mRNA_M-pyrifera_M_contig10.2.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig10.2.1
Unique NamemRNA_M-pyrifera_M_contig10.2.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig10.2.1 vs. uniprot
Match: D7FRF8_ECTSI (DLH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRF8_ECTSI)

HSP 1 Score: 308 bits (788), Expect = 1.750e-103
Identity = 145/223 (65.02%), Postives = 172/223 (77.13%), Query Frame = 1 
Query:    1 SCCAAGPPVVCDYTPKGTVSKIGDMDTYFIGSGPKCIVVVYDIFGFSTQAKQASQHSILIQVCDKFAATGFNVAMPDFFQGKQWLIKNWPPTDK-RFSTWISTVGDWDTATLPKFTDTVAHMKEHKGAELFGMAGFCWGGMVSMKAAALGTDAE--LMATACCHPAMLTPELAEKVTVPMLIMPAGDDPDHTPLKEVLDTKPFGDKCEYRRFDDMHHGFCSAR 660
            +CCAAGPPV CDYTPKGT+SKIGD+DTYF+GSGPK +VVVYDIFGFS Q KQ         VCD FAA GFNVAMPDF +G  W ++N+PP D+     W  T G W+T+  P F   VAHMKEH+GAE+ G+ GFCWGGM++MKAA+L  DAE  + A    HPAML+ ELA+ V VP+LIMP+G+DPDH P+KEVLD KPFGDKC+YRRFDDMHHGFC+AR
Sbjct:    5 ACCAAGPPVACDYTPKGTISKIGDVDTYFVGSGPKALVVVYDIFGFSPQLKQ---------VCDMFAAAGFNVAMPDFCKGNPWPLENFPPKDRSELGAWFGTTGKWETSIRPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDPDAEGGVKAGGTVHPAMLSAELAQDVKVPVLIMPSGEDPDHLPVKEVLDKKPFGDKCQYRRFDDMHHGFCAAR 218
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BLAST of mRNA_M-pyrifera_M_contig10.2.1 vs. uniprot
Match: A0A507BTB7_9FUNG (DLH domain-containing protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507BTB7_9FUNG)

HSP 1 Score: 155 bits (392), Expect = 1.540e-43
Identity = 84/220 (38.18%), Postives = 122/220 (55.45%), Query Frame = 1 
Query:    7 CAAGPPVVCDYTPKGTVSKIGDMDT--YFIGSGPKCIVVVYDIFGFSTQAKQASQHSILIQVCDKFAATGFNVAMPDFFQGKQWLIKNWPPTDKRFSTWISTVGDWDTATLPKFTDTVAHMKEHKGAELFGMAGFCWGGMVSMKAAALGTDAELMATACCHPAMLTPELAEKVTVPMLIMPAGDDPDHTPLKEVLDTKPFGDKCEYRRFDDMHHGFCSAR 660
            C   PP   DY P G+  ++ + D   Y +GS  K I V YD+ G +   KQ           D  A+ GF   MPDF++G  W  +N      +   W+S VG WD   + +   T+  + + +G E +G  GFCWGG ++M A+ L     +  T   HPA +T E AEK T P+L++P+  + D TP+ +VL+TKP+G+K ++ RFDDMHHG+CSAR
Sbjct:    9 CGTLPPFQTDYKPVGSTKQVPNSDLIYYDVGSSKKVIFVAYDVMGMNDNTKQT---------VDTLASKGFRCVMPDFYRGDGWKPEN---DRSQLMAWVSKVGTWD--IVSRDLTTLKPILDSEGTESYGFVGFCWGGKMAMHASTLSW---MKGTCATHPAWITEEDAEKSTCPVLLLPSNGEADMTPVYKVLETKPWGNKSQHVRFDDMHHGWCSAR 211
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BLAST of mRNA_M-pyrifera_M_contig10.2.1 vs. uniprot
Match: A0A261XW89_9FUNG (DLH domain-containing protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261XW89_9FUNG)

HSP 1 Score: 149 bits (375), Expect = 5.320e-41
Identity = 83/223 (37.22%), Postives = 123/223 (55.16%), Query Frame = 1 
Query:    1 SCCAAGPPVVCDYTPKGTVSKIGDMDTYFIGS--GPKCIVVVYDIFGFSTQAKQASQHSILIQVCDKFAATG-FNVAMPDFFQGKQWLIKNWPPTDKRFSTWISTVGDWDTATLPKFTDTVAHMKEHKGAELFGMAGFCWGGMVSMKAAALGTDAELMATACCHPAMLTPELAEKVTVPMLIMPAGDDPDHTPLKEVLDTKPFGDKCEYRRFDDMHHGFCSAR 660
