mRNA_L-elsbetiae_contig16969.4671.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig16969.4671.1 vs. uniprot
Match: D8LDR8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDR8_ECTSI) HSP 1 Score: 362 bits (930), Expect = 5.690e-116 Identity = 253/562 (45.02%), Postives = 313/562 (55.69%), Query Frame = 1 Query: 1 VAEELLNFLDTHLLAHDPGTASSSSKVLVDQRSRG-------YAIEMHHPALGGWSPLSTATPSETIPKNCRVHVSVNEKLKATPPQ--QQGSMAPS-------------------------------PGASGGFTGAPPSLPPEQAS-EETDGAEMLALPWRRFDQDLGGGSGEGFQICGRRMVIGDVSNSSEGTGLFTWDGSVLLAKYLEHHAVAMRRDFDNQRSRRQTRPTPTTFEGAESHSGVINATGGKTNSLSKETP------------------------APVRVLELGCGTGLAGLAAAFSFGRRESGDN-DSESQAALPCPPRPSNTC----GGDEKGLDRYPSSPTAVEDGVEVVLTDLEYALDNARANVHRNASSLKAVGSTVNAMELDWCRPPADEFVGGDSFDLILAADVVWLDELVEPLVRTLERLTAGWPSCSGG-------------DGRQQENRQEGPAVPSAPSIAAQGLGLAGESVATAHADGFAQKCPGAVVASPPRASPRPQRPKGGQRVLLAYQWRSQRTGNALLEELEKAFHVWEIQPE 1437 VA++LL+FL H A P ++ ++ +R+ G Y++E+H PA GGW+PLS +T SETIP+NCRV V++ K +AT + Q + PS PGA+ G P LP +++S + EMLALPWRRFD+DLGG EG +ICG R+ I DVSNSSEGTGLFTWDG+VLLAKYLEH AVAMRRDF Q+ T+P+ EGA S V A G + AP+RVLELGCGTGLAGLAAAF+FGRR SG + D S+ P PP P G +++G+ + S P V VVLTDLEYAL NARAN N+SSL+AVG+ V+++ELDWCRP E ++FDLILAADVVWLD+LV PLVRTLERLTAGWP GG +G Q+E R E GLA A+ + Q+C A+ R+ RP RP G+RVLLAYQWRS+RTG ALLEEL F V EI E Sbjct: 52 VAQDLLSFLQKHFRA--PAGSTPTTTAPAGERASGDQQDVDLYSVEVHDPARGGWTPLSVSTSSETIPRNCRVRVNIFAKPQATTTRCRQTTTEDPSSSSDGNSCKNLSASLPSGPARRNATFDGTAVPGAATTVDGTP--LPEDESSLDPVAPGEMLALPWRRFDKDLGGEGEEGLKICGNRVAIRDVSNSSEGTGLFTWDGAVLLAKYLEHRAVAMRRDFCEQQPCHSTQPSYRHPEGAGHGSSVTVAAGDSADVXXXXXXXXXXXXXXXXXXXXXXXXXXXVRAAPIRVLELGCGTGLAGLAAAFAFGRRHSGTSGDDNSEVNHPPPPSPCRRRNPLEGENDEGVAQCASPPAQVA----VVLTDLEYALTNARANTFLNSSSLEAVGAEVSSIELDWCRPLPRELSDKEAFDLILAADVVWLDDLVTPLVRTLERLTAGWPG--GGVDAWSAPLPPAPANGTQEERRNE--------------TGLA----ASFGSGASPQECELGGCAA--RSGGRP-RPPAGRRVLLAYQWRSERTGRALLEELGACFCVREIPAE 582
BLAST of mRNA_L-elsbetiae_contig16969.4671.1 vs. uniprot
Match: A0A6H5LL33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL33_9PHAE) HSP 1 Score: 211 bits (538), Expect = 1.490e-59 Identity = 141/312 (45.19%), Postives = 177/312 (56.73%), Query Frame = 1 Query: 1 VAEELLNFLDTHLLAHDPGTASSSSKVLVDQRSRG-------YAIEMHHPALGGWSPLSTATPSETIPKNCRVHVSVNEKLKATPPQQQGSMAPSPGASGG-------------------------FTGAPPS-----LPPEQAS-EETDGAEMLALPWRRFDQDLGGGSGEGFQICGRRMVIGDVSNSSEGTGLFTWDGSVLLAKYLEHHAVAMRRDFDNQRSRRQTRPTPTTFEGAESHSGV-------INATGGK------TNSLSKETP----------APVRVLELGCGTGLAGLAAAFSFGRRESG 