mRNA_M-pyrifera_M_contig10052.110.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig10052.110.1
Unique NamemRNA_M-pyrifera_M_contig10052.110.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig10052.110.1 vs. uniprot
Match: A0A6H5K2Q7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2Q7_9PHAE)

HSP 1 Score: 411 bits (1057), Expect = 2.840e-143
Identity = 189/257 (73.54%), Postives = 219/257 (85.21%), Query Frame = 1
Query:    1 VNGSGMALSKAEFEACKVELEALKAEQGLKEPDRSFMDDPDTKWRFGGPPDYTLTNLAFLKGRSKAHPEGSLELTVENLVKTWEMERSHKVDCTQHCTVDQDRFRISGNGGKIFNNEEANTVGNYNVLLEACPPDVWDTEKSTWDQSHDAFHTAFSAFPWEVLEVFSGPPTIGFTWRHWAHFGGTFEENEGEGQLVEMYGFGIATVNADLQLCESSFYFNAKSFIDILRGEKDAQDVQGGTDLVGPLGGLKGGCPHL 771
            VNGSG ALSK E    + EL+ALKAE  LKEP+RSFMDDPDTKWRFG PPDYTL NLAFLKGRSKAHPEGSLEL VENLVKTWEMERSHK+D T+H TVDQ+RF +S NGGK +NN+EAN  GNYNVLLE+CP ++WD+++ TW++SH  FH  F AFPWEVLEVFSGPPT+GFTWRHWA+F G+++ N GEGQLVE+YGFG+ATVN  LQLC+   YF+ KSF++ILRGE+DA DVQGGT +VGPLGGL GGCPHL
Sbjct:   10 VNGSGKALSKEEIATYRAELDALKAEFSLKEPERSFMDDPDTKWRFGCPPDYTLANLAFLKGRSKAHPEGSLELIVENLVKTWEMERSHKLDHTEHRTVDQERFSLSANGGKKYNNKEANAAGNYNVLLESCPKEMWDSDEKTWEESHAVFHGTFDAFPWEVLEVFSGPPTVGFTWRHWANFDGSYQGNAGEGQLVELYGFGVATVNDKLQLCDVDVYFDPKSFMEILRGERDAGDVQGGTAVVGPLGGLNGGCPHL 266          
BLAST of mRNA_M-pyrifera_M_contig10052.110.1 vs. uniprot
Match: A0A7S4DTD8_9EUKA (Hypothetical protein n=2 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DTD8_9EUKA)

HSP 1 Score: 346 bits (887), Expect = 5.660e-117
Identity = 164/257 (63.81%), Postives = 197/257 (76.65%), Query Frame = 1
Query:    1 VNGSGMALSKAEFEACKVELEALKAEQGLKEPDRSFMDDPDTKWRFGGPPDYTLTNLAFLKGRSKAHPEGSLELTVENLVKTWEMERSHKVDCTQHCTVDQDRFRISGNGGKIFNNEEANTVGNYNVLLEACPPDVWDTEKSTWDQSHDAFHTAFSAFPWEVLEVFSGPPTIGFTWRHWAHFGGTFEENEGEGQLVEMYGFGIATVNADLQLCESSFYFNAKSFIDILRGEKDAQDVQGGTDLVGPLGGLKGGCPHL 771
            VNGSG AL+K E E  K +L+ALK E+GLKEP RSFMDD  TKWRFGGPPDY+LTN  +L+ R+K H EGSLE  VENLVKTWEMERSHK+D T+H +VDQ  FRIS NGGKI+NN+EAN VGNYNVLL+ACP  +WD    +W++SHD FHTAF+AFPWEVLEVFS PP + FTWRHW +F GTFE+N+G GQLVEM+GFG ATVN+ LQLC+   ++NA+ FI++LRG K   +V    +         GGCP L
Sbjct:   31 VNGSGKALTKDELEQVKEKLKALKLERGLKEPVRSFMDDTKTKWRFGGPPDYSLTNYLYLQQRTKVHKEGSLEQVVENLVKTWEMERSHKLDYTEHKSVDQKNFRISANGGKIYNNKEANQVGNYNVLLDACPAKLWDKANISWEKSHDMFHTAFAAFPWEVLEVFSPPPKVAFTWRHWGNFTGTFEKNQGNGQLVEMFGFGTATVNSKLQLCDVEIFYNAEEFINVLRGTKKVDEV----NQHWAKAASGGGCPFL 283          
BLAST of mRNA_M-pyrifera_M_contig10052.110.1 vs. uniprot