            +CC+  PPV  +Y   GTV ++GDMD Y +GS    + I+V+YD++GF    KQ          CD+ A  G   VAMPDFF+GK WL  N     +    W++ VG  +   +P   + V  M + +G    G+ GFCWG  ++++A   G   +  A A  HP+ ++ + A+    P++++   D+PD T   E L  KPFG KC + RF+DMHHGF +AR
Sbjct:    8 ACCSI-PPVDSNYKAVGTVKRLGDMDVYMVGSTTSNRAIIVLYDVYGFHKNTKQ---------FCDRLAEAGNVQVAMPDFFRGKPWLASN-AGNREALVKWVTQVGTREKC-MPDL-NAVKSMLQKQGVNQIGLVGFCWGAKIAVQAT--GESKDYAAAALIHPSFISIDDAKSAQAPVMVLATKDEPDMTEYMEQLYAKPFGSKCTFTRFEDMHHGFAAAR 215
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BLAST of mRNA_M-pyrifera_M_contig10.2.1 vs. uniprot
Match: A0A0G4EF01_VITBC (DLH domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EF01_VITBC)

HSP 1 Score: 146 bits (368), Expect = 5.200e-40
Identity = 86/211 (40.76%), Postives = 114/211 (54.03%), Query Frame = 1 
Query:   34 DYTPKGTVSKIGDMDTYFIGSGPKCIVVVYDIFGFSTQAKQASQHSILIQVCDKFAATGFNVAMPDFFQGKQWLIKNWPPTDK-RFSTWISTVGDWDTATLPKFTDTVAHMKEHKGAELFGMAGFCWGGMVSMKAAALGTDAELMATACCHPAMLTPELAEKVTVPMLIMPAGDDPDHTPL-KEVLDTKPFGDKCEYRRFDDMHHGFCSAR 660
            DY   GTV K+G++D YF G G   +VV  DIFG          H+   +VCD+ A  G  VAMPD+F+GK W  + +PP D+  F  WI T   W+   + K T  V  + + +G E  G  GFCWGG +    AA   D ++ A A  HP+  T EL + V  PM  +P+ D+ D   L K VL   P G    ++RFDDMHHG+ SAR
Sbjct:   15 DYKSVGTVEKVGELDVYFTGQGKAGVVVFSDIFG---------DHNNTRRVCDRLADAGMLVAMPDYFRGKPWPAEKFPPPDRDEFMAWIGTF-PWE--QINKETQPVVSLLKARGVEKIGCVGFCWGGKMIAHMAA---DPQISAVATAHPSFWTHELLQGVKCPMCALPSKDEADDETLGKSVLAAGPCGKDLVWQRFDDMHHGWVSAR 210
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BLAST of mRNA_M-pyrifera_M_contig10.2.1 vs. uniprot
Match: F2U1G5_SALR5 (DLH domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U1G5_SALR5)

HSP 1 Score: 144 bits (362), Expect = 4.840e-39
Identity = 86/225 (38.22%), Postives = 122/225 (54.22%), Query Frame = 1 
Query:    4 CCAAGPPVVCDYTPKGTVSKIGDMDTYFIG---SGPKCIVVVYDIFGFSTQAKQASQHSILIQVCDKFAATGFNVAMPDFFQGKQWLIKNWPPTDK-RFSTWISTVGDWDTATLPKFTDTV-AHMKE-HKGAELFGMAGFCWGGMVSMKAAALGTDAELMATACCHPAMLTPELAEKVTVPMLIMPAGDDPDHTPLKEVLDTKPFGDKCEYRRFDDMHHGFCSAR 660
            CC AGPPV   +  KG   K+G++  Y  G   S    +++ YDIFG         +H  + ++CD+FAA G+ V MPD F+G  W ++ +PP DK  F  ++    D      P   +TV AH KE   G +  G+ GFCWGG   ++A A   D    A    HPA +T ++ +KV  P++  PAG D D  P  E L  +P+G K + +RF+DM HGFC+AR
Sbjct:    6 CCDAGPPVTIKHEDKGKEIKLGELTAYVSGDPASAKAGVILFYDIFGL--------KHPQVREICDRFAARGYYVVMPDVFRGDPWTLEKFPPKDKTEFQAFLKRSND----AAPGDIETVKAHFKEVGLGDKKHGVLGFCWGGKWVVEACA---DESFGAGLAAHPAFITLDMVKKVHCPIVFCPAGGDVDCAPFVEHLKKQPWGAKSQEKRFEDMTHGFCAAR 215
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BLAST of mRNA_M-pyrifera_M_contig10.2.1 vs. uniprot
Match: A0A0L0HMK7_SPIPD (DLH domain-containing protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HMK7_SPIPD)

HSP 1 Score: 144 bits (363), Expect = 6.460e-39
