mRNA_L-elsbetiae_contig16723.4539.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig16723.4539.1 vs. uniprot
Match: A0A6H5JPF0_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPF0_9PHAE) HSP 1 Score: 218 bits (556), Expect = 9.230e-70 Identity = 105/133 (78.95%), Postives = 117/133 (87.97%), Query Frame = 1 Query: 1 DALEEKVRHWFQVARERFKATKIGVSGSMIQVQATKIAAQMKKTDFKATNGWLHRFLKRYNYTHVNLHGEAGDVDKAKVAEEIERIREQLKEFDVEFIFNMDETGFFYRCFPRGTYVPREETAAGVNSKTARG 399 D +EEK+R W ++AR RF ATKIGVSGSMIQ QA +IAAQM KT+F+AT GWLHRFLKRY++T V LHGEAGDVDK KVAEEIERIREQL+EFDVEFIFNMDETG F+RCFP+GTYV R E AAGVNSKTARG Sbjct: 64 DEVEEKLRKWIKIARARFNATKIGVSGSMIQAQALEIAAQMGKTNFRATKGWLHRFLKRYSFTRVQLHGEAGDVDKQKVAEEIERIREQLQEFDVEFIFNMDETGLFFRCFPKGTYVTRGEAAAGVNSKTARG 196
BLAST of mRNA_L-elsbetiae_contig16723.4539.1 vs. uniprot
Match: D7G3D6_ECTSI (Similar to Tigger transposable element-derived protein 6, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3D6_ECTSI) HSP 1 Score: 209 bits (532), Expect = 2.240e-67 Identity = 100/108 (92.59%), Postives = 103/108 (95.37%), Query Frame = 1 Query: 16 KVRHWFQVARERFKATKIGVSGSMIQVQATKIAAQMKKTDFKATNGWLHRFLKRYNYTHVNLHGEAGDVDKAKVAEEIERIREQLKEFDVEFIFNMDETGFFYRCFPR 339 KVRHWFQVARERFKATKIGVSGSM+QV+ATKIAAQM KTDFKATNGWLHRFLKRYNYTHV LHGEAGDVD AKVAEEIE+IREQ KEFDVEFIFNMDETG FYRCFPR Sbjct: 12 KVRHWFQVARERFKATKIGVSGSMVQVRATKIAAQMNKTDFKATNGWLHRFLKRYNYTHVKLHGEAGDVDTAKVAEEIEQIREQHKEFDVEFIFNMDETGLFYRCFPR 119
BLAST of mRNA_L-elsbetiae_contig16723.4539.1 vs. uniprot
Match: A0A6H5JNS8_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS8_9PHAE) HSP 1 Score: 220 bits (561), Expect = 1.410e-66 Identity = 106/133 (79.70%), Postives = 118/133 (88.72%), Query Frame = 1 Query: 1 DALEEKVRHWFQVARERFKATKIGVSGSMIQVQATKIAAQMKKTDFKATNGWLHRFLKRYNYTHVNLHGEAGDVDKAKVAEEIERIREQLKEFDVEFIFNMDETGFFYRCFPRGTYVPREETAAGVNSKTARG 399 D +EEK+R W ++AR RF ATK+GVSGSMIQ QA KIAAQM KT+FKATNGWL+RFLKRY++THV LHGEAGDVDK KVAEEIERIREQL+EFDV+FIFNMDE G F+RCFPRGTYV R E AAGVNSKTARG Sbjct: 64 DEVEEKLRKWIKIARARFDATKMGVSGSMIQAQALKIAAQMGKTNFKATNGWLYRFLKRYSFTHVQLHGEAGDVDKQKVAEEIERIREQLQEFDVDFIFNMDEMGLFFRCFPRGTYVTRGEAAAGVNSKTARG 196
BLAST of mRNA_L-elsbetiae_contig16723.4539.1 vs. uniprot
Match: A0A6H5K051_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K051_9PHAE) HSP 1 Score: 193 bits (491), Expect = 1.480e-58 Identity = 97/132 (73.48%), Postives = 107/132 (81.06%), Query Frame = 1 Query: 13 EKVRHWF---QVARERFKATKIGVSGSMIQVQATKIAAQMKKTDFKATNGWLHRFLKRYNYTHVNLHGEAGDVDKAKVAEEIERIREQLKEFDVEFIFNMDETGFFYRCFPRGTYVPREETAAGVNSKTARG 399 EK+RH R ATKIGVSGSMIQ QA KI AQM K +FKATNGWLHRFLKRY++THV LHGEAGDVDK KVAEEIERIR+ L+EFDVEFIF+MDETG F+RCFPRGTYV + E AAGVNS+T RG Sbjct: 44 EKIRHMELNQDALRAPKTATKIGVSGSMIQAQALKIVAQMGKNNFKATNGWLHRFLKRYSFTHVQLHGEAGDVDKQKVAEEIERIRKHLQEFDVEFIFDMDETGLFFRCFPRGTYVTKGEAAAGVNSETVRG 175
