mRNA_L-elsbetiae_contig10491.483.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10491.483.1 vs. uniprot
Match: D8LBK5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBK5_ECTSI) HSP 1 Score: 266 bits (679), Expect = 1.970e-83 Identity = 139/181 (76.80%), Postives = 151/181 (83.43%), Query Frame = -3 Query: 413 VPSTAVLASSSLSMSSTADKKVYGVPNSGWRSPQWNWGSASGTGHDCAAICRRTYGTREARQELVSSLLSGEIAVDFEEVKLTMALAWQNGRWDGSDGGPGGYGDVLQTMAKAARYEEGSVEECARNLAQDMQARFALLKPTKEQRTAMDRLGEDSKDDPVAARNRCSGLILQAMGFVENG 955 +PS V +S LSMS+ +YGVPNSGW+SPQWNWGSASGTGHDCAAICRRTYGT+EARQELVSSLLSG AVDFEEVKLTMALAWQNGRWDGSDGG GGYGDVL MA+A RYEEGS EE AR L +DM+ RFALL PTKEQ AMD L DS +D +AARNRC GL+LQAMGFVENG Sbjct: 35 LPSAGV--TSGLSMSTPT---IYGVPNSGWKSPQWNWGSASGTGHDCAAICRRTYGTKEARQELVSSLLSGGTAVDFEEVKLTMALAWQNGRWDGSDGGDGGYGDVLTMMAQAKRYEEGSEEERARKLVEDMRPRFALLSPTKEQMAAMDGLIADS-NDVLAARNRCCGLVLQAMGFVENG 209
BLAST of mRNA_L-elsbetiae_contig10491.483.1 vs. uniprot
Match: A0A448Z4V7_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z4V7_9STRA) HSP 1 Score: 205 bits (522), Expect = 3.720e-60 Identity = 105/170 (61.76%), Postives = 122/170 (71.76%), Query Frame = -3 Query: 413 SMSS-TADKKVYGVPNSGWRSPQWNWGSASGTGHDCAAICRRTYGTREARQELVSSLLSGEIAVDFEEVKLTMALAWQNGRWDGSDGGPGGYGDVLQTMAKAARYEEGSVEECARNLAQDMQARFALLKPTKEQRTAMDRLGEDSKDDPVAARNRCSGLILQAMGFVENG 919 SMSS + K +YGVPNSGW SP+WNWG ASGTGHDCAAICRR Y TR R L+ L+S A D EEVKL MALAWQ+GRWDGSDGGPGGYGDVL MA A RYE+ + L +DM+ RF LL PT + R AM+ L D+ DD +A CSGL+L+AMGFVE+G Sbjct: 32 SMSSPSGSKXIYGVPNSGWTSPEWNWGYASGTGHDCAAICRRKYSTRGERSALIDELVSASPATDLEEVKLVMALAWQSGRWDGSDGGPGGYGDVLAAMADAXRYEDEKTGNLS--LLRDMKERFGLLNPTNDDRIAMENL-TDNGDDVDSALRTCSGLVLKAMGFVESG 198
BLAST of mRNA_L-elsbetiae_contig10491.483.1 vs. uniprot
Match: B7FUQ5_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FUQ5_PHATC) HSP 1 Score: 204 bits (518), Expect = 7.160e-60 Identity = 101/175 (57.71%), Postives = 121/175 (69.14%), Query Frame = -3 Query: 413 LSMSSTADKKVYGVPNSGWRSPQWNWGSASGTGHDCAAICRRTYGTREARQELVSSLL-----SGEIAVDFEEVKLTMALAWQNGRWDGSDGGPGGYGDVLQTMAKAARYEEGSVEECARNLAQDMQARFALLKPTKEQRTAMDRLGEDSKDDPVAARNRCSGLILQAMGFVENG 922 +S+ ST K +YG+P SGW SPQW WG GTGHDCAAICRR Y R+ R ELV L+ S + +FEEVKL +AL WQNGRW+G DGG GGYG+VLQ MA A RYE G +EC+ L +DM RF LL P+ EQ+ MD+L +D+ D AR RCSGL+LQAMGFVE G Sbjct: 1 MSLPSTNVKTIYGIPGSGWTSPQWQWGYGVGTGHDCAAICRRLYEKRQFRVELVEQLIESSNPSNRVPANFEEVKLVLALVWQNGRWNGKDGGEGGYGEVLQEMASARRYENGPDDECSGLLVRDMARRFPLLNPSGEQQKLMDQLLKDADSDYDFARRRCSGLVLQAMGFVEQG 175