Identity = 87/240 (36.25%), Postives = 124/240 (51.67%), Query Frame = 1 
Query:    1 SCCAAGPPVVCDYTPKGTVSKIGDMDTYFIGS-GPKCIVVVYDIFGFSTQAKQASQHSILIQVCDKFAATGFNVAMPDFFQGKQWLIKNWPPTDKRFSTWISTVGDWDTATLPKFTDTVAHMKEH-------------------KGAELFGMAGFCWGGMVSMKAAALGTDAELMATACCHPAMLTPELAEKVTVPMLIMPAGDDPDHTPLKEVLDTKPFGDKCEYRRFDDMHHGFCSAR 660
            +CC   PP   +Y PKG VS +GD+ TYF+G  G + I+++YDIFGF         H    Q  D+ AA GF VA PDF++G  W ++  P                    LP+    +AH+++H                    GAE  G  GFCWG + +++A     +  + A+A  HP+ LT E+ + V  P+ ++P+ D+PD  PL E L  KPF DK  + RFDDMHHG+C+AR
Sbjct:   31 ACCEL-PPFASNYQPKGQVSTVGDLPTYFVGEKGKRAIILIYDIFGF---------HPNTHQFADELAAKGFFVAEPDFYRGNPWPLEKVP------------------IQLPEL---MAHLEQHVPESRMLADIGSVCRYLRSNGAESIGTLGFCWGAIYAIRA---NVEGLVDASAAAHPSRLTVEIVKDVKGPLALLPSKDEPDLIPLMEALKEKPFVDKNVHVRFDDMHHGWCAAR 236
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BLAST of mRNA_M-pyrifera_M_contig10.2.1 vs. uniprot
Match: A0A7S0GPE4_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0GPE4_9EUKA)

HSP 1 Score: 144 bits (362), Expect = 9.590e-39
Identity = 84/236 (35.59%), Postives = 120/236 (50.85%), Query Frame = 1 
Query:    1 SCCAAGPPVVCDYTPKGTVSKI----GDMDTYFIGSGP-----KCIVVVYDIFGFSTQAKQASQHSILIQVCDKFAATGFNVAMPDFFQGKQWLIKNWPPTD----KRFSTWISTVGDWDTATLPKFTDTVAHMKEH-KGAEL--FGMAGFCWGGMVSMKAAALGTDAELMATACCHPAMLTPELAEKVTVPMLIMPAGDDPDHTPLKEVLDTKPFGDKCEYRRFDDMHHGFCSAR 660
            +CC AGPPV  DY  +GT  K+     +   Y  GS        CI++VYDIFG++ + +       + +V D  A  GF V MPDF++G+ W +  +PP +    K F  W     D  T         +  ++   KG ++   G+ GFCWGG++    A L       A    H A LTPE+AEK+  P +++P+ DDP +  +K+VLD K FG  C Y  F    HGFC+AR
Sbjct:   10 ACCGAGPPVEADYKERGTYEKLRARNSEFRAYISGSVKPSKRVNCIILVYDIFGWNKKNRN------VFKVADYLADNGFFVVMPDFYRGEPWSLDRFPPKEAKDKKDFGEWWGKKCDLKTTDADIKQAVIPFIRRFSKGVKMASIGLLGFCWGGLMCFGCAGLDKAFTYSAIGTIHGARLTPEMAEKIRCPAMVLPSKDDPGYEEIKKVLDKKKFGKHCVYHNFKGEIHGFCAAR 239
[Close]
BLAST of mRNA_M-pyrifera_M_contig10.2.1 vs. uniprot
Match: A0A261XVA5_9FUNG (DLH domain-containing protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261XVA5_9FUNG)

HSP 1 Score: 142 bits (359), Expect = 1.220e-38
Identity = 89/223 (39.91%), Postives = 122/223 (54.71%), Query Frame = 1 
Query:    1 SCCAAGPPVVCDYTPKGTVSKIGDMDTYFIG-SGPK-CIVVVYDIFGFSTQAKQASQHSILIQVCDKFAA-TGFNVAMPDFFQGKQWLIKNWPPTDKRFSTWISTVGDWDTATLPKFTDTVAHMKEHKGAELFGMAGFCWGGMVSMKAAALGTDAELMATACCHPAMLTPELAEKVTVPMLIMPAGDDPDHTPLKEVLDTKPFGDKCEYRRFDDMHHGFCSAR 660
            S C   PPV  DY+PKG + +I DMD Y +G  G K  I+V+YDIFGF    KQ +         D+ A  +  NV MPDFF+GK +  ++    +K  S W+ + G      +P        +++  GA   G+ GFCWG  ++ +A A   D+   A A  HP+    E AEK   PML++P  D+PD T     L  KPFGDKC++ RFDD+HHGF +AR
Sbjct:    2 SACCTIPPVKSDYSPKGEIFQIEDMDVYTVGPKGTKTAILVIYDIFGFHPNTKQFA---------DRLAEHSKVNVIMPDFFRGKPFTEQDLADKEKLMS-WVQSAGSIK-GMMPDLAKCKNFLQQD-GAVSAGVVGFCWGAKIASQATA--EDSFWGAAALIHPSFPAKEDAEKAGGPMLVIPTKDEPDMTEYMNALKAKPFGDKCKHERFDDVHHGFAAAR 210
