mRNA_L-elsbetiae_contig173.4830.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig173.4830.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI) HSP 1 Score: 347 bits (891), Expect = 2.330e-107 Identity = 291/505 (57.62%), Postives = 342/505 (67.72%), Query Frame = 1 Query: 31 EDRSRLDGFELEIFKLAREHATSEQWREWLRAPLEHAAADGNMELFTRLMDAGADGGAGWRGCRGRTLLGAAVYGKREKIVQALLQAGAKPDLDVKFGAKSGSALHVAAMQGAGKIYNMLMLAGADPNVRNVYKETPXXXXXXXXXXXXXXXXXXXXXXXXAKTRGAKXXXXXXXXXXXXXXXXXXXXXXXARKDSTTSAGXXXXXXXXXXXXXXXXXXXXXXXADVYCRGGYTS---CSPLDMAACRGHLDVVRKLIQHGSS-AKASSYKGFTALHCAADGGAAHGDRGDIIRVLLEAEADIEAKTTQNGL-TPLHYAVSRRVASRDTLCALLEGGANLMARSADGYAPLHKACSNSDVGGVELLLRWGTDETLVDQRGKTAEDLVGTWEHSDGTDDEERKADDRRIRHMLARAPADRSWRRRGWLVLARSCPDKVQVAQGGDXXXXXXXXXXXXXXXXXXXXXXXXXXETTC-------LLRLVGRVIELDAEGVFRLVVGFL 1509 EDRSRL GFE+EIFKL R AT EQW+EWLRAPLEHAAA+GN++LFTRLMDAGA+ AGWRGC GRTLLGAA G+ EK+++ LL AGA D++V FG +S SALHVAA +GA LM+AGADPNVR+ +PXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXA+ R T+ CSPL++AA RGH DV++ L+ SS ++ G+ ALH A D+GD +RVLL A AD+ K T + TPLH AV+R + S T+CALLEGGAN+ AR+A PLH AC+ VELLLRWG DE L + G T D+VG E +D DDEER+AD++RI MLARAPADRSWRRRGWLVL+RSCP +V +A G + L LVGR++ L+AEG+FRLVVGFL Sbjct: 9 EDRSRLVGFEIEIFKLLRREATPEQWKEWLRAPLEHAAAEGNLDLFTRLMDAGANTEAGWRGCHGRTLLGAAALGRSEKMIRTLLTAGATDDVNVLFGGESESALHVAAARGADDTCRALMIAGADPNVRDRVGRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXANCGLRSMCTNGSRCSPLEIAAGRGHADVLKALLDKRSSEVDTANDLGWAALHYVASFDETVRDKGDAVRVLLGAGADVNVKGTNDSCATPLHLAVNRWMTSTGTICALLEGGANINARTAGDDTPLHIACTRLRGSVVELLLRWGADEKLPNNDGDTPADVVGVLEQND-LDDEEREADNQRIHRMLARAPADRSWRRRGWLVLSRSCPTRVHIANGSSSSSSISRINGNSAKVARVSGQGSSRDDEETEDQMMVDLRDLVGRLVGLEAEGLFRLVVGFL 511
BLAST of mRNA_L-elsbetiae_contig173.4830.1 vs. uniprot
Match: A0A6H5L812_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L812_9PHAE) HSP 1 Score: 321 bits (823), Expect = 8.460e-98 Identity = 236/506 (46.64%), Postives = 285/506 (56.32%), Query Frame = 1 Query: 31 EDRSRLDGFELEIFKLAREHATSEQWREWLRAPLEHAAADGNMELFTRLMDAGADGGAGWRGCRGRTLLGAAVYGKREKIVQALLQAGAKPDLDVKFGAKSGSALHVAAMQGAGKIYNMLMLAGADPNVRNVYKETPXXXXXXXXXXXXXXXXXXXXXXXXAKTRGAKXXXXXXXXXXXXXXXXXXXXXXXARKDSTTSAGXXXXXXXXXXXXXXXXXXXXXXXADVYCRGGYTSCSPLDMAACRGHLDVVRKLIQHGSS-AKASSYKGFTALHCAADGGAAHGDRGDIIRVLLEAEADIEAKTTQNGL-TPLHYAVSRRVASRDTLCALLEGGANLMARSADGYAPLHKACSNSDVGGVELLLRWGTDETLVDQRGKTAEDLVGTWEHSDGTDDEERKADDRRIRHMLARAPADRSWRRRGWLVLARSCPDKVQVAQGGDXXXXXXXXXXXXXXXXXXXXXXXXXX-----ETTC------LLRLVGRVIELDAEGVFRLVVGFL 