753 VA++LL+FL TH+ A T ++++ +R+ G Y++E+H PA GGW+ LS +TPSETIP+NCRV V+V K +AT + + + P +S G TGA + LP +++S + EMLALPWRRFD+DL G EG QICGRR+ I DVSNSSEGTGLFTWDG+VLLAKYLEH AVAMRRDF Q+ T+P+ EGA S V +N G TNS AP+RVLELG GTGLAGLAAAF+FGRR SG Sbjct: 92 VAQDLLSFLQTHVQAAAGSTPTTAAPAC--ERASGDQQDVDLYSVEVHDPARGGWTSLSVSTPSETIPRNCRVRVNVFAKPQATATRCRRTATKDPSSSDGNSSKNLSASLASGQARRNPPFDGTAVTGASTTVDGIPLPEDESSLDSVAPGEMLALPWRRFDKDLRGEGEEGLQICGRRVAIRDVSNSSEGTGLFTWDGAVLLAKYLEHRAVAMRRDFREQQPCLSTQPSCLHPEGAGDGSSVTVVDSADVNINNGSCSGCRSTNSXXXXXXXXXXXXXXRTAPIRVLELGSGTGLAGLAAAFAFGRRHSG 401
BLAST of mRNA_L-elsbetiae_contig16969.4671.1 vs. uniprot
Match: A0A6H5L4A1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4A1_9PHAE) HSP 1 Score: 125 bits (313), Expect = 2.980e-30 Identity = 83/164 (50.61%), Postives = 94/164 (57.32%), Query Frame = 1 Query: 979 MELDWCRPPADEFVGGDSFDLILAADVVWLDELVEPLVRTLERLTAGWPSC-----------SGGDGRQQENRQEGPAVPSAPSIAAQGLGLAGESVATAHADGFAQKCPGAVVASPPRASPRPQRPKGGQRVLLAYQWRSQRTGNALLEELEKAFHVWEIQPE 1437 MELDWCRP E ++FDLILAADVVWLD+LV PLVRTLERLTAGWPS + +G Q+E R E GLA A + QKC G A+ R+ R RP G+RVLLAYQWRS+RTG ALLEEL F V EI PE Sbjct: 1 MELDWCRPLPRELSDKEAFDLILAADVVWLDDLVTPLVRTLERLTAGWPSGGVDASPAPLSPAAANGTQEEQRNE--------------TGLA----ARFGSGAVPQKCEGGGRAA--RSVGR-SRPSAGRRVLLAYQWRSERTGRALLEELGACFRVREIPPE 143
BLAST of mRNA_L-elsbetiae_contig16969.4671.1 vs. uniprot
Match: A0A8K1CNV0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CNV0_PYTOL) HSP 1 Score: 110 bits (274), Expect = 3.300e-23 Identity = 87/265 (32.83%), Postives = 115/265 (43.40%), Query Frame = 1 Query: 316 QASEETDGAEMLALPWRRFDQDLGGGSGEGFQICGRRMVIGDVSNSSEGTGLFTWDGSVLLAKYLEHHAVAMRRDFDNQRSRRQTRPTPTTFEGAESHSGVINATGGKTNSLSKETPAPVRVLELGCGTGLAGLAAAFSFGRRESGDNDSESQAALPCPPRPSNTCGGDEKGLDRYPSSPTAVEDGVEVVLTDLEYALDNARANVHRNASSLKAVGSTVNAMELDWCRPPADEFVGGDSFDLILAADVVWLDELVEPLVRTLERL 1110 Q ++ + LALP R F D G FQI G +++G+V NS GTGL TWDGS++LAKYLEH F + H GK RVLE+G GTGL G++A G + +V+LTDL Y +DN NV + + + V +ELDW +P +D GD FDLILA+DVVW++ELV PLV+TL+ L Sbjct: 90 QNTQSSPDDTCLALPSRLFPVDTTQGE---FQINGHAVLVGEVENSGLGTGLTTWDGSIVLAKYLEHR-----------------------FGNGQLH--------GK------------RVLEVGAGTGLVGISAGLL--------------------------------GAE-------------QVLLTDLAYTMDNLARNVELTGQHAQQIKARVQPVELDWFQPRSDL---GD-FDLILASDVVWVEELVRPLVQTLQTL 259
BLAST of mRNA_L-elsbetiae_contig16969.4671.1 vs. uniprot