[Close]
BLAST of mRNA_M-pyrifera_M_contig10.2.1 vs. uniprot
Match: A0A4U7KRM3_9BASI (DLH domain-containing protein n=2 Tax=Sporisorium TaxID=63265 RepID=A0A4U7KRM3_9BASI)

HSP 1 Score: 141 bits (356), Expect = 4.610e-38
Identity = 91/229 (39.74%), Postives = 128/229 (55.90%), Query Frame = 1 
Query:    1 SCCAAGPPVVCDYTPKGTVSKIGDMDTYFIG--SGPKCIVVVYDIFGFSTQAKQASQHSILIQVCDKFA-ATGFNVAMPDFFQGKQWLIKNWPP-TDKR---FSTWISTVGDWDTATLPKFTDTVAHMKEHKGAELFGMAGFCWGGMVSMKAAALGTDAELMATACCHPAMLTPELAEKVTVPMLIMPAGDDPDHT--PLKEVLDTKPFGDKCEYRRFDDMHHGFCSAR 660
            +CC   PPV  DY+PKGT+ KIG +D+Y +G     K IVVVYDIFGF    KQ +         D  A AT   V MPDFF+GK +  + +PP TD++   F  +    GD+  A  P   + VA   +  GA   G++G+CWGG +++ A   GT  +  + A  HPAM+ P+ AEK+TVP+   P+ D+P       +EV+  KPF     Y+ + D HHG+ +AR
Sbjct:    8 ACCTI-PPVKSDYSPKGTIEKIGGLDSYVVGPKDAKKAIVVVYDIFGFHNATKQGA---------DLLADATKARVVMPDFFRGKPYPQEQYPPNTDEKKAAFQNFFGNAGDFS-ARKPDL-EAVAEELKKDGAAKLGVSGYCWGGKLAVLAGGEGT--KFTSVAQVHPAMVDPKDAEKLTVPIASFPSKDEPKEQVDKFQEVVQQKPFAKDSVYKLYPDSHHGWAAAR 222
[Close]
BLAST of mRNA_M-pyrifera_M_contig10.2.1 vs. uniprot
Match: A0A4S2LFZ4_OPIFE (DLH domain-containing protein n=1 Tax=Opisthorchis felineus TaxID=147828 RepID=A0A4S2LFZ4_OPIFE)

HSP 1 Score: 142 bits (358), Expect = 7.220e-38
Identity = 94/239 (39.33%), Postives = 128/239 (53.56%), Query Frame = 1 
Query:    4 CCAAGPPVVC----DYTPKGTVSKI--GDMDTYFIG--SGPKC----IVVVYDIFGFSTQAKQASQHSILIQVCDKFAATGFNVAMPDFFQGKQWLIKNWPPTDK-RFSTWISTVGDWD--TATLPKFTDTVAHMKEHKGAELFGMAGFCWGGMVSMKAAALGTDA-----ELMATACCHPAMLTPELAEKVTVPMLIMPAGDDPDHTPLKEVLDTKPFGDKCEYRRFDDMHHGFCSAR 660
            CC++G P       DY+P G + ++       Y+     GP C    ++VVYDIFG      Q  + + L+        T   V MPDFF+G+ WL+KN+PP D   F  W+ T G WD  +A L    + +     +  A L G+ GFCWGG  +++A +  + A     + +A    H A L PE AE +TVPML MPAGDDPD  P+K +LD KPFG +C Y RFD   HGF +AR
Sbjct:   37 CCSSGTPSATGGCGDYSPVGKLVQLTASGPAAYYTRPKEGPLCNSSALIVVYDIFGIDIL--QTRRFADLLA-----ERTHRRVVMPDFFRGRPWLLKNFPPKDGGEFVKWVETAGSWDVVSADLKSAHEFLLADGLNSSAPL-GIIGFCWGGKQAVRACSGDSHARELGFKFLAGVSLHGAFLGPEDAEDLTVPMLFMPAGDDPDVGPIKVILDKKPFGAQCAYHRFDSETHGFAAAR 267
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRF8_ECTSI1.750e-10365.02DLH domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A507BTB7_9FUNG1.540e-4338.18DLH domain-containing protein n=1 Tax=Synchytrium ... [more]
A0A261XW89_9FUNG5.320e-4137.22DLH domain-containing protein n=1 Tax=Bifiguratus ... [more]
A0A0G4EF01_VITBC5.200e-4040.76DLH domain-containing protein n=1 Tax=Vitrella bra... [more]
F2U1G5_SALR54.840e-3938.22DLH domain-containing protein n=1 Tax=Salpingoeca ... [more]
A0A0L0HMK7_SPIPD6.460e-3936.25DLH domain-containing protein n=2 Tax=Spizellomyce... [more]
