+RFSHIYRR RG+FI+YP RD MDEIL N+ERDI+VIVVTDGERILGLGDQGAGGMGIPIGKLSLY+LCGGI PSKTLPILLDLGTNN ERL+DP+Y+GWR HR+KG +YD F++QFV+AV KRFP VLLQWEDFASVDAERIL +YRD LCTFNDDIQGTAAVTTGT+LAA+EAA
Sbjct:   62 AFCDFQNDIDKHIFLRQLQDENETLYYRLLLEHITEMMPIVYTPVVGLACERFSHIYRRPRGIFISYPERDQMDEILENIERDIEVIVVTDGERILGLGDQGAGGMGIPIGKLSLYTLCGGIAPSKTLPILLDLGTNNEERLEDPRYVGWREHRIKGAEYDAFIDQFVEAVKKRFPNVLLQWEDFASVDAERILDRYRDDLCTFNDDIQGTAAVTTGTILAAIEAA 287
[Close]
BLAST of mRNA_M-pyrifera_M_contig100531.116.1 vs. uniprot
Match: A0A5B9QE06_9BACT (NAD-dependent malic enzyme n=1 Tax=Bythopirellula goksoeyrii TaxID=1400387 RepID=A0A5B9QE06_9BACT)

HSP 1 Score: 386 bits (992), Expect = 5.340e-130
Identity = 184/226 (81.42%), Postives = 214/226 (94.69%), Query Frame = 1 
Query:    1 AFCNEPDDLDKHIFLRQLQDENETLFYQLLLIHVKEMMPLVYTPVVGLACQRFSHIYRRARGVFIAYPNRDSMDEILSNVERDIDVIVVTDGERILGLGDQGAGGMGIPIGKLSLYSLCGGIHPSKTLPILLDLGTNNAERLDDPQYIGWRNHRVKGTDYDDFVEQFVQAVIKRFPKVLLQWEDFASVDAERILKKYRDRLCTFNDDIQGTAAVTTGTLLAAVEAA 678
            AF  E  DLDKHIFLR+LQDENETLFY+LLL HV EMMP+VYTP+VG AC+ FSHIYRRARGVF++YP+R+ MD+ILS+V+R+IDVIVVTDGERILGLGDQGAGGMGIPIGKLSLYSLCGGIHP++TLP+LLDLGTNNAER+DDP+YIGWR+ R+KG +YD+F+EQFV+AV+KRFP VLLQWEDFASVDAERILKKYRDRLCTFNDDIQGTAAVT+GT+LAA+++A
Sbjct:   59 AFSAEETDLDKHIFLRELQDENETLFYRLLLEHVAEMMPIVYTPIVGKACEEFSHIYRRARGVFVSYPDRELMDDILSHVDREIDVIVVTDGERILGLGDQGAGGMGIPIGKLSLYSLCGGIHPARTLPMLLDLGTNNAERIDDPRYIGWRHERIKGAEYDNFIEQFVEAVMKRFPNVLLQWEDFASVDAERILKKYRDRLCTFNDDIQGTAAVTSGTILAAIQSA 284
[Close]
BLAST of mRNA_M-pyrifera_M_contig100531.116.1 vs. uniprot
Match: A0A518IJ22_9PLAN (NAD-dependent malic enzyme n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518IJ22_9PLAN)

HSP 1 Score: 378 bits (970), Expect = 1.240e-126
Identity = 182/226 (80.53%), Postives = 203/226 (89.82%), Query Frame = 1 
Query:    1 AFCNEPDDLDKHIFLRQLQDENETLFYQLLLIHVKEMMPLVYTPVVGLACQRFSHIYRRARGVFIAYPNRDSMDEILSNVERDIDVIVVTDGERILGLGDQGAGGMGIPIGKLSLYSLCGGIHPSKTLPILLDLGTNNAERLDDPQYIGWRNHRVKGTDYDDFVEQFVQAVIKRFPKVLLQWEDFASVDAERILKKYRDRLCTFNDDIQGTAAVTTGTLLAAVEAA 678
            AFC+   D+DKHIFLRQLQDENETLFY+LLL H+ EMMP+VYTPVVGLACQRFSHIYRR RG+FI+YP RDSMD I  N+E D+DVIVVTDGERILGLGDQG GGMGIPIGKLSLY+LCGG+ P+KTLPI+LDLGTNN ERLDDP+YIGWR +R+KG +YD F+EQFV AV KRFP VLLQWEDFASVDAERI+ KYRD LCTFNDDIQGTAAVTTGT+LAA+ AA
