mRNA_M-pyrifera_M_contig100232.57.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig100232.57.1 vs. uniprot
Match: A0A2E7K622_9PLAN (Sialidase domain-containing protein n=10 Tax=Gimesia TaxID=1649453 RepID=A0A2E7K622_9PLAN) HSP 1 Score: 487 bits (1253), Expect = 1.110e-169 Identity = 223/227 (98.24%), Postives = 227/227 (100.00%), Query Frame = 1 Query: 1 SDDDGKTWSDLKFVINPDGDGPRRASDPCFWLDPSGKLWLFWWMNGGDLNVTMSITTENPDAENPTWTKPRALFPGVMINKPIVTKNGEWLMPAAIWHQDDSDRVMVSKDQGRTWALRGAANVPKDRRNCDEPMLVERKDGSLWLLVRTAGHGIGEAVSTDGGRTWTEVKDHLQQTTSRFHIQRLASGNLLMIKHNGIDERARGRNHLTAYLSDDDGKSWKGGLLLD 681 SDDDGKTWSDLKFVINPDGDGPRRASDPCFWLDPSGKLWLFWW+NGGDLNVTMSITTENPDAENPTWTKPRALFPGVMINKPIVTKNGEWLMPAAIWHQDDSDRVMVSKDQGRTWALRGAANVPKDRRNCDEPMLVERKDGSLWLLVRT+GHGIGEAVSTDGGRTWTEVKDHLQQTTSRFHIQRLASGNLL+IKHNG+DERARGRNHLTAYLSDDDGKSWKGGLLLD Sbjct: 93 SDDDGKTWSDLKFVINPDGDGPRRASDPCFWLDPSGKLWLFWWINGGDLNVTMSITTENPDAENPTWTKPRALFPGVMINKPIVTKNGEWLMPAAIWHQDDSDRVMVSKDQGRTWALRGAANVPKDRRNCDEPMLVERKDGSLWLLVRTSGHGIGEAVSTDGGRTWTEVKDHLQQTTSRFHIQRLASGNLLLIKHNGVDERARGRNHLTAYLSDDDGKSWKGGLLLD 319
BLAST of mRNA_M-pyrifera_M_contig100232.57.1 vs. uniprot
Match: A6CA70_9PLAN (Sialidase domain-containing protein n=7 Tax=Planctomycetaceae TaxID=126 RepID=A6CA70_9PLAN) HSP 1 Score: 456 bits (1174), Expect = 1.080e-157 Identity = 209/227 (92.07%), Postives = 219/227 (96.48%), Query Frame = 1 Query: 1 SDDDGKTWSDLKFVINPDGDGPRRASDPCFWLDPSGKLWLFWWMNGGDLNVTMSITTENPDAENPTWTKPRALFPGVMINKPIVTKNGEWLMPAAIWHQDDSDRVMVSKDQGRTWALRGAANVPKDRRNCDEPMLVERKDGSLWLLVRTAGHGIGEAVSTDGGRTWTEVKDHLQQTTSRFHIQRLASGNLLMIKHNGIDERARGRNHLTAYLSDDDGKSWKGGLLLD 681 SDDDG TWSDLKFVINPDGDGPRRASDPCFWLDPSGKLWLFWWMNGG LNVTMSITTENPDAENP WT+PRALFPGVMINKPIVTKNGEWLMPAAIW QDDS RVMVSKDQGRTWALRGAANVPKDRRNCDEPMLVER+DGS+WLLVRT+ +GIG++VSTD GR+WTEVKDHLQQTTSRFHIQRLASGNLL+IKHNGIDER+RGRNHLTAYLS DDGKSWKGGLLLD Sbjct: 93 SDDDGNTWSDLKFVINPDGDGPRRASDPCFWLDPSGKLWLFWWMNGGGLNVTMSITTENPDAENPNWTEPRALFPGVMINKPIVTKNGEWLMPAAIWRQDDSCRVMVSKDQGRTWALRGAANVPKDRRNCDEPMLVERQDGSVWLLVRTSSYGIGDSVSTDAGRSWTEVKDHLQQTTSRFHIQRLASGNLLLIKHNGIDERSRGRNHLTAYLSADDGKSWKGGLLLD 319
BLAST of mRNA_M-pyrifera_M_contig100232.57.1 vs. uniprot
