mRNA_L-elsbetiae_contig171.4747.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig171.4747.1 vs. uniprot
Match: D7FSK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK4_ECTSI) HSP 1 Score: 112 bits (279), Expect = 2.360e-25 Identity = 59/81 (72.84%), Postives = 71/81 (87.65%), Query Frame = 1 Query: 91 DLTSMATALFEANFGSSAGAAIVQAPGRVNLIGEHTDYNGGFVMPLALGKKTVVVGRGSVVPKEQARSAG-ELGATCSPKV 330 +LT+ ATALFEA+FG S G A+V APGRVNLIGEHTDYNGGFVMPLALGKKTVVVGRGS+VP+E+A SAG + ++ +P+V Sbjct: 9 ELTNTATALFEASFGPSDGCAVVFAPGRVNLIGEHTDYNGGFVMPLALGKKTVVVGRGSMVPREKAGSAGCRIISSAAPEV 89
BLAST of mRNA_L-elsbetiae_contig171.4747.1 vs. uniprot
Match: A0A7S2E1C8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2E1C8_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 1.670e-10 Identity = 41/74 (55.41%), Postives = 48/74 (64.86%), Query Frame = 1 Query: 94 LTSMATALFEANFGSSAGAAIVQAPGRVNLIGEHTDYNGGFVMPLALGKKTVVVGRGSVVPKEQARSAGELGAT 315 L A + F A FG A QAPGRVNLIGEHTDY GGFV+PLAL K+TVVVG G +VP + S + +T Sbjct: 41 LLGKAKSTFLAAFGEEPTIA-AQAPGRVNLIGEHTDYTGGFVLPLALEKRTVVVGIGKIVPASEDDSLCSIVST 113
BLAST of mRNA_L-elsbetiae_contig171.4747.1 vs. uniprot
Match: A0A448Z511_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z511_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 6.040e-10 Identity = 39/60 (65.00%), Postives = 42/60 (70.00%), Query Frame = 1 Query: 106 ATALFEANFGSS-----AGAAIVQAPGRVNLIGEHTDYNGGFVMPLALGKKTVVVGRGSV 270 A ALFE +FGSS A AI APGRVNLIGEHTDY GGFV+P A+ TVV GRG V Sbjct: 79 AEALFERHFGSSDFPSDATRAIAVAPGRVNLIGEHTDYTGGFVLPFAIDYSTVVYGRGKV 138
BLAST of mRNA_L-elsbetiae_contig171.4747.1 vs. uniprot
Match: A0A3Q2XT66_HIPCM (Galactokinase 1 n=1 Tax=Hippocampus comes TaxID=109280 RepID=A0A3Q2XT66_HIPCM) HSP 1 Score: 67.4 bits (163), Expect = 1.320e-9 Identity = 42/80 (52.50%), Postives = 49/80 (61.25%), Query Frame = 1 Query: 64 MAVSSSSSGDLTSMATALFEANFGSSAGAAIVQAPGRVNLIGEHTDYNGGFVMPLALGKKTVVVGRGSVVPKEQARSAGE 303 MA S G L S AT+LF+ F A V APGRVNLIGEHTDYN G+V+P+AL TVVVG S P+ +A E Sbjct: 1 MAAPVPSLGQLVSEATSLFKQMFDDEAPQFAVCAPGRVNLIGEHTDYNQGYVLPMALPLVTVVVGSASSDPEATIVTASE 80
BLAST of mRNA_L-elsbetiae_contig171.4747.1 vs. uniprot
Match: A0A8J6YEQ1_9BACT (Galactokinase (Fragment) n=1 Tax=Candidatus Sulfomarinibacter sp. MAG AM1 TaxID=2886019 RepID=A0A8J6YEQ1_9BACT) HSP 1 Score: 62.0 bits (149), Expect = 2.110e-9 Identity = 28/56 (50.00%), Postives = 38/56 (67.86%), Query Frame = 1 Query: 94 LTSMATALFEANFGSSAGAAIVQAPGRVNLIGEHTDYNGGFVMPLALGKKTVVVGR 261 +T A LF +FG GA + +APGR+NLIG+HTDYN GFV+P+ + + VV R Sbjct: 1 MTERAAKLFAEHFGDPTGAVVARAPGRINLIGDHTDYNDGFVLPMIIDRHVEVVAR 56
BLAST of mRNA_L-elsbetiae_contig171.4747.1 vs. uniprot
Match: A0A7S1XDZ9_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XDZ9_9RHOD) HSP 1 Score: 66.6 bits (161), Expect = 2.370e-9 Identity = 35/63 (55.56%), Postives = 43/63 (68.25%), Query Frame = 1 Query: 115 LFEANFGSSAGAAIVQAPGRVNLIGEHTDYNGGFVMPLALGKKTVVVGRGSVVPKEQARSAGE 303 LF+A FG A APGRVN+IGEHTDYN GFV+P+AL + TVVVGR + +R+ GE Sbjct: 54 LFQATFGGEPEIA-ASAPGRVNIIGEHTDYNDGFVLPMALSRSTVVVGRRASPETSLSRAVGE 115