Sbjct:   62 AFCDFHTDIDKHIFLRQLQDENETLFYRLLLEHITEMMPIVYTPVVGLACQRFSHIYRRPRGIFISYPERDSMDAIFENIEHDVDVIVVTDGERILGLGDQGVGGMGIPIGKLSLYTLCGGVDPAKTLPIVLDLGTNNQERLDDPRYIGWRENRIKGAEYDAFIEQFVTAVKKRFPHVLLQWEDFASVDAERIIDKYRDDLCTFNDDIQGTAAVTTGTILAAITAA 287
[Close]
BLAST of mRNA_M-pyrifera_M_contig100531.116.1 vs. uniprot
Match: A0A517VR08_9PLAN (NAD-dependent malic enzyme n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VR08_9PLAN)

HSP 1 Score: 374 bits (961), Expect = 2.830e-125
Identity = 180/225 (80.00%), Postives = 203/225 (90.22%), Query Frame = 1 
Query:    1 AFCNEPDDLDKHIFLRQLQDENETLFYQLLLIHVKEMMPLVYTPVVGLACQRFSHIYRRARGVFIAYPNRDSMDEILSNVERDIDVIVVTDGERILGLGDQGAGGMGIPIGKLSLYSLCGGIHPSKTLPILLDLGTNNAERLDDPQYIGWRNHRVKGTDYDDFVEQFVQAVIKRFPKVLLQWEDFASVDAERILKKYRDRLCTFNDDIQGTAAVTTGTLLAAVEA 675
            AFC+  D++DKHIFLRQLQDENETLFY+LLL H+ EMMP+VYTPVVGLACQRFSHIYRR RG+FI+YP RDSMD I  NV+RD+DVIVVTDGERILGLGDQG GGMGIPIGKLSLY+LCGG+ P+KTLPI+LDLGTNN ERLDDP+Y+GWR +R+KG +YD F+ QFV AV KRFP VLLQWEDFASVDAERIL +YRD LCTFNDDIQGTAAVTTGT+LAA+ A
Sbjct:   62 AFCDFRDNIDKHIFLRQLQDENETLFYRLLLEHITEMMPIVYTPVVGLACQRFSHIYRRPRGIFISYPERDSMDAIFENVQRDVDVIVVTDGERILGLGDQGVGGMGIPIGKLSLYTLCGGVDPAKTLPIVLDLGTNNQERLDDPRYMGWRENRIKGAEYDAFIGQFVAAVKKRFPNVLLQWEDFASVDAERILDQYRDDLCTFNDDIQGTAAVTTGTILAAIAA 286
[Close]
BLAST of mRNA_M-pyrifera_M_contig100531.116.1 vs. uniprot
Match: A0A517VKL6_9PLAN (NAD-dependent malic enzyme n=8 Tax=Planctomycetaceae TaxID=126 RepID=A0A517VKL6_9PLAN)

HSP 1 Score: 370 bits (949), Expect = 1.840e-123
Identity = 176/225 (78.22%), Postives = 204/225 (90.67%), Query Frame = 1 
Query:    1 AFCNEPDDLDKHIFLRQLQDENETLFYQLLLIHVKEMMPLVYTPVVGLACQRFSHIYRRARGVFIAYPNRDSMDEILSNVERDIDVIVVTDGERILGLGDQGAGGMGIPIGKLSLYSLCGGIHPSKTLPILLDLGTNNAERLDDPQYIGWRNHRVKGTDYDDFVEQFVQAVIKRFPKVLLQWEDFASVDAERILKKYRDRLCTFNDDIQGTAAVTTGTLLAAVEA 675
            AFC+  + ++KHI+LRQLQDENETLFY+L+L H+ EMMP+VYTP+VGLAC+RFSHIYRR RG+FI+YP RDSMD IL NVERDIDVIVVTDGERILGLGDQG GGMGIPIGKLSLY+LCGG+ P+KTLPI+LDLGTNN ERLDDP+YIGWR +R+KG +YD+F++ FV AV KRFP VLLQWEDFASVDAERI+ +YRD LCTFNDDIQGTAAVTTGT+LAA+ A
Sbjct:   62 AFCDFKEPINKHIYLRQLQDENETLFYRLMLGHITEMMPIVYTPIVGLACERFSHIYRRPRGIFISYPERDSMDAILENVERDIDVIVVTDGERILGLGDQGVGGMGIPIGKLSLYTLCGGVAPAKTLPIVLDLGTNNQERLDDPRYIGWRENRIKGEEYDEFIDLFVTAVKKRFPHVLLQWEDFASVDAERIIDRYRDDLCTFNDDIQGTAAVTTGTILAAIAA 286