Match: A0A7S2YSW9_9STRA (Hypothetical protein n=2 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YSW9_9STRA)

HSP 1 Score: 338 bits (866), Expect = 2.040e-113
Identity = 155/237 (65.40%), Postives = 185/237 (78.06%), Query Frame = 1
Query:    1 VNGSGMALSKAEFEACKVELEALKAEQGLKEPDRSFMDDPDTKWRFGGPPDYTLTNLAFLKGRSKAHPEGSLELTVENLVKTWEMERSHKVDCTQHCTVDQDRFRISGNGGKIFNNEEANTVGNYNVLLEACPPDVWDTEKSTWDQSHDAFHTAFSAFPWEVLEVFSGPPTIGFTWRHWAHFGGTFEENEGEGQLVEMYGFGIATVNADLQLCESSFYFNAKSFIDILRGEKDAQDV 711
            VNGSG A++K + E  + EL+ +K E G KEP+RSFMDDPD +WRFGG PDYT+TNL FLK RSK HPEGSLEL VENLVKTWEMERSHK D  QH +VD ++F+I+ NGGK +NN EAN VGNYNVLL++  PDVWD +K TW+ SHD FH  F+AFPWEVLEVFSGPP +GFTWRHW  F G FE N+G+G+LVEM+GFG A VN  LQL +   +FNA+ FID+LRG K   +V
Sbjct:   59 VNGSGQAMTKEQLEEAREELDKIKKEFGFKEPERSFMDDPDIQWRFGGKPDYTVTNLLFLKERSKIHPEGSLELIVENLVKTWEMERSHKTDPNQHQSVDTEKFQITANGGKTYNNIEANKVGNYNVLLDSVAPDVWDNDKITWEDSHDTFHETFAAFPWEVLEVFSGPPKVGFTWRHWGTFTGEFEGNKGQGELVEMFGFGTAVVNDKLQLQDVEIFFNAEEFIDVLRGNKKTTEV 295          
BLAST of mRNA_M-pyrifera_M_contig10052.110.1 vs. uniprot
Match: A0A812USP2_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812USP2_9DINO)

HSP 1 Score: 333 bits (855), Expect = 1.160e-111
Identity = 150/256 (58.59%), Postives = 198/256 (77.34%), Query Frame = 1
Query:    7 GSGMALSKAEFEACKVELEALKAEQGLKEPDRSFMDDPDTKWRFGGPPDYTLTNLAFLKGRSKAHPEGSLELTVENLVKTWEMERSHKVDCTQHCTVDQDRFRISGNGGKIFNNEEANTVGNYNVLLEACPPDVWDTEKSTWDQSHDAFHTAFSAFPWEVLEVFSGPPTIGFTWRHWAHFGGTFEENEGEGQLVEMYGFGIATVNADLQLCESSFYFNAKSFIDILRGEKDAQDVQGGTDLVGPLGGLKGGCPHLA 774
            GSG  L+  E EAC+ ELE +KA+ GLKEP+R+ MD+   KWR+GG PDY+LTNL +LKG++K HPEGSLEL VENLVKTWEMERSHKVD  QH +VD ++F I+ NG K FNN+EAN VGNYNVLL  CP  ++D +  TW+QSHD FH AF+AFPWEVLEVFSGPP + F+WRHW  F GT++ N+G G+LVE++GFG+A+V+  L+L +   ++  + F+++L+G K A+++ GG+DL+GP  G   GCPHL+
Sbjct:   81 GSGKPLTAEELEACREELEEIKAKYGLKEPERAHMDEEGIKWRYGGKPDYSLTNLLYLKGKTKNHPEGSLELIVENLVKTWEMERSHKVDPDQHRSVDPEKFMIAANGWKKFNNKEANEVGNYNVLLAGCPASLYDADSITWEQSHDKFHDAFAAFPWEVLEVFSGPPRVAFSWRHWGEFTGTYDGNKGSGELVELFGFGVASVDDQLRLVDVDIFYKPEIFLEVLKGSKSAEELAGGSDLLGP--GSVAGCPHLS 334          
BLAST of mRNA_M-pyrifera_M_contig10052.110.1 vs. uniprot
Match: A0A267F104_9PLAT (Uncharacterized protein (Fragment) n=5 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267F104_9PLAT)

HSP 1 Score: 331 bits (848), Expect = 3.280e-111
Identity = 151/237 (63.71%), Postives = 183/237 (77.22%), Query Frame = 1