BLAST of mRNA_L-elsbetiae_contig16723.4539.1 vs. uniprot
Match: A0A6H5K549_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K549_9PHAE) HSP 1 Score: 194 bits (493), Expect = 1.190e-57 Identity = 103/170 (60.59%), Postives = 116/170 (68.24%), Query Frame = 1 Query: 1 DALEEKVRHWFQVARERFK-------------------------------------ATKIGVSGSMIQVQATKIAAQMKKTDFKATNGWLHRFLKRYNYTHVNLHGEAGDVDKAKVAEEIERIREQLKEFDVEFIFNMDETGFFYRCFPRGTYVPREETAAGVNSKTARG 399 D +EEK+R W ++ARER ATKIGVSGSMIQ QA KIAAQM K +FKATNGWLHRFLKRY++T+V L G+AGDVDK KVAEEIERIREQL+EFDVEFIFNMDE G F+RCFPRGT+V R + AAGVNSKTARG Sbjct: 47 DEVEEKLRKWIKIARERSNVSTYLALVMCWSGYNLVVYTPTPFRPYTSSHSRPSCWATKIGVSGSMIQAQALKIAAQMGKANFKATNGWLHRFLKRYSFTYVQLRGKAGDVDKQKVAEEIERIREQLQEFDVEFIFNMDEMGLFFRCFPRGTHVTRGQAAAGVNSKTARG 216
BLAST of mRNA_L-elsbetiae_contig16723.4539.1 vs. uniprot
Match: A0A6H5JEY2_9PHAE (HTH CENPB-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEY2_9PHAE) HSP 1 Score: 195 bits (496), Expect = 2.440e-57 Identity = 92/133 (69.17%), Postives = 107/133 (80.45%), Query Frame = 1 Query: 1 DALEEKVRHWFQVARERFKATKIGVSGSMIQVQATKIAAQMKKTDFKATNGWLHRFLKRYNYTHVNLHGEAGDVDKAKVAEEIERIREQLKEFDVEFIFNMDETGFFYRCFPRGTYVPREETAAGVNSKTARG 399 D LE+++ W +VAR RF+ TKIG+SG MIQ QATK A++M K DF A+ GWLHRFLKRY + H+NLHGEAGDVDK K E+I +IREQL+ FDVE IFNMDETG F+RCFPRGTYV R E AAGVN KTARG Sbjct: 30 DDLEKRLLQWIKVARARFETTKIGLSGIMIQTQATKFASEMGKKDFTASKGWLHRFLKRYGFKHINLHGEAGDVDKTKYEEQIAKIREQLEGFDVELIFNMDETGLFFRCFPRGTYVTRAEDAAGVNRKTARG 162
BLAST of mRNA_L-elsbetiae_contig16723.4539.1 vs. uniprot
Match: A0A6H5JV64_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV64_9PHAE) HSP 1 Score: 195 bits (496), Expect = 1.950e-56 Identity = 92/133 (69.17%), Postives = 107/133 (80.45%), Query Frame = 1 Query: 1 DALEEKVRHWFQVARERFKATKIGVSGSMIQVQATKIAAQMKKTDFKATNGWLHRFLKRYNYTHVNLHGEAGDVDKAKVAEEIERIREQLKEFDVEFIFNMDETGFFYRCFPRGTYVPREETAAGVNSKTARG 399 D LE+++ W +VAR RF+ TKIG+SG MIQ QATK A++M K DF A+ GWLHRFLKRY + H+NLHGEAGDVDK K E+I +IREQL+ FDVE IFNMDETG F+RCFPRGTYV R E AAGVN KTARG Sbjct: 235 DDLEKRLLQWIKVARARFETTKIGLSGIMIQTQATKFASEMGKKDFTASKGWLHRFLKRYGFKHINLHGEAGDVDKTKYEEQIAKIREQLEGFDVELIFNMDETGLFFRCFPRGTYVTRAEDAAGVNRKTARG 367
BLAST of mRNA_L-elsbetiae_contig16723.4539.1 vs. uniprot