Match: A0A6A3FDN6_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3FDN6_9STRA) HSP 1 Score: 108 bits (270), Expect = 1.670e-22 Identity = 88/268 (32.84%), Postives = 116/268 (43.28%), Query Frame = 1 Query: 319 ASEETDGAEMLALPWRRFDQDLGGGSGEGFQICGRRMVIGDVSNSSEGTGLFTWDGSVLLAKYLEHHAVAMRRDFDNQRSRRQTRPTPTTFEGAESHSGVINATGGKTNSLSKETPAPVRVLELGCGTGLAGLAAAFSFGRRESGDNDSESQAALPCPPRPSNTCGGDEKGLDRYPSSPTAVEDGVEVVLTDLEYALDNARANVHRN----ASSLKAVGSTVNAMELDWCRPPADEFVGGDSFDLILAADVVWLDELVEPLVRTLERL 1110 ASE G LALP R F D+ G+ F I GR + IG+V NS +GTGL TWDGSV+LAKYLEH RRD ++ + RV+ELG GTGL G++AA R +V+LTDL+Y +DN NV A++ + + + V+ LDW PP D GD D +LA+DVVW++EL+ PLV T + L Sbjct: 103 ASELFPGHTCLALPSRIFGFDVA--EGDRFAIDGRVVHIGEVGNSGKGTGLTTWDGSVVLAKYLEHQR---RRD-------------------------IVGS----------------RVVELGAGTGLVGISAALLGAR---------------------------------------------QVILTDLDYVVDNLAKNVAETMKLAATAGRPIDTEVSTRVLDWFNPPTDL---GD-IDFVLASDVVWVEELIPPLVATFDTL 275
BLAST of mRNA_L-elsbetiae_contig16969.4671.1 vs. uniprot
Match: A0A662YK58_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YK58_9STRA) HSP 1 Score: 108 bits (271), Expect = 1.760e-22 Identity = 88/260 (33.85%), Postives = 111/260 (42.69%), Query Frame = 1 Query: 343 EMLALPWRRFDQDLGGGSGEGFQICGRRMVIGDVSNSSEGTGLFTWDGSVLLAKYLEHHAVAMRRDFDNQRSRRQTRPTPTTFEGAESHSGVINATGGKTNSLSKETPAPVRVLELGCGTGLAGLAAAFSFGRRESGDNDSESQAALPCPPRPSNTCGGDEKGLDRYPSSPTAVEDGVEVVLTDLEYALDNARANVHRNASSLKAVGSTV----NAMELDWCRPPADEFVGGDSFDLILAADVVWLDELVEPLVRTLERL 1110 E LALP R F D+ +GE F I G+ +VIG+V NS +GTGL TWDGSV+LAKYLEH RRD A RV+ELG GTGL G++AA R EV+LTDL+Y +DN NV + L G V + LDW PP D +G + D +LA+DVVW++EL+ PLV T + L Sbjct: 136 ECLALPSRIFGLDIE--AGERFAIDGKAVVIGEVGNSGQGTGLTTWDGSVVLAKYLEHQR---RRDI-----------------------------------------AGSRVVELGSGTGLVGISAALLGAR---------------------------------------------EVILTDLDYVVDNLAKNVAQTLQLLANEGGKVECKVSTQILDWFSPPDD--LG--NIDFLLASDVVWVEELIPPLVTTFDVL 300
BLAST of mRNA_L-elsbetiae_contig16969.4671.1 vs. uniprot
Match: A0A0P1AN60_PLAHL (Putative N2,N2-dimethylguanosine tRNA methyltransferase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AN60_PLAHL) HSP 1 Score: 106 bits (265), Expect = 8.260e-22 Identity = 81/258 (31.40%), Postives = 104/258 (40.31%), Query Frame = 1 Query: 349 LALPWRRFDQDLGGGSGEGFQICGRRMVIGDVSNSSEGTGLFTWDGSVLLAKYLEHHAVAMRRDFDNQRSRRQTRPTPTTFEGAESHSGVINATGGKTNSLSKETPAPVRVLELGCGTGLAGLAAAFSFGRRESGDNDSESQAALPCPPRPSNTCGGDEKGLDRYPSSPTAVEDGVEVVLTDLEYALDNARANVHRNASSLKAVGSTVNA----MELDWCRPPADEFVGGDSFDLILAADVVWLDELVEPLVRTLERL 