mRNA_L-elsbetiae_contig10466.458.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10466.458.1 vs. uniprot
Match: D8LQE2_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQE2_ECTSI) HSP 1 Score: 147 bits (370), Expect = 1.230e-39 Identity = 75/124 (60.48%), Postives = 92/124 (74.19%), Query Frame = 1 Query: 10 SPRREDH-TQIDGFELDIFKLVREHATFEQWGEWLRAPLEHAATKGDMDLFTRLIDAGADGSAGWRGCHGRTLLGAAAYGK-SDKIVRALLQAGAKPDVN*R---------EVRHEAGVGTSCT 348 +P+R+ H +++DGFE++IFKLV+E A EQW +W RAPLEHA +G++DLFTRL+DAGADG AGWRGCHGRTLLGAAA G SDK+VRALL+AGA+ DVN R V G SCT Sbjct: 3 APKRKGHRSRLDGFEIEIFKLVKEEAAPEQWKQWFRAPLEHATARGNLDLFTRLMDAGADGEAGWRGCHGRTLLGAAACGNNSDKMVRALLEAGARRDVNVRFGNTNESTLHVSAARGAEASCT 126
BLAST of mRNA_L-elsbetiae_contig10466.458.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI) HSP 1 Score: 141 bits (356), Expect = 2.330e-34 Identity = 65/94 (69.15%), Postives = 80/94 (85.11%), Query Frame = 1 Query: 22 EDHTQIDGFELDIFKLVREHATFEQWGEWLRAPLEHAATKGDMDLFTRLIDAGADGSAGWRGCHGRTLLGAAAYGKSDKIVRALLQAGAKPDVN 303 ED +++ GFE++IFKL+R AT EQW EWLRAPLEHAA +G++DLFTRL+DAGA+ AGWRGCHGRTLLGAAA G+S+K++R LL AGA DVN Sbjct: 9 EDRSRLVGFEIEIFKLLRREATPEQWKEWLRAPLEHAAAEGNLDLFTRLMDAGANTEAGWRGCHGRTLLGAAALGRSEKMIRTLLTAGATDDVN 102
BLAST of mRNA_L-elsbetiae_contig10466.458.1 vs. uniprot
Match: D7G6Z7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Z7_ECTSI) HSP 1 Score: 130 bits (327), Expect = 2.770e-34 Identity = 61/82 (74.39%), Postives = 71/82 (86.59%), Query Frame = 1 Query: 58 IFKLVREHATFEQWGEWLRAPLEHAATKGDMDLFTRLIDAGADGSAGWRGCHGRTLLGAAAYGKSDKIVRALLQAGAKPDVN 303 IFKLV+E AT EQW +WLR PLEHAA KG++DLFTRL+DAGADG +GWRGC+GRTLLGAAA G D++VRALL+AGA DVN Sbjct: 4 IFKLVQEEATPEQWKQWLRVPLEHAAAKGNLDLFTRLMDAGADGCSGWRGCYGRTLLGAAACGDGDQMVRALLEAGATDDVN 85
BLAST of mRNA_L-elsbetiae_contig10466.458.1 vs. uniprot
Match: D8LD22_ECTSI (MHC_I C-terminus family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD22_ECTSI) HSP 1 Score: 141 bits (356), Expect = 3.360e-34 Identity = 67/100 (67.00%), Postives = 81/100 (81.00%), Query Frame = 1 Query: 4 SASPRREDHTQIDGFELDIFKLVREHATFEQWGEWLRAPLEHAATKGDMDLFTRLIDAGADGSAGWRGCHGRTLLGAAAYGKSDKIVRALLQAGAKPDVN 303 +AS + +D T++DGFE++IFKLV+ AT +QW EWLRAPLEHAA G++ LFTRL+DAGA AGWRGC GRTLLGAAA K+ KI+RALL AGAK DVN Sbjct: 5 AASQQSQDRTRVDGFEVEIFKLVQREATSKQWKEWLRAPLEHAAASGNLGLFTRLMDAGASAEAGWRGCDGRTLLGAAACSKNKKILRALLTAGAKSDVN 104
BLAST of mRNA_L-elsbetiae_contig10466.458.1 vs. uniprot
Match: A0A6H5KQY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQY9_9PHAE) HSP 1 Score: 137 bits (346), Expect = 3.560e-34 Identity = 68/103 (66.02%), Postives = 81/103 (78.64%), Query Frame = 1 Query: 1 MSASPRREDHTQIDGFELDIFKLVREHATFEQWGEWLRAPLEHAATKGDMDLFTRLIDAGADGSAGWRGCHGRTLLGAAAYGKSDKIVRALLQAGAKPDVN*R 309 MS S +RED +++DGFE+ IFKLV+ T EQW +WL APL HAA KG +DLFTRLI+AGADGSAGWRGCHGRTLLG AA +++VRA L+AGA DVN R Sbjct: 1 MSGS-KREDRSRVDGFEMKIFKLVQAEETPEQWKKWLGAPLNHAAAKGKLDLFTRLINAGADGSAGWRGCHGRTLLGEAARSDGNQMVRAFLEAGATDDVNVR 102
BLAST of mRNA_L-elsbetiae_contig10466.458.1 vs. uniprot
Match: D8LB27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB27_ECTSI) HSP 1 Score: 140 bits (352), Expect = 7.790e-34 Identity = 65/99 (65.66%), Postives = 82/99 (82.83%), Query Frame = 1 Query: 10 SPRREDHTQIDGFELDIFKLVREHATFEQWGEWLRAPLEHAATKGDMDLFTRLIDAGA-DGSAGWRGCHGRTLLGAAAYGKSDKIVRALLQAGAKPDVN 303 S R + +++DGFE++IFKLV+E T EQW +WL+ PLEHAA +G++DLFTRL+DAG G GWRGC+GRTLLGAAA+GKSDK+VRALL+AGA DVN Sbjct: 6 SKREDGRSRLDGFEIEIFKLVQEEVTSEQWKQWLQVPLEHAAARGNLDLFTRLMDAGGFGGERGWRGCNGRTLLGAAAWGKSDKVVRALLEAGAGDDVN 104