[Close]
BLAST of mRNA_M-pyrifera_M_contig100531.116.1 vs. uniprot
Match: A0A2D5AZS7_9BACT (NAD-dependent malic enzyme n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5AZS7_9BACT)

HSP 1 Score: 365 bits (938), Expect = 1.130e-121
Identity = 175/225 (77.78%), Postives = 202/225 (89.78%), Query Frame = 1 
Query:    1 AFCNEPDDLDKHIFLRQLQDENETLFYQLLLIHVKEMMPLVYTPVVGLACQRFSHIYRRARGVFIAYPNRDSMDEILSNVERDIDVIVVTDGERILGLGDQGAGGMGIPIGKLSLYSLCGGIHPSKTLPILLDLGTNNAERLDDPQYIGWRNHRVKGTDYDDFVEQFVQAVIKRFPKVLLQWEDFASVDAERILKKYRDRLCTFNDDIQGTAAVTTGTLLAAVEA 675
            A+C EP +L+KHIFLRQLQDENETLFY+LLL H  EMMP++YTPVVG ACQ FS IYRR RGVFIAYP RDS+DEIL NV++D+DVIVVTDG+RILGLGDQGAGGMGIPIGKLSLYSLCGGIHPS+TLPI+LD+GTNN ERL D +YIGWR+ R+ G  YDDF+EQFV+A+++RFP VLLQWEDFASV+A  I+++YRDRLCTFNDDIQGTAAVT GT+LAAV A
Sbjct:   63 AYCGEPSELEKHIFLRQLQDENETLFYRLLLEHTVEMMPIIYTPVVGAACQEFSEIYRRPRGVFIAYPLRDSIDEILQNVKQDVDVIVVTDGQRILGLGDQGAGGMGIPIGKLSLYSLCGGIHPSRTLPIVLDVGTNNQERLADARYIGWRHERIHGNAYDDFIEQFVEAIMRRFPNVLLQWEDFASVNAAPIIERYRDRLCTFNDDIQGTAAVTAGTILAAVAA 287
[Close]
BLAST of mRNA_M-pyrifera_M_contig100531.116.1 vs. uniprot
Match: A0A1Z8NCG8_9PLAN (NAD-dependent malic enzyme n=1 Tax=Planctomycetaceae bacterium TMED10 TaxID=1986833 RepID=A0A1Z8NCG8_9PLAN)

HSP 1 Score: 363 bits (932), Expect = 8.080e-121
Identity = 173/224 (77.23%), Postives = 200/224 (89.29%), Query Frame = 1 
Query:    1 AFCNEPDDLDKHIFLRQLQDENETLFYQLLLIHVKEMMPLVYTPVVGLACQRFSHIYRRARGVFIAYPNRDSMDEILSNVERDIDVIVVTDGERILGLGDQGAGGMGIPIGKLSLYSLCGGIHPSKTLPILLDLGTNNAERLDDPQYIGWRNHRVKGTDYDDFVEQFVQAVIKRFPKVLLQWEDFASVDAERILKKYRDRLCTFNDDIQGTAAVTTGTLLAAVE 672
            AF  +P DL+KHI+LR LQD NETLFY+L+L H+ EMMP+VYTP+VGLACQ+FSHIYRR RG+FI+YP R+ MD IL+NV+ +I+VIVVTDGERILGLGDQGAGGMGIPIGKLSLY+LCGGI P KTLPILLDLGTNN ERL DP YIGWR +R++G +YDDF+EQFVQAV+KRFP VLLQWEDFASVDA  IL +YRDRLCTFNDDIQGTAAV TGT+L+A+E
Sbjct:   61 AFSEQPTDLEKHIYLRNLQDTNETLFYRLMLEHITEMMPIVYTPIVGLACQKFSHIYRRPRGIFISYPEREHMDHILANVDHEIEVIVVTDGERILGLGDQGAGGMGIPIGKLSLYTLCGGIAPEKTLPILLDLGTNNEERLKDPTYIGWRENRIRGKEYDDFIEQFVQAVMKRFPGVLLQWEDFASVDAAPILDRYRDRLCTFNDDIQGTAAVATGTILSALE 284
[Close]
BLAST of mRNA_M-pyrifera_M_contig100531.116.1 vs. uniprot