A0A7S0GPE4_9EUKA9.590e-3935.59Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A261XVA5_9FUNG1.220e-3839.91DLH domain-containing protein n=1 Tax=Bifiguratus ... [more]
A0A4U7KRM3_9BASI4.610e-3839.74DLH domain-containing protein n=2 Tax=Sporisorium ... [more]
A0A4S2LFZ4_OPIFE7.220e-3839.33DLH domain-containing protein n=1 Tax=Opisthorchis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig10contigM-pyrifera_M_contig10:1796..7136 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score312.0
Seed ortholog evalue2.2e-82
Seed eggNOG ortholog2880.D7FRF8
KEGG rclassRC01018,RC01906,RC01907,RC02441,RC02467,RC02468,RC02674,RC02675,RC02686
KEGG koko:K01061,ko:K14515,ko:K18272
KEGG ReactionR03893,R05510,R05511,R06835,R06838,R08120,R08121,R09136,R09220,R09222
KEGG Pathwayko00361,ko00364,ko00623,ko01100,ko01110,ko01120,ko01130,ko04016,ko04075,map00361,map00364,map00623,map01100,map01110,map01120,map01130,map04016,map04075
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Dienelactone hydrolase family
EggNOG OGsCOG0412@1,KOG3043@2759
Ec32 ortholog descriptionAlpha/Beta hydrolase fold
Ec32 orthologEc-08_000790.1
EC3.1.1.45
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04121,ko04147
Exons5
Model size663
Cds size663
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig10.2.1prot_M-pyrifera_M_contig10.2.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig10 1796..7136 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815493.9663732-CDS-M-pyrifera_M_contig10:1795..18861622815493.9663732-CDS-M-pyrifera_M_contig10:1795..1886Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10 1796..1886 +
1692277436.1748264-CDS-M-pyrifera_M_contig10:1795..18861692277436.1748264-CDS-M-pyrifera_M_contig10:1795..1886Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10 1796..1886 +
1622815493.9902368-CDS-M-pyrifera_M_contig10:2901..29901622815493.9902368-CDS-M-pyrifera_M_contig10:2901..2990Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10 2902..2990 +
1692277436.2239199-CDS-M-pyrifera_M_contig10:2901..29901692277436.2239199-CDS-M-pyrifera_M_contig10:2901..2990Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10 2902..2990 +
1622815494.0032876-CDS-M-pyrifera_M_contig10:5070..51751622815494.0032876-CDS-M-pyrifera_M_contig10:5070..5175Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10 5071..5175 +
1692277436.2668712-CDS-M-pyrifera_M_contig10:5070..51751692277436.2668712-CDS-M-pyrifera_M_contig10:5070..5175Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10 5071..5175 +
1622815494.0215287-CDS-M-pyrifera_M_contig10:5844..60751622815494.0215287-CDS-M-pyrifera_M_contig10:5844..6075Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10 5845..6075 +
1692277436.2942264-CDS-M-pyrifera_M_contig10:5844..60751692277436.2942264-CDS-M-pyrifera_M_contig10:5844..6075Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10 5845..6075 +