BLAST of mRNA_L-elsbetiae_contig10466.458.1 vs. uniprot
Match: A0A6H5L812_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L812_9PHAE) HSP 1 Score: 139 bits (349), Expect = 1.430e-33 Identity = 66/102 (64.71%), Postives = 82/102 (80.39%), Query Frame = 1 Query: 1 MSASPRRE-DHTQIDGFELDIFKLVREHATFEQWGEWLRAPLEHAATKGDMDLFTRLIDAGADGSAGWRGCHGRTLLGAAAYGKSDKIVRALLQAGAKPDVN 303 M S R E D +++DGFE++IFKLV+ AT EQW EWLRAP EHAA +G++D FTRL+DAGA+ AGWRGC+GRTLLGAAA+G+S+K+VR L AGA DVN Sbjct: 1 MPGSKREEEDRSRLDGFEIEIFKLVQRGATSEQWKEWLRAPREHAAAEGNLDFFTRLMDAGANAGAGWRGCNGRTLLGAAAFGRSEKMVRTTLTAGATDDVN 102
BLAST of mRNA_L-elsbetiae_contig10466.458.1 vs. uniprot
Match: D7G692_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G692_ECTSI) HSP 1 Score: 140 bits (352), Expect = 1.850e-33 Identity = 67/90 (74.44%), Postives = 78/90 (86.67%), Query Frame = 1 Query: 37 IDGFELDIFKLVREHATFEQWGEWLRAPLEHAATKGDMDLFTRLIDAGADGSAGWRGCHGRTLLGAAAYGKSDKIVRALL-QAGAKPDVN 303 +DG E++IFKLVRE AT QW EWLRAPLEHAA +G++DLFTRL+DAGADGSAGWRGCHGRTLLGAAAYGK+++IV LL + GA DVN Sbjct: 65 LDGLEVEIFKLVREQATSMQWREWLRAPLEHAAAEGNIDLFTRLMDAGADGSAGWRGCHGRTLLGAAAYGKNEEIVERLLAEDGATEDVN 154
BLAST of mRNA_L-elsbetiae_contig10466.458.1 vs. uniprot
Match: A0A6H5JHY5_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY5_9PHAE) HSP 1 Score: 140 bits (354), Expect = 3.290e-33 Identity = 65/98 (66.33%), Postives = 81/98 (82.65%), Query Frame = 1 Query: 16 RREDHTQIDGFELDIFKLVREHATFEQWGEWLRAPLEHAATKGDMDLFTRLIDAGADGSAGWRGCHGRTLLGAAAYGKSDKIVRALLQAGAKPDVN*R 309 +RED + +DGFE++I +LVRE AT EQW +WLR PLEHAA KG++DLFTRL+DAG+ G GWRGC+GRTLLGA AYG+S+K+VRALL+AG D N R Sbjct: 7 KREDRSHLDGFEVEIVELVREGATSEQWRQWLRIPLEHAAAKGNLDLFTRLMDAGSSGEPGWRGCNGRTLLGATAYGESEKMVRALLEAGVTYDRNVR 104
BLAST of mRNA_L-elsbetiae_contig10466.458.1 vs. uniprot
Match: D8LQE9_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQE9_ECTSI) HSP 1 Score: 132 bits (331), Expect = 3.690e-33 Identity = 68/104 (65.38%), Postives = 82/104 (78.85%), Query Frame = 1 Query: 1 MSASPRREDHTQIDGFELDIFKLVREHATFEQWGEWLRAPLEHAATKGDMDLFTRLIDAGADGSAGWRG--CHGRTLLGAAAYG-KSDKIVRALLQAGAKPDVN 303 MSAS + D +++DGFE++IFKLV+E AT QW +WLR PLEHAA KG++DLFTRL+DAGA G GWRG CH RTLLGAAA G KSDK++ ALL+AG DVN Sbjct: 1 MSAS--KGDRSRVDGFEIEIFKLVKEEATAGQWKQWLRTPLEHAAAKGNLDLFTRLMDAGAGGEPGWRGWGCHERTLLGAAACGTKSDKMIWALLEAGVTDDVN 102 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10466.458.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10466.458.1 >prot_L-elsbetiae_contig10466.458.1 ID=prot_L-elsbetiae_contig10466.458.1|Name=mRNA_L-elsbetiae_contig10466.458.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=102bp MSASPRREDHTQIDGFELDIFKLVREHATFEQWGEWLRAPLEHAATKGDMback to top mRNA from alignment at L-elsbetiae_contig10466:5087..6197- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10466.458.1 ID=mRNA_L-elsbetiae_contig10466.458.1|Name=mRNA_L-elsbetiae_contig10466.458.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1111bp|location=Sequence derived from alignment at L-elsbetiae_contig10466:5087..6197- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10466:5087..6197- >mRNA_L-elsbetiae_contig10466.458.1 ID=mRNA_L-elsbetiae_contig10466.458.1|Name=mRNA_L-elsbetiae_contig10466.458.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=612bp|location=Sequence derived from alignment at L-elsbetiae_contig10466:5087..6197- (Laminarionema elsbetiae ELsaHSoW15)back to top |