1509 EDRSRLDGFE+EIFKL + ATSEQW+EWLRAP EHAAA+GN++ FTRLMDAGA+ GAGWRGC GRTLLGAA +G+ EK+V+ L AGA D++V FG + + LM+ GADPNVR+ K +P AKT XXXXXXXXXXX + ++ Y S SPL++AA RG DVV+ L+ S A+ G+ ALH AA D GD +RVLL A AD+ AK T++ T L+ AV+RR+AS T+ ALLEGGAN+ AR PLH ACS S GVELLLRWG D+ L G+T +V + D DDEE +AD++RIR MLAR PA RSWRRRGWLVL+RSCP +VQ+A G XXXXXXXXXXXX E T L LVGR+I L+A+GVFRLVVGFL Sbjct: 9 EDRSRLDGFEIEIFKLVQRGATSEQWKEWLRAPREHAAAEGNLDFFTRLMDAGANAGAGWRGCNGRTLLGAAAFGRSEKMVRTTLTAGATDDVNVLFGGEREA----------------LMIDGADPNVRDRRKRSPLHLAAVAGHHRVVGMLLLNRACVHAKTASQXXXXXXXXXXXXALCISELLLGANSHLEAVQEL---------------------LAAGANYSLRTNGSRSPLEIAANRGQADVVKALLDKDSGEVDATDGGGWAALHYAASIDGPVRDNGDAVRVLLRAGADVSAKGTKDPCDTSLYLAVNRRIASDGTIRALLEGGANINARIGGDQTPLHVACSRSSAVGVELLLRWGADDKLTTNVGQTPAHVVRALQQDD-LDDEELEADNQRIRRMLARDPAARSWRRRGWLVLSRSCPTRVQIANGSSXXXXXXXXXXXXNGNSAKVAKVSGESSSRDDEETADDMMVDLRDLVGRLIALEADGVFRLVVGFL 476
BLAST of mRNA_L-elsbetiae_contig173.4830.1 vs. uniprot
Match: D8LB27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB27_ECTSI) HSP 1 Score: 303 bits (776), Expect = 1.470e-90 Identity = 266/501 (53.09%), Postives = 320/501 (63.87%), Query Frame = 1 Query: 31 EDRSRLDGFELEIFKLAREHATSEQWREWLRAPLEHAAADGNMELFTRLMDAGADGGA-GWRGCRGRTLLGAAVYGKREKIVQALLQAGAKPDLDVKFGAKSGSALHVAAMQGAGKIYNMLMLAGADPNVRNVYKETPXXXXXXXXXXXXXXXXXXXXXXXXAKTRGAKXXXXXXXXXXXXXXXXXXXXXXXARKDSTTSAGXXXXXXXXXXXXXXXXXXXXXXXADVYCRGGYTSCSPLDMAACRGHLDVVRKLIQHGSSAKASSYKGFTALHCAADGGAAHG--DRGDIIRVLLEAEADIEAKTTQNGL--TPLHYAVSRRVASRDTLCALLEGGANLMARSADGYAPLHKACSNSDVGGVELLLRWGTDETLVDQRGKTAEDLVGTWEHSDGTDDEERKADDRRIRHMLARAPADRSWRRRGWLVLARSCPDKVQVAQGGDXXXXXXXXXXXXXXXXXXXXXXXXXXETTCLLR---LVGRVIELDAEGVFRLVVGFL 1509 + RSRLDGFE+EIFKL +E TSEQW++WL+ PLEHAAA GN++LFTRLMDAG GG GWRGC GRTLLGAA +GK +K+V+ALL+AGA D++V FG + SALHVAA +GA + LM+AGADPN+ + + XXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXX +G+TA+HCA + HG D G ++R+LLEA + A+T ++ L TPLH+AV RR+AS DT ALLEGGAN A PLH AC +S+V VELLLRWG DET + G D++G ++ D +DE+ KAD +RIR MLARAPADRSWRRRGWLVL+RSCP +VQ+A G E + LVG ++ L+A+G+FRLVVGFL Sbjct: 10 DGRSRLDGFEIEIFKLVQEEVTSEQWKQWLQVPLEHAAARGNLDLFTRLMDAGGFGGERGWRGCNGRTLLGAAAWGKSDKVVRALLEAGAGDDVNVLFGPEGKSALHVAAARGAEEASKALMVAGADPNLFDC--KGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVDTGDDQGYTAIHCAVN---RHGPLDNGAVVRLLLEAGGGVNAETGRDFLRWTPLHFAVERRIASIDTTLALLEGGANTNAHGDHSGTPLHVACMHSNVAAVELLLRWGADETCSNDNGDVPADVIGVYDRGD-VNDEDVKADHKRIRRMLARAPADRSWRRRGWLVLSRSCPTRVQIANKGSRVNRNSCPAKVARVSGEDLGGDEEEAENQMTVDWGGLVGSLLGLEADGLFRLVVGFL 504