BLAST of mRNA_L-elsbetiae_contig10491.483.1 vs. uniprot
Match: A0A1E7FCR0_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FCR0_9STRA) HSP 1 Score: 199 bits (506), Expect = 3.900e-58 Identity = 104/174 (59.77%), Postives = 124/174 (71.26%), Query Frame = -3 Query: 413 MSSTADKKVYGVPNSGWRSPQWNWGSASGTGHDCAAICRRTYGTREARQELVSSL-LSGEIA--VDFEEVKLTMALAWQNGRWDGSDGGPGGYGDVLQTMAKAARYEEGSVEECARNLAQDMQARFALLKPTKEQRTAMDRLGEDSKDDPV---AARNRCSGLILQAMGFVENG 916 M + K +YGVPNSGW SP WNWGSASGTGHDCA ICR+TY T+E R L++SL LS E A +DFEEVKL MALAWQNGRWDGSDGG GGYGDVL MA A RYEE +VE+ L +DMQ RF LL P E M +L ++S ++ + CSGL+L+AMGF++NG Sbjct: 1 MPKSTSKTIYGVPNSGWTSPSWNWGSASGTGHDCAKICRQTYSTKEVRLNLINSLILSDETAKAIDFEEVKLVMALAWQNGRWDGSDGGVGGYGDVLSMMANAKRYEE-NVEDGKTLLFRDMQERFHLLDPNNEDEIMMKQLLDNSDNNDIDIDTTLRCCSGLVLKAMGFIQNG 173
BLAST of mRNA_L-elsbetiae_contig10491.483.1 vs. uniprot
Match: A0A7S4ALM8_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ALM8_9STRA) HSP 1 Score: 191 bits (485), Expect = 1.380e-54 Identity = 104/180 (57.78%), Postives = 120/180 (66.67%), Query Frame = -3 Query: 422 TAVLASSSLSMSSTADKKVYGVPNSGWRSPQWNWGSASGTGHDCAAICRRTYGTREARQELVSSLLSGEI-----AVDFEEVKLTMALAWQNGRWDGSDGGPGGYGDVLQTMAKAARYEEGSVEECARNLAQDMQARFALLKPTKEQRTAMDRLGEDSKDDPVAARNRCSGLILQAMGFV 946 T + A + SM S+ K +YGVPNSGW SP WN G SGTGHDCAAICR Y TREAR L+ L+S ++D EEVKL MAL WQNGRWDGSDGGPGGYGDVL TMA A RYE+ S E A L +DM+ RF LL PT + RTAM+ L E D +A CSGL+L+A GF Sbjct: 29 TNLFAVNGFSMPSS--KTIYGVPNSGWTSPNWNXGYGSGTGHDCAAICRGKYSTREARSALIDRLISSTTTSTTTSIDLEEVKLVMALKWQNGRWDGSDGGPGGYGDVLATMANAKRYEDDSTGELA--LLRDMKERFGLLNPTDDDRTAMENLAEGG--DVRSALLSCSGLVLKATGFA 202
BLAST of mRNA_L-elsbetiae_contig10491.483.1 vs. uniprot
Match: A0A7S0BXZ8_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BXZ8_9STRA) HSP 1 Score: 184 bits (466), Expect = 1.380e-51 Identity = 97/188 (51.60%), Postives = 122/188 (64.89%), Query Frame = -3 Query: 413 TAVLASSSLSMSSTADKKVYGVPNSGWRSPQWNWGSASGTGHDCAAICRRTYGTREARQELVSSLLSGEIAVD--FEEVKLTMALAWQNGRWDGSDGGPGGYGDVLQTMAKAARYEEG----SVEECARNLAQDMQARFALLKPTKEQ----RTAMDRLGEDSKDDPVAARNRCSGLILQAMGFVENG 946 T L+S++L M+ +YG+PNSGW+SPQWNWGSA GTGHDCA ICR+ + TRE+R EL+ L SG D FEEVKL + LAWQNGRWDGSDGG GGYG+VL MA A RYEEG S + RN D+Q R+ L+ KE ++ L + + AR +C GL+L+AMGF+E G Sbjct: 37 TRQLSSTTLQMTD-----LYGIPNSGWKSPQWNWGSAMGTGHDCAMICRQKFSTRESRTELIDQLCSGSSPYDAPFEEVKLVLGLAWQNGRWDGSDGGRGGYGEVLNRMADADRYEEGGSGGSFLDANRNFVLDLQERYPLIANQKEDLEDMKSVASLLDAEDVNQMDVARRKCCGLVLKAMGFIEKG 219