Match: A0A517VB19_9PLAN (Sialidase domain-containing protein n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517VB19_9PLAN) HSP 1 Score: 446 bits (1148), Expect = 9.450e-154 Identity = 205/227 (90.31%), Postives = 216/227 (95.15%), Query Frame = 1 Query: 1 SDDDGKTWSDLKFVINPDGDGPRRASDPCFWLDPSGKLWLFWWMNGGDLNVTMSITTENPDAENPTWTKPRALFPGVMINKPIVTKNGEWLMPAAIWHQDDSDRVMVSKDQGRTWALRGAANVPKDRRNCDEPMLVERKDGSLWLLVRTAGHGIGEAVSTDGGRTWTEVKDHLQQTTSRFHIQRLASGNLLMIKHNGIDERARGRNHLTAYLSDDDGKSWKGGLLLD 681 S DDGKTWSDLKFVINPDGDGPRRASDPCFWLDPSGKLWLFWWMNGG LNVTMSITTENPDAE PTWT+PRALFPGVMINKPIVT++GEWLMPAAIW QD S RVMVS DQGRTWALRGAANVP DRRNCDEPMLVER+DGSLWLLVRT G+GIG++VSTDGGRTWTEVKDHLQQTTSRF+++RLASGNLL+IKHNGIDER RGRNHLTAYLS DDGKSWKGGLLLD Sbjct: 93 SGDDGKTWSDLKFVINPDGDGPRRASDPCFWLDPSGKLWLFWWMNGGGLNVTMSITTENPDAEKPTWTEPRALFPGVMINKPIVTRDGEWLMPAAIWKQDKSCRVMVSPDQGRTWALRGAANVPPDRRNCDEPMLVERQDGSLWLLVRTTGYGIGDSVSTDGGRTWTEVKDHLQQTTSRFYLRRLASGNLLLIKHNGIDERGRGRNHLTAYLSADDGKSWKGGLLLD 319
BLAST of mRNA_M-pyrifera_M_contig100232.57.1 vs. uniprot
Match: A0A1G1A739_9BACT (Sialidase domain-containing protein n=1 Tax=Lentisphaerae bacterium RIFOXYA12_FULL_48_11 TaxID=1798578 RepID=A0A1G1A739_9BACT) HSP 1 Score: 357 bits (915), Expect = 4.920e-116 Identity = 156/227 (68.72%), Postives = 195/227 (85.90%), Query Frame = 1 Query: 1 SDDDGKTWSDLKFVINPDGDGPRRASDPCFWLDPSGKLWLFWWMNGGDLNVTMSITTENPDAENPTWTKPRALFPGVMINKPIVTKNGEWLMPAAIWHQDDSDRVMVSKDQGRTWALRGAANVPKDRRNCDEPMLVERKDGSLWLLVRTAGHGIGEAVSTDGGRTWTEVKDHLQQTTSRFHIQRLASGNLLMIKHNGIDERARGRNHLTAYLSDDDGKSWKGGLLLD 681 S DDGKTWSDLK I+PDGDGPRR SDPC WLDPSG+LWLFWW++GG L TM+IT ENPD+ENP WT+P+ALF GVM+NKP+V KNG+WLMPAAIW +DDS +VM+S+D+G++++L G AN+P+ RRNCDE M+VERKDG+L +LVRTA +GIG ++STDGGRTWT V D+L TSRFH +RL+SGNLL++KH +D+R GR+HLTAYLS+D G+SWKGGLL+D Sbjct: 95 SGDDGKTWSDLKLAIDPDGDGPRRNSDPCLWLDPSGRLWLFWWLDGGGLTTTMAITAENPDSENPVWTEPQALFHGVMLNKPVVLKNGDWLMPAAIWGRDDSSKVMISRDRGKSFSLLGTANIPQARRNCDEHMIVERKDGTLMMLVRTAEYGIGRSLSTDGGRTWTAVADYLPDATSRFHFRRLSSGNLLLVKHGPLDKRI-GRSHLTAYLSEDGGESWKGGLLVD 320
BLAST of mRNA_M-pyrifera_M_contig100232.57.1 vs. uniprot
