prot_L-elsbetiae_contig1718.4777.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1718.4777.1
Unique Nameprot_L-elsbetiae_contig1718.4777.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length44
Homology
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BLAST of mRNA_L-elsbetiae_contig1718.4777.1 vs. uniprot
Match: D8LPX1_ECTSI (Alpha/beta hydrolase fold n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPX1_ECTSI)

HSP 1 Score: 59.7 bits (143), Expect = 3.120e-9
Identity = 28/35 (80.00%), Postives = 31/35 (88.57%), Query Frame = 0 
Query:    6 KTLTKLGNRAREPGIMGRAVTCVPFDAVSCQQRVD 40
            K L +LG+RAR+ GIMG AVTCVPFDAVSCQQRVD
Sbjct:  279 KFLGELGDRARDMGIMGGAVTCVPFDAVSCQQRVD 313
[Close]
BLAST of mRNA_L-elsbetiae_contig1718.4777.1 vs. uniprot
Match: A0A835ZB94_9STRA (Alpha/beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB94_9STRA)

HSP 1 Score: 49.7 bits (117), Expect = 1.070e-5
Identity = 20/35 (57.14%), Postives = 30/35 (85.71%), Query Frame = 0 
Query:    6 KTLTKLGNRAREPGIMGRAVTCVPFDAVSCQQRVD 40
            K L ++G+RA+E GI+G +V+CVPFDAV CQ+++D
Sbjct:  194 KYLGEIGSRAQELGIIGASVSCVPFDAVGCQEQID 228
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1718.4777.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LPX1_ECTSI3.120e-980.00Alpha/beta hydrolase fold n=2 Tax=Ectocarpus TaxID... [more]
A0A835ZB94_9STRA1.070e-557.14Alpha/beta hydrolase protein n=1 Tax=Tribonema min... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1718contigL-elsbetiae_contig1718:8085..9380 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1718.4777.1mRNA_L-elsbetiae_contig1718.4777.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1718 4655..12489 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1718.4777.1 ID=prot_L-elsbetiae_contig1718.4777.1|Name=mRNA_L-elsbetiae_contig1718.4777.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=44bp
MRATVKTLTKLGNRAREPGIMGRAVTCVPFDAVSCQQRVDIRR*
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