Match: A0A517ZXV0_9PLAN (NAD-dependent malic enzyme n=4 Tax=Symmachiella TaxID=2795780 RepID=A0A517ZXV0_9PLAN)

HSP 1 Score: 360 bits (924), Expect = 9.140e-120
Identity = 169/225 (75.11%), Postives = 201/225 (89.33%), Query Frame = 1 
Query:    1 AFCNEPDDLDKHIFLRQLQDENETLFYQLLLIHVKEMMPLVYTPVVGLACQRFSHIYRRARGVFIAYPNRDSMDEILSNVERDIDVIVVTDGERILGLGDQGAGGMGIPIGKLSLYSLCGGIHPSKTLPILLDLGTNNAERLDDPQYIGWRNHRVKGTDYDDFVEQFVQAVIKRFPKVLLQWEDFASVDAERILKKYRDRLCTFNDDIQGTAAVTTGTLLAAVEA 675
            AFC +  D++KHI+LRQLQDENETLFY+L+L H++EMMP+VYTPVVG AC++FSHIYRR RG+F++YP R  MD +L N+ +D+DVIVVTDGERILGLGDQGAGGMGIPIGKL+LY+LCGGIHP KTLPILLDLGTNN ERL+DP YIGWR+ R+KG +YD+F+E FV  V +RFP VLLQWEDFASVD+E IL++YRD+LCTFNDDIQGTAAVTTGT+LAAV A
Sbjct:   49 AFCMKQSDIEKHIYLRQLQDENETLFYRLMLDHIEEMMPIVYTPVVGAACEKFSHIYRRPRGIFVSYPERHLMDGVLDNLIQDVDVIVVTDGERILGLGDQGAGGMGIPIGKLALYTLCGGIHPGKTLPILLDLGTNNQERLNDPMYIGWRHERIKGKEYDEFIESFVTTVKRRFPDVLLQWEDFASVDSEPILERYRDQLCTFNDDIQGTAAVTTGTILAAVAA 273
[Close]
BLAST of mRNA_M-pyrifera_M_contig100531.116.1 vs. uniprot
Match: A0A2E3RGN2_9PLAN (NAD-dependent malic enzyme n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E3RGN2_9PLAN)

HSP 1 Score: 358 bits (919), Expect = 7.390e-119
Identity = 168/224 (75.00%), Postives = 198/224 (88.39%), Query Frame = 1 
Query:    1 AFCNEPDDLDKHIFLRQLQDENETLFYQLLLIHVKEMMPLVYTPVVGLACQRFSHIYRRARGVFIAYPNRDSMDEILSNVERDIDVIVVTDGERILGLGDQGAGGMGIPIGKLSLYSLCGGIHPSKTLPILLDLGTNNAERLDDPQYIGWRNHRVKGTDYDDFVEQFVQAVIKRFPKVLLQWEDFASVDAERILKKYRDRLCTFNDDIQGTAAVTTGTLLAAVE 672
            AF  +P DL+KH++LR LQD NETLFY+L+L H+ EMMP++YTP+VGLACQ+FSHIYRR RG+FI+YP R  MD+I SNV+RDI+VIVVTDGERILGLGDQGAGGMGIPIGKLSLY+LCGGI P KTLPIL+DLGTNN ERL DP YIGWR +R++  +YDDF+EQFV+AV++RFP VLLQWEDFAS DA  IL +YRDRLCTFNDDIQGTAAV TGT+L+A+E
Sbjct:   61 AFSGQPTDLEKHVYLRNLQDTNETLFYRLMLDHITEMMPIIYTPIVGLACQKFSHIYRRPRGIFISYPERAHMDQIFSNVDRDIEVIVVTDGERILGLGDQGAGGMGIPIGKLSLYTLCGGIAPEKTLPILIDLGTNNEERLKDPTYIGWRKNRIRDKEYDDFIEQFVEAVMRRFPNVLLQWEDFASADAAPILDRYRDRLCTFNDDIQGTAAVATGTILSALE 284
[Close]
BLAST of mRNA_M-pyrifera_M_contig100531.116.1 vs. uniprot
Match: A9LGS5_9BACT (NAD-dependent malic enzyme n=1 Tax=uncultured planctomycete 6N14 TaxID=455069 RepID=A9LGS5_9BACT)

HSP 1 Score: 345 bits (885), Expect = 1.050e-113