Match: A0A2M7KM94_9BACT (Exo-alpha-sialidase n=1 Tax=Armatimonadetes bacterium CG_4_8_14_3_um_filter_66_20 TaxID=1973912 RepID=A0A2M7KM94_9BACT) HSP 1 Score: 315 bits (806), Expect = 1.700e-102 Identity = 145/229 (63.32%), Postives = 178/229 (77.73%), Query Frame = 1 Query: 1 SDDDGKTWSDLKFVINPDGDGPRRASDPCFWLDPSGKLWLFWWMNGGDLNVTMSITTENPDAENPTWTKPRALFPGVMINKPIVTKNGEWLMPAAIWHQDDSDRVMVSKDQGRTWALRGAANVPKDR-RNCDEPMLVERKDGSLWLLVRTAGHGIGEAVSTDGGRTWTEVKDH-LQQTTSRFHIQRLASGNLLMIKHNGIDERARGRNHLTAYLSDDDGKSWKGGLLLD 681 S+DDGKTWSDLKFVI+PDGDGP R SDPC WLDP+G+LWLFWWMNG ++TT +PD+ENPTWT+PR + PGVM+ KPIVT +G WL+ AIWHQD S RV+ S D G+TW LRG A +P + RNCDEPM+VERKDGSLW+LVRT +GIGE VS D GRTWT V + T SRF I+RL SGNLL++KH +D++ GR+HL A++S DDG +W+GGL+LD Sbjct: 57 SNDDGKTWSDLKFVIDPDGDGPLRTSDPCPWLDPAGRLWLFWWMNGAGDTQLWAMTTADPDSENPTWTEPRVVCPGVMMCKPIVTSDGSWLLATAIWHQDGSCRVVASADSGQTWELRGTATIPDPKDRNCDEPMMVERKDGSLWMLVRTT-YGIGETVSRDKGRTWTPVTPSGIPHTASRFFIRRLLSGNLLLVKHGSLDQQT-GRSHLMAFVSPDDGATWQGGLMLD 283
BLAST of mRNA_M-pyrifera_M_contig100232.57.1 vs. uniprot
Match: UPI0013DA59F7 (glycoside hydrolase n=1 Tax=Candidatus Laterigemmans baculatus TaxID=2770505 RepID=UPI0013DA59F7) HSP 1 Score: 295 bits (754), Expect = 4.270e-96 Identity = 143/232 (61.64%), Postives = 173/232 (74.57%), Query Frame = 1 Query: 1 SDDDGKTWSDLKFVINPDGDGPRRASDPCFWLDPSGKLWLFWWM---NGGDLNVTMSITTENPDAENPTWTKPRALFPGVMINKPIVTKNGEWLMPAAIWHQDDSDRVMVSKDQGRTWALRGAANVPKDR-RNCDEPMLVERKDGSLWLLVRTAGHGIGEAVSTDGGRTWTEVK-DHLQQTTSRFHIQRLASGNLLMIKHNGIDERARGRNHLTAYLSDDDGKSWKGGLLLD 681 SDD+GKTWS VI+PD DGP RA DPC W+DPSG+LWLFW GG T +ITTENPD P W+ PR + GVM+ KP TK+G WL+P AIW++++S RV+ S DQG+TW LRG AN+P + RNCDEPM+VERKDGSLW LVRT +GIGE+VSTD G+TW+ V + +RF I+RL SGNLL++KH +DER GR+HLTAYLSDDDGKSWKGGLLLD Sbjct: 95 SDDNGKTWSAPTLVIDPDRDGPVRAFDPCPWIDPSGRLWLFWAQATKGGGGDPFTFAITTENPDDAEPRWSAPRRIHDGVMMCKPTATKDGSWLLPTAIWYRENSCRVIASTDQGKTWRLRGTANIPDPKDRNCDEPMIVERKDGSLWQLVRTR-YGIGESVSTDDGKTWSPVTPSDIAHPAARFFIRRLRSGNLLLVKHGPLDERT-GRSHLTAYLSDDDGKSWKGGLLLD 324
BLAST of mRNA_M-pyrifera_M_contig100232.57.1 vs. uniprot
Match: A3ZY44_9BACT (Sialidase domain-containing protein n=2 Tax=Blastopirellula marina TaxID=124 RepID=A3ZY44_9BACT) HSP 1 Score: 285 bits (728), Expect = 1.150e-90 Identity = 141/234 (60.26%), Postives = 177/234 (75.64%), Query Frame = 1 Query: 1 SDDDGKTWSDLKFVINPDGDGPRRASDPCFWLDPSGKLWLFWWM----NGGDLNVTMSITTENPDAENPTWTKPRALFPGVMINKPIVTKNGEWLMPAAIWHQDDSDRVMVSKDQGRTWALRGAANVP--KDRRNCDEPMLVERKDGSLWLLVRTAGHGIGEAVSTDGGRTWTEVKD-HLQQTTSRFHIQRLASGNLLMIKHNGIDERARGRNHLTAYLSDDDGKSWKGGLLLD 681 SDD+GKTWS+ K VI+PD +GP RA DPC W+DPSGKLWLFW GGD + T ++TTENPD P W+ P+ + GVM+ KP NG+WL+P AIW +D S RV+ S DQG+TW+LRG ANVP KDR NCDEPM+V+RK+G LW LVRT+ +GIGE+ STDGG+TWT V +++ T SRF I+RL SGNLL++KH + E+ GR+HLTAYLS DDG+SW+GGLLLD Sbjct: 69 SDDEGKTWSENKVVIDPDKEGPVRAFDPCPWVDPSGKLWLFWCQATRGGGGDPH-TFAMTTENPDDAQPKWSAPQLVHNGVMMCKPTALANGDWLLPTAIWGRDHSCRVVASTDQGKTWSLRGTANVPAAKDR-NCDEPMIVQRKNGELWQLVRTS-YGIGESHSTDGGKTWTAVTPWNIRHTASRFFIRRLQSGNLLLVKHGPLHEKT-GRSHLTAYLSKDDGQSWEGGLLLD 298
BLAST of mRNA_M-pyrifera_M_contig100232.57.1 vs. uniprot
Match: A0A432MDD4_9BACT (Exo-alpha-sialidase n=2 Tax=Tautonia sociabilis TaxID=2080755 RepID=A0A432MDD4_9BACT) HSP 1 Score: 263 bits (672), Expect = 7.200e-80 Identity = 125/232 (53.88%), Postives = 167/232 (71.98%), Query Frame = 1 Query: 1 SDDDGKTWSDLKFVINPDGDGPRRASDPCFWLDPSGKLWLFWWMNGG---DLNVTMSITTENPDAENPTWTKPRALFPGVMINKPIVTKNGEWLMPAAIWHQDD-SDRVMVSKDQGRTWALRGAANVPKDRRNCDEPMLVERKDGSLWLLVRTAGHGIGEAVSTDGGRTWTEVKD-HLQQTTSRFHIQRLASGNLLMIKHNGIDERARGRNHLTAYLSDDDGKSWKGGLLLD 681 S DDG++WS + VI+PDGDGP RA DP WLDP G+LW FW G + +I T++PDAE+P+W+ PR L GVM+ KP V +GEW +PA+ W + D S R++VS D G TW +RG NVP++ R DE ++VER+DGSLW+L RT +GIGE+ STD GR+WTE+ + ++RF ++RLASGNLL++KH +D++ GR+HLTAYLSDDDG+SW GGLLLD Sbjct: 471 SGDDGRSWSGERVVIDPDGDGPVRAFDPQLWLDPDGRLWAFWAQTIGHSASVGGVWAIVTDDPDAEHPSWSPPRRLTDGVMMGKPTVLSSGEWCLPASTWRETDHSARIVVSTDAGETWQVRGGCNVPREDRAFDEHLIVERRDGSLWMLARTR-YGIGESSSTDRGRSWTELAPTSIAHPSARFFLRRLASGNLLLVKHGPLDQQT-GRSHLTAYLSDDDGRSWSGGLLLD 700
BLAST of mRNA_M-pyrifera_M_contig100232.57.1 vs. uniprot
Match: A0A517Y960_9BACT (BNR/Asp-box repeat protein n=1 Tax=Anatilimnocola aggregata TaxID=2528021 RepID=A0A517Y960_9BACT) HSP 1 Score: 248 bits (634), Expect = 4.560e-78 Identity = 124/232 (53.45%), Postives = 162/232 (69.83%), Query Frame = 1 Query: 1 SDDDGKTWSDLKFVINPDGDGPRRASDPCFWLDPSGKLWLFWWMNGG---DLNVTMSITTENPDAENPTWTKPRALFPGVMINKPIVTKNGEWLMPAAIWHQDDSDRVMVSKDQGRTWALRGAANVPKDR-RNCDEPMLVERKDGSLWLLVRTAGHGIGEAVSTDGGRTWTEVKD-HLQQTTSRFHIQRLASGNLLMIKHNGIDERARGRNHLTAYLSDDDGKSWKGGLLLD 681 SDDDG++WSD K ++ P + RA P W+DP +LWLFW + G + +I T+ PDAENP W+ PR L G+M+NKP V KNG+WL+ ++IW DDS RV S DQG T+ALRG+ANVP R DEPM+VERKDG+LW++VR G+ E +S DGG+TWT V+ ++ TSRF ++RL +G LL++KH +DERA GR L A+LSDDDGKSW+GGLLLD Sbjct: 88 SDDDGQSWSDFKLMVLPQKN--VRAMSPAIWIDPQQRLWLFWGQSFGLQDNRFGIFAIVTDEPDAENPKWSAPRRLGDGIMLNKPTVLKNGDWLLTSSIWKADDSIRVYASTDQGATFALRGSANVPDPATRGPDEPMIVERKDGTLWMMVRM--QGLAETISRDGGKTWTPVERIAIKHCTSRFFLRRLQTGALLLVKHGPLDERA-GREKLMAFLSDDDGKSWQGGLLLD 314