1622815494.0374806-CDS-M-pyrifera_M_contig10:6989..71361622815494.0374806-CDS-M-pyrifera_M_contig10:6989..7136Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10 6990..7136 +
1692277436.3209238-CDS-M-pyrifera_M_contig10:6989..71361692277436.3209238-CDS-M-pyrifera_M_contig10:6989..7136Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10 6990..7136 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig10.2.1

>prot_M-pyrifera_M_contig10.2.1 ID=prot_M-pyrifera_M_contig10.2.1|Name=mRNA_M-pyrifera_M_contig10.2.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=221bp
SCCAAGPPVVCDYTPKGTVSKIGDMDTYFIGSGPKCIVVVYDIFGFSTQA
KQASQHSILIQVCDKFAATGFNVAMPDFFQGKQWLIKNWPPTDKRFSTWI
STVGDWDTATLPKFTDTVAHMKEHKGAELFGMAGFCWGGMVSMKAAALGT
DAELMATACCHPAMLTPELAEKVTVPMLIMPAGDDPDHTPLKEVLDTKPF
GDKCEYRRFDDMHHGFCSAR*
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mRNA from alignment at M-pyrifera_M_contig10:1796..7136+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig10.2.1 ID=mRNA_M-pyrifera_M_contig10.2.1|Name=mRNA_M-pyrifera_M_contig10.2.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=5341bp|location=Sequence derived from alignment at M-pyrifera_M_contig10:1796..7136+ (Macrocystis pyrifera P11B4 male)
TCGTGTTGTGCGGCAGGTCCTCCTGTGGTGTGCGACTACACCCCCAAGGG
CACCGTCTCCAAGATCGGCGATATGGACACCTACTTCATCGGTCAGTACG
ATCTAATGCTATGTAGGAGTCACTCGCTGACGTTTCCCGACGTAAAACTG
CCAGCGTTCTCCCTACTTGTCGATCGGTGACCTCCAGGATAACGACACAG
ACGGTCTCTCGCCTATCCGAACCATCTACTAAACTCTGAAGGCCCGTCTC
CTTCTGTCTCTCGTGTGGAAGACTACCAAAGTCCTCTTCGTACGATAGTG
GCGTCGTCGGCTGTATTTGATGTTCAGTATTTAGACAACTACTACAGCGA
CAAGTGAAACTGAAAAAAACCGGGCTAGCTGCGATGAGCAGGAAACTACG
CGAAGAACTTCGGGAGCTGCTGTACTGAAGTTAGTGTAGAATGCGCCGTT
GTGCAGATCAGAAATCGATCTGTCCAGCCTGGACAAGCATTCCTGTTTTT
TATTTCCACTCTGTCCGGAAATGTAAGGACTTACTTAGCCCTTTTAGAGC
TGCAGTCCTGTTCTGGGGACAAACCAGTCAAATTCCAAGTAGTTTGTCCC
CAAAACTGGGACTGCAGTTCTAAAGGGGTTAAACCGCCCTTATATTTCCG
GACAGAGTGGATACTTGGTGTCTTGTTCTGTTGTGAGTATATCCTCCAGA
ACCACATACCTGTGGTACAGTGATACAGGACATGCTCCTGATGCCGTATT
ACAATAAATACTACCAAAGAAAGCCGGGATTTACGGGGAACATTAGGAGA
TCCGACGTGGTCATCTTTAAGTGAGGGTAGAAGGCATCCCTTCCCGAGTA
AAGACTCCAGGCTGGGCCAGCATTCCATCTTCCCTACAGTAATAACTGTT
TTATAAATAGCGTTTTAGGCCCGACCCCTTCCACCCCAATGGCAGAGGGA
CCACCTGGAAAAACAGCCTGGGGCCTTGATGAGGGAAATGGAGGTAAGGG
TAGGGGTAGGTTTAGGGTGATATCGCTATTTCCCAACTTGGAGGAATTCG
AAATGCCGTCCTGTAATTTGAATGTTTTGCTTTTTTGTTTGCCGTGGTGA
CCTCAGGTTCTGGTCCGAAGTGTATCGTGGTCGTCTACGATATCTTCGGC
TTCAGCACACAAGCCAAGCAGGCAAGTCAGCACTCTATTTTGATAGTGCT
CTATATGAATGTAATACTGTAGTAATATACTCTCGGCCTTTCATAGACTT
TTGCTAGACTGTCGTCGATATAGGATTGTCAAGGGAAGGAGGGGTAAGGA
AGGGCCTTCAAGAAGAGAACGTGAGGTACTAGTTAACTCGGAGTGACAGG
AGAGATATTACTGCGGTGTTGAAGGGCATTCGATTTTTATTGGACTGGGA
CATGAACGATACGTTCTCAAAGGTCAAAAGGTATCATAGGAAACACTGTT
TAATACCAGGTAGGCGCGTTACACCTCTTTGAGCTAAACAGCTGTTGCAC
ATCAATAATATCAATGGCGATACTACATCAGCAGTAGTGTTAATAATAAC