Query:    1 VNGSGMALSKAEFEACKVELEALKAEQGLKEPDRSFMDDPDTKWRFGGPPDYTLTNLAFLKGRSKAHPEGSLELTVENLVKTWEMERSHKVDCTQHCTVDQDRFRISGNGGKIFNNEEANTVGNYNVLLEACPPDVWDTEKSTWDQSHDAFHTAFSAFPWEVLEVFSGPPTIGFTWRHWAHFGGTFEENEGEGQLVEMYGFGIATVNADLQLCESSFYFNAKSFIDILRGEKDAQDV 711
            VNGSG AL++AE +  K +LE +KAE GL+EP RSFM + DT W FGGPPDY+LTN  +LK R+  H  GSLE  VENLVKTWEMERSHK DC QH +VDQ+RF IS NGGK+FNN EAN VGNYNVLL ACP D+WD+E STW+ SH  F  AF+AFPWEVL+V+SGPP + FTWRHW  F GT+EEN+G+G+ VEM+GFG A VN  LQLC+   ++NA+ FI +LRG+K   +V
Sbjct:   41 VNGSGKALTRAELKEVKKDLEKIKAEFGLEEPVRSFMGEEDTSWIFGGPPDYSLTNYLYLKERTHVHKPGSLEQIVENLVKTWEMERSHKADCRQHQSVDQERFAISANGGKVFNNSEANKVGNYNVLLNACPADLWDSENSTWEDSHHKFREAFAAFPWEVLQVYSGPPKVAFTWRHWGTFTGTYEENKGKGEKVEMFGFGTAVVNDKLQLCDVEIFYNAEEFISVLRGQKTVDEV 277          
BLAST of mRNA_M-pyrifera_M_contig10052.110.1 vs. uniprot
Match: A0A812LD63_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812LD63_9DINO)

HSP 1 Score: 330 bits (845), Expect = 5.340e-110
Identity = 153/256 (59.77%), Postives = 193/256 (75.39%), Query Frame = 1
Query:    7 GSGMALSKAEFEACKVELEALKAEQGLKEPDRSFMDDPDTKWRFGGPPDYTLTNLAFLKGRSKAHPEGSLELTVENLVKTWEMERSHKVDCTQHCTVDQDRFRISGNGGKIFNNEEANTVGNYNVLLEACPPDVWDTEKSTWDQSHDAFHTAFSAFPWEVLEVFSGPPTIGFTWRHWAHFGGTFEENEGEGQLVEMYGFGIATVNADLQLCESSFYFNAKSFIDILRGEKDAQDVQGGTDLVGPLGGLKGGCPHLA 774
            GSG  L+  E EAC+ ELE +KA+ GL EP+R+ MD+   KWR+GG PDY+LTNL +LKG++K HPEGSLEL VENLVKTWEMERSHK D  QH +VD ++F IS NG K F+N+EAN VGNYNVLL  CP  V+D E  TW+QSHD FH AF+AFPWEVLEVFSGPP + FTWRHW  F GT++ N+G G+LVEM+GFG+ATV+  L+L +   ++  + F+++LRG K  ++++G  DLVG   G   GCPHLA
Sbjct:   88 GSGKPLTAEELEACREELEEIKAKYGLLEPERAHMDEEGIKWRYGGKPDYSLTNLLYLKGKTKNHPEGSLELIVENLVKTWEMERSHKTDPDQHRSVDPEKFHISANGWKKFDNKEANRVGNYNVLLAGCPAAVYDAENITWEQSHDKFHDAFAAFPWEVLEVFSGPPCVAFTWRHWGEFTGTYDGNKGSGELVEMFGFGVATVDDQLRLVDVDIFYKPEVFLEVLRGNKTPEELKGAQDLVGA--GSVEGCPHLA 341          
BLAST of mRNA_M-pyrifera_M_contig10052.110.1 vs. uniprot
Match: A0A7S4QUJ2_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4QUJ2_9DINO)

HSP 1 Score: 321 bits (823), Expect = 1.040e-107
Identity = 147/259 (56.76%), Postives = 194/259 (74.90%), Query Frame = 1
Query:    1 VNGSGMALSKAEFEACKVELEALKAEQGLKEPDRSFMDDPDTKWRFGGPPDYTLTNLAFLKGRSKAHPEGSLELTVENLVKTWEMERSHKVDCTQHCTVDQDRFRISGNGGKIFNNEEANTVGNYNVLLEACPPDVWDTEKSTWDQSHDAFHTAFSAFPWEVLEVFSGPPTIGFTWRHWAHFGGTFEENEGEGQLVEMYGFGIATVNADLQLCESSFYFNAKSFIDILRGEKDAQDVQGGTDLVGPLGGLKGGCPHLAA 777