BLAST of mRNA_L-elsbetiae_contig10491.483.1 vs. uniprot
Match: K0R840_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R840_THAOC) HSP 1 Score: 174 bits (441), Expect = 4.060e-48 Identity = 98/199 (49.25%), Postives = 126/199 (63.32%), Query Frame = -3 Query: 413 VPSTAVLASSSLSMSSTAD---KKVYGVPNSGWRSPQWNWGSASGTGHDCAAICRRTYGTREARQELVSSLLSG------EIAVDFEEVKLTMALAWQNGRWDGSDGGPGGYGDVLQTMAKAARYEEGSVEECARNLAQDMQARFALLKPTKEQRTAMDRL------GEDSKDDPVAA-RNR--CSGLILQAMGFVENG 955 V S ++ S L+MS++ +++Y +PNSGW S WNWG ASGTGHDCAAICR+ Y +R+ RQ LVSSLL V FEEVKL + LAWQ GRWDGSDGGP GYG+VLQTMA A RYE A N QD+ A+F+ + ++E+ M + G S +P +NR C+GL+L+AMGFV+NG Sbjct: 6 VTSAEKISKSRLAMSTSVSETTREIYNIPNSGWCSDSWNWGYASGTGHDCAAICRKMYASRDDRQRLVSSLLEPVQFNALHQEVSFEEVKLILGLAWQRGRWDGSDGGPNGYGEVLQTMAMAIRYENEDDVISAINFIQDITAKFSTISKSEEKLNRMKDMANACKGGHSSIINPETVFKNRRICAGLVLEAMGFVDNG 204
BLAST of mRNA_L-elsbetiae_contig10491.483.1 vs. uniprot
Match: A0A7S4W8J9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W8J9_9STRA) HSP 1 Score: 167 bits (422), Expect = 1.590e-45 Identity = 86/166 (51.81%), Postives = 108/166 (65.06%), Query Frame = -3 Query: 413 KKVYGVPNSGWRSPQWNWGSASGTGHDCAAICRRTYGTREARQELVSSLLSGEI----AVDFEEVKLTMALAWQNGRWDGSDGGPGGYGDVLQTMAKAARYEEGSVEECARNLAQDMQARFALLKPTKEQRTAMDRLGEDSKDDPVAARNRCSGLILQAMGFVENG 898 K +YG+PNSGW SP+WNWGSA GTGHDCA ICR Y T R++LV +L+ + ++DFEEVKL +ALAWQ R G + YG +L MAKA RYE G EEC+R QDMQ RF L + + AM L ++ D V R RCSGL+L+AMGF+E+G Sbjct: 30 KTIYGIPNSGWASPKWNWGSAFGTGHDCAMICRNQYNTPAKREKLVDTLIKADPKDSESLDFEEVKLVLALAWQKARRYGLES----YGQILDEMAKAERYEIGDEEECSRLFVQDMQKRFMWLNAEVDDKIAMSTLWYETSDYDVG-RRRCSGLVLKAMGFIEDG 190
BLAST of mRNA_L-elsbetiae_contig10491.483.1 vs. uniprot