AGGAGCTGCGGTCGCTAAACGTATTGGCAATCACATCAAAGGGGGCGTAG
TAACCAGTCTGGGGTTCGCTACTGCCTGATTGGGTGGTTTTTTGCTCAGA
GGCCACGGGGCAGAGGGGAGTCTGTAACTATTGCCAAACCCTTAAGACTA
AGCAGCAGCTGCGGAATACAGTACAGGACGCCTATTACTACTAAGAACCA
GGAATGCTGGCCCAGGCTGGATTTTCTTAATTGGGAATGAGTTTGAGAAT
TAGTTTCATTCTACAATATCTCCAGTACACCAATTTCACAATTCATTATC
CTTCCTTGAGAATACAGTATCAGCCTAACTTTCTTATTGTTTGTCCTCTT
AGTAGTATGTCCTACACTGTAACGGTAACCGATCAGGTTTTCGCTCCACA
TGGACGGCTTTCACTCCGGTGCTAAGGGGTGAACGCTTTTGTCTTTCGTA
TTTATCTCTTGTGTGCAAAGCTCCCAGCTCCACCTTCGATTTTTTTGTAG
CCGAAACGAGGGTGCAGTTCTGGAGGGGTTGACCTTCACCAGGATACATG
GTACACTATGTATTCATATTGCCTCGGTAGGTTGTTGCCTGTACGTAGTC
CTGAAAAAACTCGTTATCCTTGCGTTATAGCAAAACAGAGTGTTGCCCCC
ATCCCGTTTATCATTTTCGCCCTTCCTGTTCGTGCCCCCTCCTATTAATA
GTGGCATATTAGATCCGAGGCCACTACGTAGGCTCTTTGTCCCCTTTACG
GCACGTGCCTTACAAGGCATTTTTATCGCGAGGAGAGTTCGGCACTTCCT
TCCCTCGTCGACTGTCCCTGTCCACGGTACAATGAGCGCTCTATACAGTA
AGTGTCATTAGAAAATAAAAGAAGTCCACACGGAGACTCGAACCATCGAC
CTCAATTTCAGGAGTATTCGAGGTTATCACCCACTATTGCGGGGGACCAT
AGTAAATAGGACCTACGGTACACACCAAAACCTATACATTTGCCTATTTT
TACTAACAATATTTGGTCCTATTTACTATGGTCCCCCGTAATAGACCACT
GGAGCGACCTAGCAGGTACCAGGTATTATTTACCGAGTATCTGTACTGTA
CGTATAATATACCTGGTAGGTCTCAGCTTGGGCGTGATGCACCGCGTTAC
TATTGATGCTACCGGACTTGAGAAAAATCTTAGAATGTTCTTCCACCAAC
GGATCAAACGATCCAGTACAGTAGTTCCTGGACGCAATCGATTCCAAGGG
GATAGGTTCACTATTTCGTTTACCGTAGTGTATACCACTTAGCCCAGCTT
CGACAGCACTGTTGATATGAATGCTCCGCACTAATTCTTACAAGGGTCTT
TCTAAGAAGTTCCCACGCGATCAGGGTGGGAGTTGGGTTTTTTGAACGGT
TTAGAGTCACCTGTATTCCAACGTTCTCCTCCATTATCCGACGGCATCCG
TCGTTGACGTCAAATAGACAGCATAGTTATTAATAGTAGTATTGCGATAA
CATGTGTCAGGTATGTTGCTGCTATGTACTGTACGCGGTAGTTGAGAACC
CGGTAGACTGGTGCCGCCAATGCCATGATACGCGACAGAGTTCGTAGAAC
TGACTTGTGACATGAATTCGTTGATACCTGGTAGTTGGGCACCCCCTTGA
CTGCGGTTTTTATGATTTCCGCTTGGCGCCGTGTGCCGTGTGCCGTGTGC
CGCATTTGTCGTGTGGCCGTCGGAGCAGGTCTGCGACAAGTTTGCGGCTA
CGGGTTTCAACGTGGCGATGCCGGACTTCTTCCAGGGGAAGCAATGGCTC
ATCAAAAACTGGCCCCCGACAGACAAGCGAGTCTTACTTACTCTTGCCGT
TGAACTCCTTGAAGCATCACTTGCTTATTCTGTAACGCAGAACAGCGTAC
ATTCCTAGAACCCTTTTATAACGAGGGAGGGGGGGGGGGGTCTGTTCGGC
TGGCCGGGATGACCAGTGCCGTTTGATCGCCGAACCGGAACTCCACAAGG
ATGGTCCTGATTAAAAAAAAACAGCACCGGGGTGGCTGGTATCAACATTC
ATTGTAATATATTTCCTCTCACGGCTACATTTTTTTTTGTCATCGCCCTT
TCTTTCCAGCTCAACTGGTATTGTACTAACGTTAATGTAGGAGGTTTTCA
CCCTCAGCGGCATAATGGTTGAAAAATCAGTAGCCATGGTCACAGGCTTC
TCCCCTTCTCTCTCCCCCCACGGTACTTGCACTCATTTTTTTCGCTCCCA
GCGTCCAGCAGCCCACTGATTGTTGATGACCGCCAAAAATTGTGGGGTAC
CTTCCGGGACACTCCTCCCCCCCCCCCCCGCCCCCAACATGTGTGGTCAA
TGGTAAAATTACTAAGGTAAGGAACTAATGAGTACGCCCAGCCCCCACCA
ACTATCCCCCCCCCCCCCCCGTCCCCCCCACCACCCACTCGGCGCACCAC
CACCGCCACCGCTACCGCCATCACCACCGCCACCACCACAAGGAGCGAGT
TTTCCACGTGGATCAGCACTGTGGGCGACTGGGACACCGCGACCCTCCCC
AAGTTCACCGACACTGTCGCCCACATGAAAGAGCACAAGGGAGCCGAACT
CTTTGGGATGGCAGGGTTCTGCTGGGGGGGGATGGTCTCCATGAAGGCGG
CCGCTTTGGGTACCGATGCCGAGCTTATGGCGACCGCCTGTTGCCACCCC
GCGATGCTCACCCCCGAGCTAGCGGAGAAGGTGAATTCCTGATTCGAAAA