            VNGSG A++KAE +A K ELE +KA  GLKEP+R+ MDD    WRFGG PDY+L NL +LKG++K H  GSLEL VENLVKTWEMERSHK++  QH +VD   F  S NGGK F++E+A+ VGNYNVLL  CP  +WD++ +TW+QSH  FH+AF+AFPWE+LE+FS PP + F+WRHW +F G++E N G+G+L+E+YGFGIATVN  LQL +   ++  ++ I++LRGE+ A D+  G D++GP   + G CPH  A
Sbjct:   19 VNGSGQAMTKAELDAAKAELEEIKATSGLKEPERAHMDDEGIHWRFGGKPDYSLVNLLYLKGKTKNHAPGSLELVVENLVKTWEMERSHKLNLRQHQSVDP-AFTFSTNGGKKFSSEQAHAVGNYNVLLSTCPAQLWDSDNTTWEQSHGKFHSAFAAFPWELLELFSKPPRVAFSWRHWGNFTGSYEGNSGKGELIEVYGFGIATVNDRLQLLDVEIFYRPENLIEVLRGERPATDLAQGRDILGPA--VMGACPHAGA 274          
BLAST of mRNA_M-pyrifera_M_contig10052.110.1 vs. uniprot
Match: A0A1Z5KFG3_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KFG3_FISSO)

HSP 1 Score: 308 bits (790), Expect = 9.060e-103
Identity = 147/260 (56.54%), Postives = 186/260 (71.54%), Query Frame = 1
Query:    1 VNGSGMALSKAEFEACKVELEALKAEQGLKEPDRSFMDD-PDTKWRFGGPPDYTLTNLAFLKGRSKAHPEGSLELTVENLVKTWEMERSHKVDCTQHCTVDQDRFRISGNGGKIFNNEEANTVGNYNVLLEACPPDVWDTEKSTWDQSHDAFHTAFSAFPWEVLEVFSGPPTIGFTWRHWAHFGGTFEENEGEGQLVEMYGFGIATVNADLQLCESSFYFNAKSFIDILRGEKDAQDVQGGTDLVGPLGGLKGGCPHLAA 777
            V GSG  L++ E E  KV+L AL  E G KEP R FMD+  D+ WRFGG PDY+LTN  FL  R++ HPEGSLE+TVENLVKTWEMERSHK+D   H +VDQ++FRIS NGGK+F N EAN VGNYNVLL +CP ++++  ++TW+QSHD FH AF+AFPWEVL+V+S PP + FTWRHW  F GT++ NEG+G+ VEM+GF  ATVN  LQLC+   ++N + FI++LRG K   +V              GGCP  +A
Sbjct:   17 VAGSGKPLTREELEEVKVKLAALVEETGAKEPIRMFMDEVEDSNWRFGGKPDYSLTNYKFLSQRTRQHPEGSLEVTVENLVKTWEMERSHKLDPKTHQSVDQEKFRISANGGKVFENVEANEVGNYNVLLNSCPANLYNAAETTWEQSHDKFHEAFAAFPWEVLDVYSPPPKVAFTWRHWGEFTGTYDGNEGKGEYVEMFGFATATVNDKLQLCDVEVFYNPEEFINVLRGAKTTSEVNAAWKT-------GGGCPFSSA 269          
BLAST of mRNA_M-pyrifera_M_contig10052.110.1 vs. uniprot
Match: A0A7S2VF61_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VF61_9STRA)

HSP 1 Score: 291 bits (746), Expect = 7.380e-95
Identity = 135/232 (58.19%), Postives = 166/232 (71.55%), Query Frame = 1
Query:    1 VNGSGMALSKAEFEACKVELEALKAEQGLKEPDRSFMDDPDTKWRFGGPPDYTLTNLAFLKGRSKAHPEGSLELTVENLVKTWEMERSHKVDCTQHCTVDQDRFRISGNGGKIFNNEEANTVGNYNVLLEACPPDVWDTEKSTWDQSHDAFHTAFSAFPWEVLEVFSGPPTIGFTWRHWAHFGGTFEENEGEGQLVEMYGFGIATVNADLQLCESSFYFNAKSFIDILRGEK 696
            VNGSG +L++ E E  K ELE LKA+   KEP R FMDDP T W F G PDY+LTN  FLK R+  H  GSLE TVE LVKTWEMERSHK DC+QHCT + ++FR S NGGK+F+N +A+ VGNYNV+L+ CP + +D E +TW  SH AFH AF AFPWEVL+VFSGPP + FTWRHWAHF G +   +G+GQLVEMYGF  A ++ D+++ E   YF+   F   L G +
Sbjct:   44 VNGSGQSLNEQELEQIKQELEELKAKHAWKEPKRDFMDDPMTVWMFDGVPDYSLTNYFFLKERTHHHAAGSLEETVEELVKTWEMERSHKPDCSQHCTTNPEKFRFSANGGKVFDNVQAHQVGNYNVMLDTCPKEYYDAENTTWQDSHHAFHKAFPAFPWEVLQVFSGPPKVAFTWRHWAHFTGEYNGKQGDGQLVEMYGFCTAELDDDMKMGELQVYFDPVKFFQDLLGTR 275          
