mRNA_L-elsbetiae_contig1731.4837.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1731.4837.1 vs. uniprot
Match: D7FVZ0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVZ0_ECTSI) HSP 1 Score: 183 bits (464), Expect = 2.460e-51 Identity = 95/128 (74.22%), Postives = 106/128 (82.81%), Query Frame = -1 Query: 52 RSVSGVLSGFADWLMPGMEGRRSTDKTELLMEVYPSEPRSPPEARRPAVTRSAPPTPRGRR-PSSVLRDGGWFYNGDSDYSTSEEGMDANYESEDEGFWADAGTTKPPSKIGGGGGHGILSRLRKLFT 432 RSVSGV SG ADWLMPGME RR KTELL+EVYPS P+SP + P VTRSAPPTPRGRR P+SVLRDGGWFYNGDSDYST EE +D ++ESEDEGFWADA +K P +IGGGGG IL+RL+KLFT Sbjct: 599 RSVSGVFSGLADWLMPGMERRRPAVKTELLLEVYPSAPQSPERGQPPVVTRSAPPTPRGRRRPTSVLRDGGWFYNGDSDYSTEEE-VDGSFESEDEGFWADAAESKAPQRIGGGGGDSILTRLKKLFT 725 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1731.4837.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1731.4837.1 >prot_L-elsbetiae_contig1731.4837.1 ID=prot_L-elsbetiae_contig1731.4837.1|Name=mRNA_L-elsbetiae_contig1731.4837.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=151bp SPTAEKKKISPPSPPASRKQLPEAAQDAVPAAAPYLRWRLRRPCVRPKSLback to top mRNA from alignment at L-elsbetiae_contig1731:11607..12061+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1731.4837.1 ID=mRNA_L-elsbetiae_contig1731.4837.1|Name=mRNA_L-elsbetiae_contig1731.4837.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=455bp|location=Sequence derived from alignment at L-elsbetiae_contig1731:11607..12061+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1731:11607..12061+ >mRNA_L-elsbetiae_contig1731.4837.1 ID=mRNA_L-elsbetiae_contig1731.4837.1|Name=mRNA_L-elsbetiae_contig1731.4837.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=906bp|location=Sequence derived from alignment at L-elsbetiae_contig1731:11607..12061+ (Laminarionema elsbetiae ELsaHSoW15)back to top |