BLAST of mRNA_L-elsbetiae_contig173.4830.1 vs. uniprot
Match: D8LD22_ECTSI (MHC_I C-terminus family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD22_ECTSI) HSP 1 Score: 294 bits (753), Expect = 9.680e-87 Identity = 269/506 (53.16%), Postives = 321/506 (63.44%), Query Frame = 1 Query: 31 EDRSRLDGFELEIFKLAREHATSEQWREWLRAPLEHAAADGNMELFTRLMDAGADGGAGWRGCRGRTLLGAAVYGKREKIVQALLQAGAKPDLDVKFGAKSGSALHVAAMQGAGKIYNMLMLAGADPNVRNVYKETPXXXXXXXXXXXXXXXXXXXXXXXXAKTRGAKXXXXXXXXXXXXXXXXXXXXXXXARKDSTTSAGXXXXXXXXXXXXXXXXXXXXXXXADVYCRGGYTSCSPLDMAACRGHLDVVRKLIQHGSS-AKASSYKGFTALHCAADGGAAHGDRGDIIRVLLEAEADIEAKTTQNGL--TPLHYAVSRRVASRDTLCALLEGGANLMARSADGYAPLHKACSNSDVGGVELLLRWGTDETLVDQRGKTAEDLVGTWEHSDGTDDEERKADDRRIRHMLARAPADRSWRRRGWLVLARSCPDKVQVA---QGGDXXXXXXXXXXXXXXXXXXXXXXXXXXETTC-------LLRLVGRVIELDAEGVFRLVVGFL 1509 +DR+R+DGFE+EIFKL + ATS+QW+EWLRAPLEHAAA GN+ LFTRLMDAGA AGWRGC GRTLLGAA K +KI++ALL AGAK D++V FGAK SALH+AA +GA + LM+AGA+PN+R XXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXX +V+ + +S A+ + G+TALH AA D+GD +RVLL A AD+ AKTT + L PLH AV RV S T+ ALLEGGA++ R + PLH+AC+ S V VELLLRWG DE L D T D++GT G+D + +AD +RI MLARAPADRSWRRR WLVL+RSCP +V++A + G E L LV R++ L+A+G+FRLVVGFL Sbjct: 11 QDRTRVDGFEVEIFKLVQREATSKQWKEWLRAPLEHAAASGNLGLFTRLMDAGASAEAGWRGCDGRTLLGAAACSKNKKILRALLTAGAKSDVNVLFGAKRESALHLAAARGAEEASKALMIAGANPNLRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXTIVKAFLDTDTSLVNATDHYGYTALHHAALIEVHGRDKGDAVRVLLAAGADVHAKTTDDHLRCAPLHIAVCGRVPSTGTIRALLEGGADVNVRDIEDRTPLHEACTYSSVAAVELLLRWGADEKLTDDGDVTPADMIGT-SGDVGSDHGDIEADGQRIHQMLARAPADRSWRRRSWLVLSRSCPTRVKIANENRSGSSVGSSSSSNGNSTKLARFSGEDSGGGERETEDQMMVDLRGLVTRLVGLEADGLFRLVVGFL 513
BLAST of mRNA_L-elsbetiae_contig173.4830.1 vs. uniprot
Match: A0A6H5JHY5_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY5_9PHAE) HSP 1 Score: 280 bits (715), Expect = 5.080e-76 Identity = 210/518 (40.54%), Postives = 271/518 (52.32%), Query Frame = 1 Query: 31 