BLAST of mRNA_L-elsbetiae_contig171.4747.1 vs. uniprot
Match: UPI001F07AE05 (galactokinase isoform X1 n=3 Tax=Hypomesus transpacificus TaxID=137520 RepID=UPI001F07AE05) HSP 1 Score: 66.6 bits (161), Expect = 2.550e-9 Identity = 35/56 (62.50%), Postives = 40/56 (71.43%), Query Frame = 1 Query: 91 DLTSMATALFEANFGSSAGAAIVQAPGRVNLIGEHTDYNGGFVMPLALGKKTVVVG 258 DL + A ++FE NFG V APGRVNLIGEHTDYN GFV+P+AL TVVVG Sbjct: 10 DLVAEARSVFEQNFGGDGPEVAVCAPGRVNLIGEHTDYNRGFVLPMALPLVTVVVG 65
BLAST of mRNA_L-elsbetiae_contig171.4747.1 vs. uniprot
Match: A0A7S1GFP4_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GFP4_CYCTE) HSP 1 Score: 66.2 bits (160), Expect = 3.510e-9 Identity = 36/66 (54.55%), Postives = 44/66 (66.67%), Query Frame = 1 Query: 85 SGDLTSMAT---ALFEANFGSSAGAAIVQAPGRVNLIGEHTDYNGGFVMPLALGKKTVVVGRGSVV 273 S DL S+ T L++ +FGS+ I APGRVNLIGEH DY GGFV PLA+ T++ G GSVV Sbjct: 34 SADLQSLVTEAKGLYKRHFGSNDSTVITVAPGRVNLIGEHVDYTGGFVFPLAIEFSTIIYGSGSVV 99
BLAST of mRNA_L-elsbetiae_contig171.4747.1 vs. uniprot
Match: D8LNE1_ECTSI (Galactokinase (Galactose kinase) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNE1_ECTSI) HSP 1 Score: 66.2 bits (160), Expect = 4.050e-9 Identity = 39/80 (48.75%), Postives = 48/80 (60.00%), Query Frame = 1 Query: 88 GDLTSMATALFEANFGSSAGAAIVQA---PGRVNLIGEHTDYNGGFVMPLALGKKTVVVGRGSVVPKEQARSAGELGATC 318 G+L MA L++ FG V A PGRVNLIGEHTDY GGFV+PLAL + TVV G G +V ++A + G C Sbjct: 211 GELLVMARDLYDDTFGPPEDVRHVSAGYAPGRVNLIGEHTDYQGGFVLPLALERGTVVYGVGRLVDSDEATAEGSDRGLC 290
BLAST of mRNA_L-elsbetiae_contig171.4747.1 vs. uniprot
Match: A0A7S2JYB0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JYB0_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 4.200e-9 Identity = 34/65 (52.31%), Postives = 42/65 (64.62%), Query Frame = 1 Query: 91 DLTSMATALFEANFGSSAGAAI--VQAPGRVNLIGEHTDYNGGFVMPLALGKKTVVVGRGSVVPK 279 +LT A AL+E +F + I V APGRVNLIGEH DY GGFV P+A+ TVV G ++ PK Sbjct: 6 ELTQEAQALYEKHFSTDGSGKIMCVMAPGRVNLIGEHVDYTGGFVFPIAISFATVVYGTLTLTPK 70 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig171.4747.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig171.4747.1 >prot_L-elsbetiae_contig171.4747.1 ID=prot_L-elsbetiae_contig171.4747.1|Name=mRNA_L-elsbetiae_contig171.4747.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=128bp MAVSSSSSGDLTSMATALFEANFGSSAGAAIVQAPGRVNLIGEHTDYNGGback to top mRNA from alignment at L-elsbetiae_contig171:23810..24448+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig171.4747.1 ID=mRNA_L-elsbetiae_contig171.4747.1|Name=mRNA_L-elsbetiae_contig171.4747.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=639bp|location=Sequence derived from alignment at L-elsbetiae_contig171:23810..24448+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig171:23810..24448+ >mRNA_L-elsbetiae_contig171.4747.1 ID=mRNA_L-elsbetiae_contig171.4747.1|Name=mRNA_L-elsbetiae_contig171.4747.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=768bp|location=Sequence derived from alignment at L-elsbetiae_contig171:23810..24448+ (Laminarionema elsbetiae ELsaHSoW15)back to top |