GGGTATGTAGTAAGCTGGCTATTGTGTTTGTAATTTTCGTCGTTGCTCCT
GTTGAAGTCTTCTTGAAGGGGTCGGTTCCGTCAAGTTGTTTTTGATAACT
TGTGGTTCTCTTTTTTGGCGGGGTTTTCTCGTGTTTTTTTTTGTTCGCTC
ACCGATGCCGATAGTCCCCTTTTTAGTTTCCGCGCCCCACACGGATATAC
AAGAGTATGATTGTACGGTAGTCAATCAACGTGATACATGCGTGATGAGT
AACCTTGATACCTTGTTAGGTTAGAGACATCAAGCGGCACTTCAACCAGC
AGTAGAGATTGCTGTTGATGGTCTAGCGCACTCGGTCGTCGTTAACTTGT
CTTTTTATTTTCTTTTTCGTCGACTTTCCTTCCCTTTTTTCATGAGTGTG
TTTTTGTTTTTTTGTCCTTCAGTCTTGTTCACCGACCTTTTTTCATGTTC
ACCGGCGTTTCTTTTGTTGTCTCTTATCAGCTTTTTTTTTCGACCTTTGT
TGTATCTTTCATCGTGTTTTTGCCCTTTGTTCATCGGCTTTTCAAGTTCA
CTTTTGTTGCTATCTTTAATAGACTCTTCAGCGGCAAATATTGTTGTATT
TTCATCGGCCTTTCAACTGCAAATTTTGTCAGTAGAGGATACAATATACC
TCACGACACACTCGACGCTATGACATGGTTGACACACACTCTATACAAGA
CGAAGAGACCCAATCATATACATTGGTTGGTTGGGTTGCGGTCAAGCTTA
GGGTTGGTTGTTTTAGTATCGAACACAGCAGTGACCCTCAATCATAGTAG
ATGGTGTCGACTACGCGGTAAGGTACTCCCAAGCATTTGTTGTTGTTCTC
TTGTCATCGACTTTGTCAACTGCACTTTCTGTACGTTCAACCAGGTTACT
GTGCCCATGCTGATCATGCCGGCGGGAGATGACCCCGACCACACACCCCT
GAAAGAGGTTTTAGACACAAAGCCTTTCGGGGACAAGTGCGAGTACCGCC
GCTTCGACGACATGCACCATGGCTTCTGCTCCGCGAGGTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig10:1796..7136+

>mRNA_M-pyrifera_M_contig10.2.1 ID=mRNA_M-pyrifera_M_contig10.2.1|Name=mRNA_M-pyrifera_M_contig10.2.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1326bp|location=Sequence derived from alignment at M-pyrifera_M_contig10:1796..7136+ (Macrocystis pyrifera P11B4 male)
TCGTGTTGTGCGGCAGGTCCTCCTGTGGTGTGCGACTACACCCCCAAGGG
CACCGTCTCCAAGATCGGCGATATGGACACCTACTTCATCGTCGTGTTGT
GCGGCAGGTCCTCCTGTGGTGTGCGACTACACCCCCAAGGGCACCGTCTC
CAAGATCGGCGATATGGACACCTACTTCATCGGTTCTGGTCCGAAGTGTA
TCGTGGTCGTCTACGATATCTTCGGCTTCAGCACACAAGCCAAGCAGGCA
AGTCAGCACTCTATTTTGATAGTTCTGGTCCGAAGTGTATCGTGGTCGTC
TACGATATCTTCGGCTTCAGCACACAAGCCAAGCAGGCAAGTCAGCACTC
TATTTTGATACAGGTCTGCGACAAGTTTGCGGCTACGGGTTTCAACGTGG
CGATGCCGGACTTCTTCCAGGGGAAGCAATGGCTCATCAAAAACTGGCCC
CCGACAGACAAGCGACAGGTCTGCGACAAGTTTGCGGCTACGGGTTTCAA
CGTGGCGATGCCGGACTTCTTCCAGGGGAAGCAATGGCTCATCAAAAACT
GGCCCCCGACAGACAAGCGATTTTCCACGTGGATCAGCACTGTGGGCGAC
TGGGACACCGCGACCCTCCCCAAGTTCACCGACACTGTCGCCCACATGAA
AGAGCACAAGGGAGCCGAACTCTTTGGGATGGCAGGGTTCTGCTGGGGGG
GGATGGTCTCCATGAAGGCGGCCGCTTTGGGTACCGATGCCGAGCTTATG
GCGACCGCCTGTTGCCACCCCGCGATGCTCACCCCCGAGCTAGCGGAGAA
GTTTTCCACGTGGATCAGCACTGTGGGCGACTGGGACACCGCGACCCTCC
CCAAGTTCACCGACACTGTCGCCCACATGAAAGAGCACAAGGGAGCCGAA
CTCTTTGGGATGGCAGGGTTCTGCTGGGGGGGGATGGTCTCCATGAAGGC
GGCCGCTTTGGGTACCGATGCCGAGCTTATGGCGACCGCCTGTTGCCACC
CCGCGATGCTCACCCCCGAGCTAGCGGAGAAGGTTACTGTGCCCATGCTG
ATCATGCCGGCGGGAGATGACCCCGACCACACACCCCTGAAAGAGGTTTT
AGACACAAAGCCTTTCGGGGACAAGTGCGAGTACCGCCGCTTCGACGACA
TGCACCATGGCTTCTGCTCCGCGAGGTGAGTTACTGTGCCCATGCTGATC
ATGCCGGCGGGAGATGACCCCGACCACACACCCCTGAAAGAGGTTTTAGA
CACAAAGCCTTTCGGGGACAAGTGCGAGTACCGCCGCTTCGACGACATGC
ACCATGGCTTCTGCTCCGCGAGGTGA
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