EDRSRLDGFELEIFKLAREHATSEQWREWLRAPLEHAAADGNMELFTRLMDAGADGGAGWRGCRGRTLLGAAVYGKREKIVQALLQAGAKPDLDVKFGAKSGSALHVAAMQ-------------------GAGKIYNMLMLAGADPNVRNVYKETPXXXXXXXXXXXXXXXXXXXXXXXXAKTRGAKXXXXXXXXXXXXXXXXXXXXXXXARKDSTTSAGXXXXXXXXXXXXXXXXXXXXXXXADVYCRGGYTSCSPLDMAACRGHLDVVRKLIQHGSSAKASSYKGFTALHCAADGGAAHGDRGDIIRVLLEAEADIEAKTTQNGL--TPLHYAVSRRVASRDTLCALLEGGANLMARSADGYAPLHKACSNSDVGGVELLLRWGTDETLVDQRGKTAEDLVGTWEHSDGTDDEERKADDRRIRHMLARAPADRSWRRRGWLVLARSCPDKVQVA-QGGDXXXXXXXXXXXXXXXXXXXXXXXXXXETTCLLR-LVGRVIELDAEGVFRLVVGFL*G 1515 EDRS LDGFE+EI +L RE ATSEQWR+WLR PLEHAAA GN++LFTRLMDAG+ G GWRGC GRTLLGA YG+ EK+V+ALL+AG D +V+F A+ SALHVAA + G ++ ++L+L GA + + + P XXXXXXXXXXXXXXXXX GA A + T S+G GG++S L A C GH +V+ ++ G + + +T LH AAD G ++ VLLEA AD+ AKT QN TPLH AV RRV+S T+ A S D PLH AC+ S+ V+LLL WG D T + G D++ + DG DDE +AD + +R MLARAPAD+SWRR GWLVL+RS P +VQ+ +GG + R L+ R++ L+A+G+FRL+VGFL G Sbjct: 9 EDRSHLDGFEVEIVELVREGATSEQWRQWLRIPLEHAAAKGNLDLFTRLMDAGSSGEPGWRGCNGRTLLGATAYGESEKMVRALLEAGVTYDRNVRFSAEGKSALHVAAARDPNLPACKGYHALHVAAERGHDRVISLLLLKGAHVDAKTYSGDAPLXXXXXXXXXXXXXXXXXLG--------GAHTDV--------------------AERHPTNSSGRWKCFWLPVPTGGRPD------------NGGWSS---LPNAVCCGHATIVKAFLETGIDVDTTDDQAYTVLHRAAD------MDGCVVHVLLEAGADVNAKTDQNSFLYTPLHLAVDRRVSSIRTIRAXXXXXXXXXXXSEDNDTPLHVACTYSNAAVVKLLLCWGADGTCSNGNGHVPADVIRAHDE-DGLDDEHIEADHKHVRRMLARAPADKSWRRHGWLVLSRSGPTRVQIGNRGGSGSSNSCSTKLARVSGKDSSRDDELENQMMVDWRVLLDRLVGLEADGLFRLMVGFLCG 476
BLAST of mRNA_L-elsbetiae_contig173.4830.1 vs. uniprot
Match: D7G692_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G692_ECTSI) HSP 1 Score: 239 bits (611), Expect = 6.610e-66 Identity = 209/500 (41.80%), Postives = 254/500 (50.80%), Query Frame = 1 Query: 46 LDGFELEIFKLAREHATSEQWREWLRAPLEHAAADGNMELFTRLMDAGADGGAGWRGCRGRTLLGAAVYGKREKIVQALL-QAGAKPDLDVKFGAKSGSALHVAAMQGAGKIYNMLMLAGADPNVRNVYKETPXXXXXXXXXXXXXXXXXXXXXXXXAKTRGAKXXXXXXXXXXXXXXXXXXXXXXXARKDSTTSAGXXXXXXXXXXXXXXXXXXXXXXXADVYCRGGYTSCSPLDMAACRGHLDVVRKLIQHGSSAKA----SSYKGFTALHCAADGGAAHGDRGDIIRVLLEAEADIEAKTTQNGLTPLHYAVSRRVASRDTLCALLEGGANLMARSADGYAPLHKACSNSDVGGVELLLRWGTDETLVDQRGKTAEDLVGTWE---HS---DGT-DDEERKADDRRIRHMLARAPADRSWRRRGWLVLARSCPDKVQVAQGGDXXXXXXXXXXXXXXXXXXXXXXXXXXETTCLL---RLVGRVIELDAEGVFRLVV 1500 LDG E+EIFKL RE ATS QWREWLRAPLEHAAA+GN++LFTRLMDAGADG AGWRGC GRTLLGAA YGK E+IV+ LL + GA D++V FG + SALHVAA + + +L++AGADPN+ + +P KT XXXXXXXXXXXXXX D T G XXXXXXXXXXXXXXXXXX + TALHCAA G + + TPLH V R++S DT A++ + + PLH AC S+ V+LLLRWG D+T+VD G+TA D VGTW+ HS DG+ DD++ KAD +R R +LA AP DR WRRRGWLVL RS P KVQ+ + + RLVG ++ L A+ VFR+VV Sbjct: 65 LDGLEVEIFKLVREQATSMQWREWLRAPLEHAAAEGNIDLFTRLMDAGADGSAGWRGCHGRTLLGAAAYGKNEEIVERLLAEDGATEDVNVCFGDRLESALHVAAGRDDQHLSRVLLIAGADPNLLDDVGRSPLHVAAEKGHHRVLGFLLRKGRADANKTTXXXXXXXXXXXXXXXXXTSCVSKLLLYGAD--TDCGDRFENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWNDEDWATALHCAAQGSRPLLEXXXXXXXXXXXXXXXXXXXXECVWTPLHRGVYSRLSSLDTXXXXXXXXXXXNAQAENTWTPLHYACYKSNAAAVDLLLRWGADDTIVDGEGETAADEVGTWDPEVHSNEDDGSIDDDKLKADGQRTRLILACAPVDRLWRRRGWLVLCRSYPTKVQILKDSSSSSSGCSTAKAARVSEEDSGECGDEDGDEARIELGRLVGHIVGLQADVVFRMVV 562
BLAST of mRNA_L-elsbetiae_contig173.4830.1 vs. uniprot
Match: A0A6H5L7E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7E1_9PHAE) HSP 1 Score: 228 bits (582), Expect = 5.720e-60 Identity = 188/504 (37.30%), Postives = 232/504 (46.03%), Query Frame = 1 Query: 31 EDRSRLDGFELEIFKLAREHATSEQWREWLRAPLEHAAADGNMELFTRLMDAGADGGAGWRGCRGRTLLGAAVYGKREKIVQALLQAGAKPDLDVKFGAKSGSALHVAAMQGAGKIYNMLMLAGADPNVRNVYKETPXXXXXXXXXXXXXXXXXXXXXXXXAKTRGAKXXXXXXXXXXXXXXXXXXXXXXXARKDSTTSAGXXXXXXXXXXXXXXXXXXXXXXXADVYCRGGYTSCSPLDMAACRGHLDVVRKLIQHGSSAKASSYKGFTALHCAADGGAAHGDRGDIIRVLLEAEADIEAKTTQN-GLTPLHYAVSRRVASRDTLCALLEGGANLMARSADGYAPLHKACSNSDVGGVELLLRWGTDETLVDQRGKTAEDLVGTWEHSDGTDDEERKADDRRIRHMLARAPADRSWRRRGWLVLARSCPDKVQVAQGGDXXXXXXXXXXXXXXXXXXXXXXXXXXETTC--------------LLRLVGRVIELDAEGVFRLV 1497 EDRSR+DGF++EIFKL + ATSEQW+EWLRAPLEHAAA L T ADG W EK+V+ LL AGA D +V FG + SALHV +GA LM+AGADP +R+ +T A A + + C S S LDMAA RGH DV+ L+ + A S G +H D GD +R LL AD+ AKTT + +PLH AV RR+AS + D PLH AC +S V GVELLLRWG DE L + GKT D++ + D DD+ER+ADD+RI M+A PADRSWRRRGWLVL+RSCP +VQ+A G XXXXXXXXXXXXX + L LVGR++ L+A+G+ RLV Sbjct: 9 EDRSRVDGFKIEIFKLVQREATSEQWKEWLRAPLEHAAAKELGSLHT------ADGH--WS----------------EKMVRTLLTAGATDDANVLFGVEHESALHVVLARGAEDSCRALMIAGADPTLRDRGDDTRWFKEMDTRIFNMTSVIERIWVAAVAGHHRVIGSLLLNRADVHAKTASQSTPLHLAASEGRALCLSELLLGANNHLEAVQELLAAGANCGLRCMLTNGSHSSLDMAAGRGHADVLTALLDKDNIFFAMSVDG--PVH----------DNGDAVRALLGVGADVNAKTTDSICASPLHLAVDRRIASDGMIXXXXXXXXXXXXXXGDDNKPLHLACRHSSVHGVELLLRWGADEKLTNSVGKTPADVIRALQQGD-LDDKEREADDQRIGRMVALVPADRSWRRRGWLVLSRSCPTRVQIANGSSXXXXXXXXXXXXXRINGNAAKVARVSGESSSRDDERTEGDMIVDLRNLVGRLVGLEADGLLRLV 475
BLAST of mRNA_L-elsbetiae_contig173.4830.1 vs. uniprot