1110 LALP R F D+ + F+I GR + IG++ NS +GTGL TWDGSV+LAKYLEH RRD A RV+ELG GTGL G+AAA + +V+L+DL Y +DN NV AVG + ELDW PP D D +LA+DVVW++ L+ PLV+T + L Sbjct: 115 LALPSRSFGSDVS--VSDYFKIDGRMVHIGEIGNSGKGTGLITWDGSVVLAKYLEHER---RRDI-----------------------------------------AGSRVVELGAGTGLVGIAAALLGAK---------------------------------------------QVILSDLSYVIDNLAKNVAETKKLADAVGKPIQCDILTQELDWFNPPTDL----KDIDFVLASDVVWIESLIPPLVKTFDTL 277
BLAST of mRNA_L-elsbetiae_contig16969.4671.1 vs. uniprot
Match: A0A2D4BQT1_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BQT1_PYTIN) HSP 1 Score: 104 bits (260), Expect = 9.570e-22 Identity = 85/258 (32.95%), Postives = 108/258 (41.86%), Query Frame = 1 Query: 349 LALPWRRFDQDLGGGSGEGFQICGRRMVIGDVSNSSEGTGLFTWDGSVLLAKYLEHHAVAMRRDFDNQRSRRQTRPTPTTFEGAESHSGVINATGGKTNSLSKETPAPVRVLELGCGTGLAGLAAAFSFGRRESGDNDSESQAALPCPPRPSNTCGGDEKGLDRYPSSPTAVEDGVEVVLTDLEYALDNARANVHRNAS----SLKAVGSTVNAMELDWCRPPADEFVGGDSFDLILAADVVWLDELVEPLVRTLERL 1110 LALP R FD D G GF+I R +V+G+V NS GTGL TWDGSV+LAKYLEH A + GK RVLE+G GTGL G++AA +VVLTDLEY + N + N++ + S K V + ++A LDW P D DLILA+DVVW+ +L+ PLV TL +L Sbjct: 40 LALPARLFDVDTLSG---GFKIKDRAVVVGEVENSGLGTGLTTWDGSVVLAKYLEHKYSAFMQ--------------------------------GK------------RVLEVGAGTGLVGISAALLG---------------------------------------------ATDVVLTDLEYVVANLQKNINMTLAAAEASAKPVDARISAQVLDWFNPRTDF----GRVDLILASDVVWVKDLIPPLVNTLRQL 201
BLAST of mRNA_L-elsbetiae_contig16969.4671.1 vs. uniprot
Match: G5A2H2_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A2H2_PHYSP) HSP 1 Score: 105 bits (263), Expect = 1.460e-21 Identity = 87/268 (32.46%), Postives = 112/268 (41.79%), Query Frame = 1 Query: 319 ASEETDGAEMLALPWRRFDQDLGGGSGEGFQICGRRMVIGDVSNSSEGTGLFTWDGSVLLAKYLEHHAVAMRRDFDNQRSRRQTRPTPTTFEGAESHSGVINATGGKTNSLSKETPAPVRVLELGCGTGLAGLAAAFSFGRRESGDNDSESQAALPCPPRPSNTCGGDEKGLDRYPSSPTAVEDGVEVVLTDLEYALDNARANVHRN----ASSLKAVGSTVNAMELDWCRPPADEFVGGDSFDLILAADVVWLDELVEPLVRTLERL 1110 A E G LALP R F D+ G+ F I GR + IG+V NS +GTGL TWDGSV+LA+YLEH G I A R++ELG GTGL G++AA R +V+LTDL+Y +DN NV A++ K V S ++ LDW PP D GD D +LA+DVVW++EL+ PLV T + L Sbjct: 103 ADELFPGHTCLALPSRIFGLDVA--EGDQFAIDGRVVHIGEVGNSGKGTGLTTWDGSVVLARYLEHQ-----------------------------RRGDI---------------AGSRIVELGAGTGLVGISAALLGAR---------------------------------------------QVILTDLDYVVDNLAKNVAETMKLAANAGKPVDSDISTRVLDWFNPPTDL---GD-IDFLLASDVVWVEELIPPLVATFDTL 275