Identity = 163/225 (72.44%), Postives = 195/225 (86.67%), Query Frame = 1 
Query:    1 AFCNEPDDLDKHIFLRQLQDENETLFYQLLLIHVKEMMPLVYTPVVGLACQRFSHIYRRARGVFIAYPNRDSMDEILSNVERDIDVIVVTDGERILGLGDQGAGGMGIPIGKLSLYSLCGGIHPSKTLPILLDLGTNNAERLDDPQYIGWRNHRVKGTDYDDFVEQFVQAVIKRFPKVLLQWEDFASVDAERILKKYRDRLCTFNDDIQGTAAVTTGTLLAAVEA 675
            A+  +  DLDKH+FLRQLQDENETL+Y LL +HV EMMP+VYTPVVGLACQRFSHIYRR RG+F++YP+RDS+ EI++N    +D+IVVTDGERILGLGDQGAGGMGIPIGKLSLYSLCGGIHP +TLP++LDLGT+N + L D QYIGWR+ R+KG  YD F+ +FV+A+  R+P+VLLQWEDFAS DAER+L+ YR+ LCTFNDDIQGTAAVTTG +LAAV A
Sbjct:   69 AYKEQQSDLDKHVFLRQLQDENETLYYCLLSLHVSEMMPIVYTPVVGLACQRFSHIYRRPRGLFLSYPDRDSLQEIMANAPDQVDIIVVTDGERILGLGDQGAGGMGIPIGKLSLYSLCGGIHPRRTLPVMLDLGTDNQDLLSDSQYIGWRHERIKGDQYDAFIAEFVKAIKVRYPRVLLQWEDFASSDAERLLESYRNELCTFNDDIQGTAAVTTGAILAAVAA 293
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100531.116.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A518ADL5_9PLAN4.960e-13081.86NAD-dependent malic enzyme n=9 Tax=Gimesia TaxID=1... [more]
A0A5B9QE06_9BACT5.340e-13081.42NAD-dependent malic enzyme n=1 Tax=Bythopirellula ... [more]
A0A518IJ22_9PLAN1.240e-12680.53NAD-dependent malic enzyme n=2 Tax=Gimesia TaxID=1... [more]
A0A517VR08_9PLAN2.830e-12580.00NAD-dependent malic enzyme n=2 Tax=Gimesia aquarii... [more]
A0A517VKL6_9PLAN1.840e-12378.22NAD-dependent malic enzyme n=8 Tax=Planctomycetace... [more]
A0A2D5AZS7_9BACT1.130e-12177.78NAD-dependent malic enzyme n=1 Tax=Planctomycetes ... [more]
A0A1Z8NCG8_9PLAN8.080e-12177.23NAD-dependent malic enzyme n=1 Tax=Planctomycetace... [more]
A0A517ZXV0_9PLAN9.140e-12075.11NAD-dependent malic enzyme n=4 Tax=Symmachiella Ta... [more]
A0A2E3RGN2_9PLAN7.390e-11975.00NAD-dependent malic enzyme n=1 Tax=Planctomycetace... [more]
A9LGS5_9BACT1.050e-11372.44NAD-dependent malic enzyme n=1 Tax=uncultured plan... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig100531contigM-pyrifera_M_contig100531:2..679 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score375.2
Seed ortholog evalue2.2e-101
Seed eggNOG ortholog344747.PM8797T_14419
Preferred namemaeA
KEGG rclassRC00105
KEGG koko:K00027
KEGG ReactionR00214
KEGG Pathwayko00620,ko01200,ko02020,map00620,map01200,map02020