Match: A0A6U5HKK7_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A6U5HKK7_9STRA) HSP 1 Score: 167 bits (423), Expect = 2.650e-45 Identity = 85/175 (48.57%), Postives = 112/175 (64.00%), Query Frame = -3 Query: 413 STADKKVYGVPNSGWRSPQWNWGSASGTGHDCAAICRRTYGTREARQELVSSLLSGEI---------AVDFEEVKLTMALAWQNGRWDGSDGGPGGYGDVLQTMAKAARYEEGSVEECARNLAQDMQARFALLKPTKEQRTAMDRLGEDSKDDPVAARNRCSGLILQAMGFVENG 910 S+ K++YG+P SGW SP WNWG GTGHDCAAICRR YG++ +R EL+ LL G + ++FEEVKL + LAWQNGRW G DGG GGY +VLQ MA A RYE G +C +DM R+ LLKP M E ++ V+ + +C+GL+L++MGF+E+G Sbjct: 47 SSTTKEIYGIPGSGWSSPSWNWGYGVGTGHDCAAICRRKYGSKSSRGELLRQLLLGVVDDSSNNSDDVLNFEEVKLILGLAWQNGRWSGKDGGEGGYSEVLQRMADAQRYEVGP--DCEALFVKDMAERYHLLKPDVADAQEMKGCCEADQNVQVS-KLKCAGLVLKSMGFLEDG 218
BLAST of mRNA_L-elsbetiae_contig10491.483.1 vs. uniprot
Match: A0A1Z5JU45_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JU45_FISSO) HSP 1 Score: 164 bits (415), Expect = 1.310e-44 Identity = 86/165 (52.12%), Postives = 112/165 (67.88%), Query Frame = -3 Query: 413 TADKKVYGVPNSGWRSPQWNWGSASGTGHDCAAICRRTYGTREARQELVSSLLSGEIAVDFEEVKLTMALAWQNGRWDGSDGGPGGYGDVLQTMAKAARYEEGSVEECARNLAQDMQARFALLKPTKEQRTAMDRLGEDSKDDPVAARNRCSGLILQAMGFVENG 907 ++ K +Y +P SGW SPQWNWG A GTGHDCA ICR+ Y TR AR L+ ++ + +FEE+KL +ALAWQ GRWDG+DGG GGYG VL+ +A A RYE + + DMQ RF LLKP+ + + M+ L E ++ VAAR +CS L+L+AMGFVE G Sbjct: 25 SSPKLIYNIPGSGWTSPQWNWGYAVGTGHDCARICRQQYATRAARVALLQNIATKP--ENFEEIKLVLALAWQKGRWDGTDGGQGGYGQVLEALAAANRYESSNNLQL---FFLDMQERFHLLKPSVDLQKKMNALSE-MENVEVAAR-QCSALVLEAMGFVETG 182 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10491.483.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10491.483.1 >prot_L-elsbetiae_contig10491.483.1 ID=prot_L-elsbetiae_contig10491.483.1|Name=mRNA_L-elsbetiae_contig10491.483.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=325bp MVGLVKKTREPYCPSAYVFIVDLGGSEITCDTLIPCSVVCRETPFACEEQback to top mRNA from alignment at L-elsbetiae_contig10491:3481..4977+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10491.483.1 ID=mRNA_L-elsbetiae_contig10491.483.1|Name=mRNA_L-elsbetiae_contig10491.483.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1497bp|location=Sequence derived from alignment at L-elsbetiae_contig10491:3481..4977+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10491:3481..4977+ >mRNA_L-elsbetiae_contig10491.483.1 ID=mRNA_L-elsbetiae_contig10491.483.1|Name=mRNA_L-elsbetiae_contig10491.483.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1950bp|location=Sequence derived from alignment at L-elsbetiae_contig10491:3481..4977+ (Laminarionema elsbetiae ELsaHSoW15)back to top |