Match: D7FZ92_ECTSI (Pfs, NACHT and Ankyrin domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ92_ECTSI) HSP 1 Score: 204 bits (518), Expect = 1.320e-54 Identity = 179/398 (44.97%), Postives = 218/398 (54.77%), Query Frame = 1 Query: 31 EDRSRLDGFELEIFKLAREHATSEQWREWLRAPLEHAAADGNMELFTRLMDAGADGGAGWRGC--RGRTLLGAAVYG-KREKIVQALLQAGAKPDLDVKFGAKSGSALHVAAMQGAGKIYNMLMLAGADPNVRNVYKETPXXXXXXXXXXXXXXXXXXXXXXXXAKTRGA-KXXXXXXXXXXXXXXXXXXXXXXXARKDSTTSAGXXXXXXXXXXXXXXXXXXXXXXXADVYCRGGYTSCSPLDMAACRGHLDVVRKLIQHGS-SAKASSYKGFTALHCAADGGAAHGDRGDIIRVLLEAEADIEAKTTQNG----LTPLHYAVSRRVASRDTLCALLEGGANLMARSADGYAPLHKACSNSDVGGVELLLRWGTDETLVDQRGKTAEDLVGTWEHSD 1197 EDRSR+DGFE+EIFKL +E ATS+QW++WLR PLEHAAA GN++LFTRL+DAGA G GW+G R RTLLGAA G K + +VQALL+AG ++ FGA SALHV +GA LM+AGADPN+ NV ++P A XXXXXXXXXXX A KD T G XXXXXXXXXXXXXXXXXXXXXX + RG+ +++ + S A+ +G+TALH AA + D GD +R LLEA AD+ KT + TPLH AV+RR+AS + PLH AC +V GVELLLRWG DE L + R T D +G W D Sbjct: 8 EDRSRVDGFEIEIFKLVKEEATSKQWKQWLRTPLEHAAAKGNLDLFTRLIDAGAGGEPGWQGWGHRERTLLGAAACGNKSDVMVQALLEAGETEFVNTSFGATRESALHVTVARGAEDASKALMMAGADPNLGNVDGDSPLHLAAEAGHHRVIGILLLRKEAQSADPMNLFLETXXXXXXXXXXXLCISELLMGGADKDVTDGKGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS-RGNAAMLKAFLDKDSREVDATDGRGWTALHYAAYVDRSVHDNGDAVRALLEAGADVNVKTDAHASDDIFTPLHVAVNRRMASICMIXXXXXXXXXXXXXXXCNQTPLHVACMWGNVSGVELLLRWGADEMLKNHRADTPADEIGVWGDED 404
BLAST of mRNA_L-elsbetiae_contig173.4830.1 vs. uniprot
Match: A0A6H5K1F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F4_9PHAE) HSP 1 Score: 201 bits (511), Expect = 2.260e-52 Identity = 154/460 (33.48%), Postives = 215/460 (46.74%), Query Frame = 1 Query: 37 RSRLDGFELEIFKLAREHATSEQWREWLRAPLEHAAADGNMELFTRLMDAGADGGAGWRGCRGRTLLGAAVYGKREKIVQALLQAGAKPDLDVKFGAKSGSALHVAAMQGAGKIYNMLMLAGADPN-VRNVYKETPXXXXXXXXXXXXXXXXXXXXXXXXAKTRGAKXXXXXXXXXXXXXXXXXXXXXXXARKDSTTSAGXXXXXXXXXXXXXXXXXXXXXXXADVYCR---GGYTSCSPLDMAACRGHLDVVRKLIQHGSSAKASSYKGFTALHCAADGGAAHGDRGDIIRVLLEAEADIEAKTTQ--NGLTPLHYAVSRRVASRDTLCALLEGGANLMARSADGYAPLHKACSNSDVGG---VELLLRWGTDETLVDQRGKTAEDL--VGTWEH------SDG----------TDDEERKADDRRIRHMLARAPADRSWRRRGWLVLARSCPDKVQVA 1335 R+ L+G ELEIFKL AT EQW EWLRAPLEHAAA GN+ L RL++AGA+GGAGWRGCRGRT+L AA G +V LL +G D++V + SALHVA++ G L++AGAD N V ++T + D+ S G AD+ R G + + +D+A +GH+ V+ ++++G + +A+ G TALH H + VLL+A AD+ AK +G TPL V S + + ALL+ G N+ + G + LH C + G V+LLLRWG ET V++ G T D+ V T E+ DG T + + +R R +LARAPADR+WRRR WLV+ R+ ++ + A Sbjct: 7 