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004470,GO:0004471,GO:0004473,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006094,GO:0006108,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016051,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0019318,GO:0019319,GO:0019752,GO:0032787,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0055114,GO:0071704,GO:1901576
EggNOG free text desc.Malic enzyme, NAD binding domain
EggNOG OGs2J0KC@203682,COG0281@1,COG0281@2
EC1.1.1.38
COG Functional cat.C
BiGG ReactioniSbBS512_1146.SbBS512_E1742
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons1
Model size678
Cds size678
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815501.8862038-CDS-M-pyrifera_M_contig100531:1..6791622815501.8862038-CDS-M-pyrifera_M_contig100531:1..679Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100531 2..679 +
1692277440.294716-CDS-M-pyrifera_M_contig100531:1..6791692277440.294716-CDS-M-pyrifera_M_contig100531:1..679Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100531 2..679 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig100531.116.1prot_M-pyrifera_M_contig100531.116.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig100531 2..679 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig100531.116.1

>prot_M-pyrifera_M_contig100531.116.1 ID=prot_M-pyrifera_M_contig100531.116.1|Name=mRNA_M-pyrifera_M_contig100531.116.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=226bp
AFCNEPDDLDKHIFLRQLQDENETLFYQLLLIHVKEMMPLVYTPVVGLAC
QRFSHIYRRARGVFIAYPNRDSMDEILSNVERDIDVIVVTDGERILGLGD
QGAGGMGIPIGKLSLYSLCGGIHPSKTLPILLDLGTNNAERLDDPQYIGW
RNHRVKGTDYDDFVEQFVQAVIKRFPKVLLQWEDFASVDAERILKKYRDR
LCTFNDDIQGTAAVTTGTLLAAVEAA
back to top

mRNA from alignment at M-pyrifera_M_contig100531:2..679+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig100531.116.1 ID=mRNA_M-pyrifera_M_contig100531.116.1|Name=mRNA_M-pyrifera_M_contig100531.116.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=678bp|location=Sequence derived from alignment at M-pyrifera_M_contig100531:2..679+ (Macrocystis pyrifera P11B4 male)
GCCTTTTGCAACGAACCCGACGATCTCGACAAACATATCTTTCTGCGACA
ACTACAGGACGAGAACGAGACACTTTTCTATCAGTTGCTGCTGATCCACG
TGAAGGAAATGATGCCGTTGGTCTATACGCCTGTCGTCGGGCTGGCGTGT
CAGAGATTCAGTCACATCTACCGCCGAGCGCGGGGCGTGTTCATCGCGTA