BLAST of mRNA_L-elsbetiae_contig16969.4671.1 vs. uniprot
Match: W7T984_9STRA (Nicotinamide N-methyltransferase, putative n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T984_9STRA) HSP 1 Score: 107 bits (267), Expect = 1.900e-21 Identity = 111/387 (28.68%), Postives = 150/387 (38.76%), Query Frame = 1 Query: 319 ASEETDGAEMLALPWRRFDQDLGGGSGEGFQICGRRMVIGDVSNSSEGTGLFTWDGSVLLAKYLEHHAVAMRRDFDNQRSRRQTRPTPTTFEGAESHSGVINATGGKTNSLSKETPAPVRVLELGCGTGLAGLAAAFSFGRRESGDNDSESQAALPCPPRPSNTCGGDEKGLDRYPSSPTAVEDGVEVVLTDLEYALDNARANVHRNASSLKA-------VG---STVNAMELDWCRPPADEFVGGDSFDLILAADVVWLDELVEPLVRTLERLTAGWPSCSGGDGRQQENRQEGPAV--PSAPSIAAQGL---GLAGESVATAHADGFAQKCPGAVVASPPRASPRPQRPKGGQRVLLAYQWRSQRTGNALLEELEKAFHVWEIQP 1434 +S + +LALP RRF DL GEG + R+ + V+NS GTGL TWDG+V+L+KYL + H+ + T E +V+ELG GTGL GL+ A R EV+LTDL YAL+N NV RN + + VG V E DW +PPA V G D+++AADVVWLDELV PL R L + G G G ++ E V PSA + GL G G A + +G +P+ ++ +AYQ RS +T L+ + + V E P Sbjct: 141 SSSSSPDKPVLALPGRRFPLDL---DGEGIPVLDTRIFVKGVANSGLGTGLTTWDGAVVLSKYL-----------------------------IKQHTHATARSQAPTFDFEFEFLKGKKVVELGAGTGLVGLSCAVLGAR---------------------------------------------EVILTDLPYALENLNDNVRRNVGAWRGLVQGPPGVGREEGRVAVEEGDWLQPPASSLVEG--VDVVVAADVVWLDELVPPLGRYLATILMGGGREGGKGGERKRQISESSPVGGPSA-GMVVPGLERPGKGGNETAESGEEGSGXXXXXXXXXXXXXGNPKSRKEWNFPVCFMAYQSRSAQTDALLMATMRQEGLVVEEVP 447 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16969.4671.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig16969.4671.1 >prot_L-elsbetiae_contig16969.4671.1 ID=prot_L-elsbetiae_contig16969.4671.1|Name=mRNA_L-elsbetiae_contig16969.4671.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=479bp VAEELLNFLDTHLLAHDPGTASSSSKVLVDQRSRGYAIEMHHPALGGWSPback to top mRNA from alignment at L-elsbetiae_contig16969:126..2882- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig16969.4671.1 ID=mRNA_L-elsbetiae_contig16969.4671.1|Name=mRNA_L-elsbetiae_contig16969.4671.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2757bp|location=Sequence derived from alignment at L-elsbetiae_contig16969:126..2882- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig16969:126..2882- >mRNA_L-elsbetiae_contig16969.4671.1 ID=mRNA_L-elsbetiae_contig16969.4671.1|Name=mRNA_L-elsbetiae_contig16969.4671.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2874bp|location=Sequence derived from alignment at L-elsbetiae_contig16969:126..2882- (Laminarionema elsbetiae ELsaHSoW15)back to top |