RALLEGAELEIFKLLYFGATPEQWAEWLRAPLEHAAARGNLGLVERLLNAGANGGAGWRGCRGRTMLDAAALGGNPDVVATLLASGCASDVNVVSLSSRRSALHVASVCGHEAAAKKLIIAGADVNRVDPGDACVSLHVAVEGRHGDLVDLLLIGGACPNSRTMSGRTPLHLAAASGNNRVVSTLLGNAMTDVDALDSRGVSPLMVASEGGHCSTVEALLRAGADMNLRHAGGAHLGMTAMDVAVSKGHVGVIEAIVENGGNVRATDTYGLTALH--------HARGAQAVDVLLDAGADVNAKACPALHGFTPLSVCVMDN--SCEAVVALLKRGGNVNDTNCGGLSALHLTCGSLSRGMDRMVDLLLRWGASETAVNKNGLTPSDILKVTTAEYHARDAGGDGSATRCVGGSATRHDSLTKEIQRARVLLARAPADRTWRRRCWLVMLRARAERGRGA 456
BLAST of mRNA_L-elsbetiae_contig173.4830.1 vs. uniprot
Match: D8LQI9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQI9_ECTSI) HSP 1 Score: 184 bits (467), Expect = 5.270e-49 Identity = 103/203 (50.74%), Postives = 133/203 (65.52%), Query Frame = 1 Query: 730 TSCSPLDMAACRGHLDVVRKLIQHGSSA-KASSYKGFTALHCAADGGAAHGDRGDIIRVLLEAEADI-EAKTTQNGLTPLHYAVSRRVASRDTLCALLEGGANLMARSADGYAPLHKACSNSDVGGVELLLRWGTDETLVDQRGKTAEDLVGTWEHSDGTDDEERKADDRRIRHMLARAPADRSWRRRGWLVLARSCPDKVQV 1332 T CSPL++AA GH DV++ L+ SS + +G+ ALH AA D GD +RVLL A AD+ E + TPLH AV+ R S T+ ALLEGG+N+ AR+ PLH AC ++ V GVELLLRWG DE L + GKT D++ +D D+EER+AD++RIR ML APADRSWRRRGWLVL+RSCP +V++ Sbjct: 82 TRCSPLEIAAHGGHADVLKALLDKDSSQLDDTDGEGWAALHYAAVVDGPVRDNGDAVRVLLGAGADVNETNNNDSCFTPLHIAVNGRKVSDGTVRALLEGGSNIHARALLDQTPLHIACKHASVTGVELLLRWGADEKLTNNVGKTPADVIRPRRQNDFDDEEEREADNQRIRRMLEHAPADRSWRRRGWLVLSRSCPTRVEI 284 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig173.4830.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig173.4830.1 >prot_L-elsbetiae_contig173.4830.1 ID=prot_L-elsbetiae_contig173.4830.1|Name=mRNA_L-elsbetiae_contig173.4830.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=500bp MEGSGVEDRSRLDGFELEIFKLAREHATSEQWREWLRAPLEHAAADGNMEback to top mRNA from alignment at L-elsbetiae_contig173:18314..21216- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig173.4830.1 ID=mRNA_L-elsbetiae_contig173.4830.1|Name=mRNA_L-elsbetiae_contig173.4830.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2903bp|location=Sequence derived from alignment at L-elsbetiae_contig173:18314..21216- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig173:18314..21216- >mRNA_L-elsbetiae_contig173.4830.1 ID=mRNA_L-elsbetiae_contig173.4830.1|Name=mRNA_L-elsbetiae_contig173.4830.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3000bp|location=Sequence derived from alignment at L-elsbetiae_contig173:18314..21216- (Laminarionema elsbetiae ELsaHSoW15)back to top |