TCCCAATCGCGACTCGATGGACGAGATTCTGTCGAATGTCGAGCGGGACA
TTGACGTCATAGTCGTCACTGACGGCGAACGCATCCTGGGTCTGGGCGAC
CAGGGGGCAGGGGGCATGGGAATCCCGATTGGCAAACTGTCGCTTTATTC
CCTTTGTGGAGGGATCCATCCATCTAAAACGCTACCCATATTGCTCGACC
TGGGCACGAACAACGCAGAGCGGTTAGACGACCCACAGTACATTGGGTGG
CGTAATCACAGGGTCAAGGGAACAGACTATGACGACTTCGTCGAGCAGTT
CGTCCAGGCCGTCATCAAACGTTTCCCCAAGGTTTTGCTTCAATGGGAAG
ACTTCGCGTCTGTCGATGCGGAGCGGATTCTGAAGAAGTATCGCGACCGC
CTATGTACTTTCAATGATGACATTCAAGGCACGGCTGCGGTGACGACGGG
CACGCTTCTGGCAGCCGTCGAGGCTGCT
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig100531:2..679+

>mRNA_M-pyrifera_M_contig100531.116.1 ID=mRNA_M-pyrifera_M_contig100531.116.1|Name=mRNA_M-pyrifera_M_contig100531.116.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1356bp|location=Sequence derived from alignment at M-pyrifera_M_contig100531:2..679+ (Macrocystis pyrifera P11B4 male)
GCCTTTTGCAACGAACCCGACGATCTCGACAAACATATCTTTCTGCGACA
ACTACAGGACGAGAACGAGACACTTTTCTATCAGTTGCTGCTGATCCACG
TGAAGGAAATGATGCCGTTGGTCTATACGCCTGTCGTCGGGCTGGCGTGT
CAGAGATTCAGTCACATCTACCGCCGAGCGCGGGGCGTGTTCATCGCGTA
TCCCAATCGCGACTCGATGGACGAGATTCTGTCGAATGTCGAGCGGGACA
TTGACGTCATAGTCGTCACTGACGGCGAACGCATCCTGGGTCTGGGCGAC
CAGGGGGCAGGGGGCATGGGAATCCCGATTGGCAAACTGTCGCTTTATTC
CCTTTGTGGAGGGATCCATCCATCTAAAACGCTACCCATATTGCTCGACC
TGGGCACGAACAACGCAGAGCGGTTAGACGACCCACAGTACATTGGGTGG
CGTAATCACAGGGTCAAGGGAACAGACTATGACGACTTCGTCGAGCAGTT
CGTCCAGGCCGTCATCAAACGTTTCCCCAAGGTTTTGCTTCAATGGGAAG
ACTTCGCGTCTGTCGATGCGGAGCGGATTCTGAAGAAGTATCGCGACCGC
CTATGTACTTTCAATGATGACATTCAAGGCACGGCTGCGGTGACGACGGG
CACGCTTCTGGCAGCCGTCGAGGCTGCTGCCTTTTGCAACGAACCCGACG
ATCTCGACAAACATATCTTTCTGCGACAACTACAGGACGAGAACGAGACA
CTTTTCTATCAGTTGCTGCTGATCCACGTGAAGGAAATGATGCCGTTGGT
CTATACGCCTGTCGTCGGGCTGGCGTGTCAGAGATTCAGTCACATCTACC
GCCGAGCGCGGGGCGTGTTCATCGCGTATCCCAATCGCGACTCGATGGAC
GAGATTCTGTCGAATGTCGAGCGGGACATTGACGTCATAGTCGTCACTGA
CGGCGAACGCATCCTGGGTCTGGGCGACCAGGGGGCAGGGGGCATGGGAA
TCCCGATTGGCAAACTGTCGCTTTATTCCCTTTGTGGAGGGATCCATCCA
TCTAAAACGCTACCCATATTGCTCGACCTGGGCACGAACAACGCAGAGCG
GTTAGACGACCCACAGTACATTGGGTGGCGTAATCACAGGGTCAAGGGAA
CAGACTATGACGACTTCGTCGAGCAGTTCGTCCAGGCCGTCATCAAACGT
TTCCCCAAGGTTTTGCTTCAATGGGAAGACTTCGCGTCTGTCGATGCGGA
GCGGATTCTGAAGAAGTATCGCGACCGCCTATGTACTTTCAATGATGACA
TTCAAGGCACGGCTGCGGTGACGACGGGCACGCTTCTGGCAGCCGTCGAG
GCTGCT
back to top