BLAST of mRNA_M-pyrifera_M_contig100232.57.1 vs. uniprot
Match: A0A2E8HBJ8_9BACT (Sialidase domain-containing protein n=1 Tax=Gemmatimonadaceae bacterium TaxID=2026741 RepID=A0A2E8HBJ8_9BACT) HSP 1 Score: 247 bits (631), Expect = 7.870e-78 Identity = 122/233 (52.36%), Postives = 157/233 (67.38%), Query Frame = 1 Query: 1 SDDDGKTWSDLKFVINPDGDGPRRASDPCFWLDPSGKLWLFWWMNGGDLNV-----TMSITTENPDAENPTWTKPRALFPGVMINKPIVTKNGEWLMPAAIWHQDDSDRVMVSKDQGRTWALRGAANVPKDRRNCDEPMLVERKDGSLWLLVRTAGHGIGEAVSTDGGRTWTEVKDH-LQQTTSRFHIQRLASGNLLMIKHNGIDERARGRNHLTAYLSDDDGKSWKGGLLLD 681 SDDDG TWS +++PDGDGP RA DPC W DP G+LWL W G + + +ITT + D E P+W+ PR L G+M+NKP+V +G WL+ AA W + S V S D G +W GAA+VP++ R+CDE MLVER DGS W+LVRT +GIGE+ STDGG +W+ V+ L +RF I+RLAS LL++KH + +R R+HLTAYLSDDDG SW+GGLLLD Sbjct: 77 SDDDGDTWSSPCLIVDPDGDGPTRAYDPCLWHDPGGRLWLLW-AQGYEKHADAAAGVWAITTTDSDDERPSWSTPRRLCDGIMMNKPVVASSGRWLIAAARWRTEGSCVVFGSDDDGASWQRLGAASVPEEHRSCDEHMLVERLDGSQWMLVRTT-YGIGESTSTDGGHSWSPVQPTALAHPVTRFFIRRLASTRLLLVKHGPLAKRTE-RSHLTAYLSDDDGLSWQGGLLLD 306 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100232.57.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig100232.57.1 >prot_M-pyrifera_M_contig100232.57.1 ID=prot_M-pyrifera_M_contig100232.57.1|Name=mRNA_M-pyrifera_M_contig100232.57.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=227bp SDDDGKTWSDLKFVINPDGDGPRRASDPCFWLDPSGKLWLFWWMNGGDLNback to top mRNA from alignment at M-pyrifera_M_contig100232:2..682+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig100232.57.1 ID=mRNA_M-pyrifera_M_contig100232.57.1|Name=mRNA_M-pyrifera_M_contig100232.57.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=681bp|location=Sequence derived from alignment at M-pyrifera_M_contig100232:2..682+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig100232:2..682+ >mRNA_M-pyrifera_M_contig100232.57.1 ID=mRNA_M-pyrifera_M_contig100232.57.1|Name=mRNA_M-pyrifera_M_contig100232.57.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1362bp|location=Sequence derived from alignment at M-pyrifera_M_contig100232:2..682+ (Macrocystis pyrifera P11B4 male)back to top |