BLAST of mRNA_M-pyrifera_M_contig10052.110.1 vs. uniprot
Match: A0A813KV93_POLGL (Hypothetical protein n=7 Tax=Polarella glacialis TaxID=89957 RepID=A0A813KV93_POLGL)

HSP 1 Score: 279 bits (714), Expect = 4.940e-91
Identity = 132/250 (52.80%), Postives = 175/250 (70.00%), Query Frame = 1
Query:   22 LSKAEFEACKVELEALKAEQGLKEPDRSFMDDPDTKWRFGGPPDYTLTNLAFLKGRSKAHPEGSLELTVENLVKTWEMERSHKVDCTQHCTVDQDRFRISGNGGKIFNNEEANTVGNYNVLLEACPPDVWDTEKSTWDQSHDAFHTAFSAFPWEVLEVFSGPPTIGFTWRHWAHFGGTFEENEGEGQLVEMYGFGIATVNADLQLCESSFYFNAKSFIDILRGEKDAQDVQGGTDLVGP---LGGLKGGC 762
            L+  +    K E + LK ++G++ P RS MDD +  WRFG PPDY L NLA+L G++  H EGSLE  VE+LVKTWE ERSHK+D  QH TVDQ++F I  +G K+FNN EAN VGNYNVLLE   PD+W   +S W  +H     AFSAFPWE+L+VFSGPPT+ F+WRHWAHF GT++ N+GEGQLVEM+GF  ATV+  LQL E + Y+  + ++++++G++ + D+ G   L GP   + GL G C
Sbjct:   28 LTATQLAEVKKEFQELKQKEGMRVPVRSHMDDEEYDWRFGAPPDYDLANLAYLSGKTMQHAEGSLEQVVEDLVKTWEFERSHKLDAAQHKTVDQEKFMIGHDGKKMFNNIEANQVGNYNVLLEGVAPDLWAPGQS-WHDTHQNLKDAFSAFPWEILKVFSGPPTVAFSWRHWAHFTGTYKGNKGEGQLVEMFGFATATVSDTLQLQEVNVYYKPEEWLEVMQGKRPSSDMSGAKSLFGPCCPVTGLAGDC 276          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10052.110.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K2Q7_9PHAE2.840e-14373.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S4DTD8_9EUKA5.660e-11763.81Hypothetical protein n=2 Tax=Lotharella globosa Ta... [more]
A0A7S2YSW9_9STRA2.040e-11365.40Hypothetical protein n=2 Tax=Amphiprora paludosa T... [more]
A0A812USP2_9DINO1.160e-11158.59Hypothetical protein n=1 Tax=Symbiodinium natans T... [more]
A0A267F104_9PLAT3.280e-11163.71Uncharacterized protein (Fragment) n=5 Tax=Macrost... [more]
A0A812LD63_9DINO5.340e-11059.77Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP... [more]
A0A7S4QUJ2_9DINO1.040e-10756.76Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
A0A1Z5KFG3_FISSO9.060e-10356.54Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S2VF61_9STRA7.380e-9558.19Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A813KV93_POLGL4.940e-9152.80Hypothetical protein n=7 Tax=Polarella glacialis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig10052contigM-pyrifera_M_contig10052:9582..10358 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score236.9
Seed ortholog evalue1e-59
Seed eggNOG ortholog7739.XP_002611467.1
Hectar predicted targeting categoryother localisation