Match: A0A6H5KMN9_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMN9_9PHAE) HSP 1 Score: 179 bits (455), Expect = 1.560e-54 Identity = 90/114 (78.95%), Postives = 99/114 (86.84%), Query Frame = 1 Query: 55 KATKIGVSGSMIQVQATKIAAQMKKTDFKATNGWLHRFLKRYNYTHVNLHGEAGDVDKAKVAEEIERIREQLKEFDVEFIFNMDETGFFYRCFPRGTYVPREETAAGVNSKTAR 396 +AT+IG+SGSMIQ QA KIAAQM KT+FKATNGWLHRFLKR + THV LH EAGDVDK KVAEE +RIREQL+EFDVEF F MDETG F+RCFPRGTYV R E AAG+NSKTAR Sbjct: 73 EATEIGLSGSMIQAQALKIAAQMGKTNFKATNGWLHRFLKRDSSTHVQLH-EAGDVDKQKVAEETKRIREQLQEFDVEFTFKMDETGLFFRCFPRGTYVTRGEAAAGINSKTAR 185
BLAST of mRNA_L-elsbetiae_contig16723.4539.1 vs. uniprot
Match: A0A6H5JWH8_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWH8_9PHAE) HSP 1 Score: 173 bits (438), Expect = 1.410e-52 Identity = 85/105 (80.95%), Postives = 91/105 (86.67%), Query Frame = 1 Query: 85 MIQVQATKIAAQMKKTDFKATNGWLHRFLKRYNYTHVNLHGEAGDVDKAKVAEEIERIREQLKEFDVEFIFNMDETGFFYRCFPRGTYVPREETAAGVNSKTARG 399 MIQ QA KIAAQM KT+FKATNGWLHRFLKRY++THV LHGEAGDVDK KVAEEI+RIREQL+ FDVEFIF MDETG F+R FPRGTYV R E AA VN KTARG Sbjct: 1 MIQAQALKIAAQMGKTNFKATNGWLHRFLKRYSFTHVQLHGEAGDVDKQKVAEEIDRIREQLQVFDVEFIFVMDETGLFFRYFPRGTYVTRGEAAAAVNCKTARG 105
BLAST of mRNA_L-elsbetiae_contig16723.4539.1 vs. uniprot
Match: A0A6H5JT55_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT55_9PHAE) HSP 1 Score: 181 bits (458), Expect = 3.290e-52 Identity = 87/114 (76.32%), Postives = 98/114 (85.96%), Query Frame = 1 Query: 1 DALEEKVRHWFQVARERFKATKIGVSGSMIQVQATKIAAQMKKTDFKATNGWLHRFLKRYNYTHVNLHGEAGDVDKAKVAEEIERIREQLKEFDVEFIFNMDETGFFYRCFPRG 342 D +EEK+R W ++AR RF TKIGVSGSMIQ QA KIAAQM KT+FKAT+GWLHRFL RY++THV LHGEAGDVDK KVAEEIERIREQL+EFDVEFI N+ ET F+RCFPRG Sbjct: 157 DEVEEKLRKWIKIARARFNETKIGVSGSMIQAQALKIAAQMGKTNFKATSGWLHRFLIRYSFTHVQLHGEAGDVDKQKVAEEIERIREQLQEFDVEFILNIVETRLFFRCFPRG 270 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16723.4539.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig16723.4539.1 >prot_L-elsbetiae_contig16723.4539.1 ID=prot_L-elsbetiae_contig16723.4539.1|Name=mRNA_L-elsbetiae_contig16723.4539.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=133bp DALEEKVRHWFQVARERFKATKIGVSGSMIQVQATKIAAQMKKTDFKATNback to top mRNA from alignment at L-elsbetiae_contig16723:1278..1929- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig16723.4539.1 ID=mRNA_L-elsbetiae_contig16723.4539.1|Name=mRNA_L-elsbetiae_contig16723.4539.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=652bp|location=Sequence derived from alignment at L-elsbetiae_contig16723:1278..1929- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig16723:1278..1929- >mRNA_L-elsbetiae_contig16723.4539.1 ID=mRNA_L-elsbetiae_contig16723.4539.1|Name=mRNA_L-elsbetiae_contig16723.4539.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=798bp|location=Sequence derived from alignment at L-elsbetiae_contig16723:1278..1929- (Laminarionema elsbetiae ELsaHSoW15)back to top |