EggNOG OGs28MRV@1,2QUA2@2759,39UWM@33154,3BQV0@33208,3DCWW@33213
Best tax levelBilateria
Best eggNOG OGNA|NA|NA
Exons1
Model size777
Cds size762
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815501.616955-CDS-M-pyrifera_M_contig10052:9581..103431622815501.616955-CDS-M-pyrifera_M_contig10052:9581..10343Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10052 9582..10343 -
1692277440.1177506-CDS-M-pyrifera_M_contig10052:9581..103431692277440.1177506-CDS-M-pyrifera_M_contig10052:9581..10343Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10052 9582..10343 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815501.6326323-UTR-M-pyrifera_M_contig10052:10343..103581622815501.6326323-UTR-M-pyrifera_M_contig10052:10343..10358Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig10052 10344..10358 -
1692277440.1308787-UTR-M-pyrifera_M_contig10052:10343..103581692277440.1308787-UTR-M-pyrifera_M_contig10052:10343..10358Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig10052 10344..10358 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig10052.110.1prot_M-pyrifera_M_contig10052.110.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig10052 9582..10343 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig10052.110.1

>prot_M-pyrifera_M_contig10052.110.1 ID=prot_M-pyrifera_M_contig10052.110.1|Name=mRNA_M-pyrifera_M_contig10052.110.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=254bp
MALSKAEFEACKVELEALKAEQGLKEPDRSFMDDPDTKWRFGGPPDYTLT
NLAFLKGRSKAHPEGSLELTVENLVKTWEMERSHKVDCTQHCTVDQDRFR
ISGNGGKIFNNEEANTVGNYNVLLEACPPDVWDTEKSTWDQSHDAFHTAF
SAFPWEVLEVFSGPPTIGFTWRHWAHFGGTFEENEGEGQLVEMYGFGIAT
VNADLQLCESSFYFNAKSFIDILRGEKDAQDVQGGTDLVGPLGGLKGGCP
HLAA
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mRNA from alignment at M-pyrifera_M_contig10052:9582..10358-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig10052.110.1 ID=mRNA_M-pyrifera_M_contig10052.110.1|Name=mRNA_M-pyrifera_M_contig10052.110.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=777bp|location=Sequence derived from alignment at M-pyrifera_M_contig10052:9582..10358- (Macrocystis pyrifera P11B4 male)
GTGAATGGTTCCGGCATGGCACTCTCCAAGGCAGAGTTTGAAGCCTGCAA GGTGGAGCTTGAAGCGCTGAAGGCAGAGCAAGGCCTCAAAGAACCTGACC GATCCTTCATGGACGACCCGGACACAAAGTGGCGTTTCGGTGGTCCTCCG GACTACACGCTCACCAACCTAGCGTTCTTAAAGGGGCGATCGAAAGCACA CCCGGAAGGATCGTTGGAGTTGACGGTTGAGAACCTCGTCAAGACGTGGG AGATGGAACGTTCCCACAAGGTGGACTGCACTCAGCACTGCACCGTGGAC CAGGACCGCTTTCGTATTTCGGGCAACGGTGGCAAGATCTTCAACAACGA AGAAGCCAACACTGTGGGTAACTATAACGTGCTGCTCGAAGCATGCCCCC CAGACGTTTGGGACACGGAAAAATCGACTTGGGACCAGTCCCACGACGCG TTCCACACGGCATTTTCTGCTTTTCCGTGGGAGGTGCTTGAGGTTTTTTC CGGACCGCCCACGATTGGGTTCACGTGGCGCCACTGGGCCCACTTCGGTG GCACATTCGAGGAGAATGAGGGCGAGGGCCAGCTTGTCGAGATGTACGGT TTTGGCATCGCAACCGTGAATGCGGACCTCCAGCTATGCGAATCTAGTTT TTACTTTAACGCTAAAAGTTTCATCGACATCCTGCGGGGCGAAAAAGACG CCCAGGATGTTCAAGGCGGAACGGATCTCGTCGGTCCGCTTGGAGGGTTA AAGGGAGGCTGTCCTCATCTGGCGGCC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig10052:9582..10358-

>mRNA_M-pyrifera_M_contig10052.110.1 ID=mRNA_M-pyrifera_M_contig10052.110.1|Name=mRNA_M-pyrifera_M_contig10052.110.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1524bp|location=Sequence derived from alignment at M-pyrifera_M_contig10052:9582..10358- (Macrocystis pyrifera P11B4 male)
ATGGCACTCTCCAAGGCAGAGTTTGAAGCCTGCAAGGTGGAGCTTGAAGC
GCTGAAGGCAGAGCAAGGCCTCAAAGAACCTGACCGATCCTTCATGGACG
ACCCGGACACAAAGTGGCGTTTCGGTGGTCCTCCGGACTACACGCTCACC
AACCTAGCGTTCTTAAAGGGGCGATCGAAAGCACACCCGGAAGGATCGTT
GGAGTTGACGGTTGAGAACCTCGTCAAGACGTGGGAGATGGAACGTTCCC
ACAAGGTGGACTGCACTCAGCACTGCACCGTGGACCAGGACCGCTTTCGT
ATTTCGGGCAACGGTGGCAAGATCTTCAACAACGAAGAAGCCAACACTGT
GGGTAACTATAACGTGCTGCTCGAAGCATGCCCCCCAGACGTTTGGGACA
CGGAAAAATCGACTTGGGACCAGTCCCACGACGCGTTCCACACGGCATTT
TCTGCTTTTCCGTGGGAGGTGCTTGAGGTTTTTTCCGGACCGCCCACGAT
TGGGTTCACGTGGCGCCACTGGGCCCACTTCGGTGGCACATTCGAGGAGA
ATGAGGGCGAGGGCCAGCTTGTCGAGATGTACGGTTTTGGCATCGCAACC
GTGAATGCGGACCTCCAGCTATGCGAATCTAGTTTTTACTTTAACGCTAA
AAGTTTCATCGACATCCTGCGGGGCGAAAAAGACGCCCAGGATGTTCAAG
GCGGAACGGATCTCGTCGGTCCGCTTGGAGGGTTAAAGGGAGGCTGTCCT
CATCTGGCGGCCATGGCACTCTCCAAGGCAGAGTTTGAAGCCTGCAAGGT
GGAGCTTGAAGCGCTGAAGGCAGAGCAAGGCCTCAAAGAACCTGACCGAT
CCTTCATGGACGACCCGGACACAAAGTGGCGTTTCGGTGGTCCTCCGGAC
TACACGCTCACCAACCTAGCGTTCTTAAAGGGGCGATCGAAAGCACACCC
GGAAGGATCGTTGGAGTTGACGGTTGAGAACCTCGTCAAGACGTGGGAGA
TGGAACGTTCCCACAAGGTGGACTGCACTCAGCACTGCACCGTGGACCAG
GACCGCTTTCGTATTTCGGGCAACGGTGGCAAGATCTTCAACAACGAAGA
AGCCAACACTGTGGGTAACTATAACGTGCTGCTCGAAGCATGCCCCCCAG
ACGTTTGGGACACGGAAAAATCGACTTGGGACCAGTCCCACGACGCGTTC
CACACGGCATTTTCTGCTTTTCCGTGGGAGGTGCTTGAGGTTTTTTCCGG
ACCGCCCACGATTGGGTTCACGTGGCGCCACTGGGCCCACTTCGGTGGCA
CATTCGAGGAGAATGAGGGCGAGGGCCAGCTTGTCGAGATGTACGGTTTT
GGCATCGCAACCGTGAATGCGGACCTCCAGCTATGCGAATCTAGTTTTTA
CTTTAACGCTAAAAGTTTCATCGACATCCTGCGGGGCGAAAAAGACGCCC
AGGATGTTCAAGGCGGAACGGATCTCGTCGGTCCGCTTGGAGGGTTAAAG
GGAGGCTGTCCTCATCTGGCGGCC
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