mRNA_L-elsbetiae_contig10455.452.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10455.452.1 vs. uniprot
Match: A0A6H5JBC4_9PHAE (Casein kinase II subunit beta n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBC4_9PHAE) HSP 1 Score: 233 bits (595), Expect = 1.750e-71 Identity = 114/150 (76.00%), Postives = 125/150 (83.33%), Query Frame = 1 Query: 1 LMEATCSLYGLIHARYVLTTAGLEAMYAKYTLQEFGNCPHFLCRGQSVVPLGVRDEPQMETVKLFCPKCQDVYVHPSHAAQSELIPFLLRVDGAYFGTTFPHLFFMTYKGLVPDPPERTFVPRVFGFRVHARNLSGGGAPARGQGEQHEQ 450 LMEATC+LYGLIHARYVLT AGLEAMYAKYTLQEFGNCPHFLC+ QSVVPLGVRDEP +ETVKL+CPKCQ+VYVHPSHAAQ RVDGAYFGTTFPHLFFMTY LVPDP ++TFVPRVFGFRVH+ +G A G+ H+Q Sbjct: 70 LMEATCALYGLIHARYVLTAAGLEAMYAKYTLQEFGNCPHFLCKRQSVVPLGVRDEPHIETVKLYCPKCQNVYVHPSHAAQ--------RVDGAYFGTTFPHLFFMTYGTLVPDPLDKTFVPRVFGFRVHSTAPNGASA----SGDHHDQ 207
BLAST of mRNA_L-elsbetiae_contig10455.452.1 vs. uniprot
Match: D8LK36_ECTSI (Casein kinase II subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK36_ECTSI) HSP 1 Score: 168 bits (426), Expect = 1.070e-50 Identity = 77/83 (92.77%), Postives = 81/83 (97.59%), Query Frame = 1 Query: 1 LMEATCSLYGLIHARYVLTTAGLEAMYAKYTLQEFGNCPHFLCRGQSVVPLGVRDEPQMETVKLFCPKCQDVYVHPSHAAQSE 249 LMEATC+LYGLIHARYVLT AGLEAMYAKYTLQEFGNCPHFLC+GQSVVPLGVRDEP +ETVKL+CPKCQDVYVHPSHAAQSE Sbjct: 70 LMEATCALYGLIHARYVLTAAGLEAMYAKYTLQEFGNCPHFLCKGQSVVPLGVRDEPHIETVKLYCPKCQDVYVHPSHAAQSE 152
BLAST of mRNA_L-elsbetiae_contig10455.452.1 vs. uniprot
Match: B8BZE6_THAPS (Casein kinase II subunit beta (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZE6_THAPS) HSP 1 Score: 155 bits (392), Expect = 2.290e-45 Identity = 73/132 (55.30%), Postives = 93/132 (70.45%), Query Frame = 1 Query: 1 LMEATCSLYGLIHARYVLTTAGLEAMYAKYTLQEFGNCPHFLCRGQSVVPLGVRDEPQMETVKLFCPKCQDVYVHPSHAAQSELIPFLLRVDGAYFGTTFPHLFFMTYKGLVPDP--PERTFVPRVFGFRVH 390 L ++ C+LYGLIHARY++T GL++MY KY +EFG CP C GQ V+P+GV+DE ++TVK+FCPKC+ VY P +S VDGA FGTTFPHLF MT+ LVPDP + ++PRVFGFRVH Sbjct: 55 LTQSACTLYGLIHARYIVTAHGLDSMYNKYASKEFGTCPLVQCNGQPVLPVGVKDEIGVDTVKIFCPKCKSVYQPPPIRTRST-------VDGAAFGTTFPHLFLMTFNNLVPDPLPSDSAYIPRVFGFRVH 179
BLAST of mRNA_L-elsbetiae_contig10455.452.1 vs. uniprot
Match: A0A7S1BKM1_9STRA (Casein kinase II subunit beta n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BKM1_9STRA) HSP 1 Score: 157 bits (397), Expect = 1.920e-44 Identity = 75/132 (56.82%), Postives = 94/132 (71.21%), Query Frame = 1 Query: 1 LMEATCSLYGLIHARYVLTTAGLEAMYAKYTLQEFGNCPHFLCRGQSVVPLGVRDEPQMETVKLFCPKCQDVYVHPSHAAQSELIPFLLRVDGAYFGTTFPHLFFMTYKGLVPDP--PERTFVPRVFGFRVH 390 L + C+LYGLIHARY++T GL+AMY KY ++FG CP C GQ V+P+G+RDE ++VK+FCPKCQ VY P + +S VDGA FGTTFPHLF MT+ LVPDP P+ T++PRVFGFRVH Sbjct: 75 LTQNACTLYGLIHARYIITAHGLDAMYNKYASKDFGTCPLVQCCGQPVLPVGLRDEVGYDSVKVFCPKCQKVYNPPPASRRSGSF-----VDGAAFGTTFPHLFLMTFSNLVPDPLPPDSTYIPRVFGFRVH 201
BLAST of mRNA_L-elsbetiae_contig10455.452.1 vs. uniprot
Match: A0A7S1ZP41_TRICV (Casein kinase II subunit beta n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZP41_TRICV) HSP 1 Score: 157 bits (397), Expect = 7.220e-44 Identity = 77/138 (55.80%), Postives = 93/138 (67.39%), Query Frame = 1 Query: 1 LMEATCSLYGLIHARYVLTTAGLEAMYAKYTLQEFGNCPHFLCRGQSVVPLGVRDEPQMETVKLFCPKCQDVYVHP------SHAAQSELIPFLLRVDGAYFGTTFPHLFFMTYKGLVPDP--PERTFVPRVFGFRVH 390 L ++ C+LYGLIHARY++T GL+AMY KY +EFG CP C GQ V+P+G++DE ++TVK+FCPKCQ VY P SH VDGA FGTTFPHLF MT+ LVPDP P +VPRVFGFRVH Sbjct: 74 LTQSACTLYGLIHARYIITAHGLDAMYNKYAAKEFGTCPLIQCNGQPVLPVGLKDEMGVDTVKIFCPKCQCVYHPPPIRSRSSHHGPGGSAAGSGAVDGAAFGTTFPHLFLMTFNNLVPDPLDPASAYVPRVFGFRVH 211
BLAST of mRNA_L-elsbetiae_contig10455.452.1 vs. uniprot
Match: A0A7S2SMC8_9STRA (Casein kinase II subunit beta (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SMC8_9STRA) HSP 1 Score: 154 bits (389), Expect = 1.240e-43 Identity = 75/132 (56.82%), Postives = 94/132 (71.21%), Query Frame = 1 Query: 1 LMEATCSLYGLIHARYVLTTAGLEAMYAKYTLQEFGNCPHFLCRGQSVVPLGVRDEPQMETVKLFCPKCQDVYVHPSHAAQSELIPFLLRVDGAYFGTTFPHLFFMTYKGLVPDPPERT--FVPRVFGFRVH 390 LM A+ LYGLIHARY++ +AGLEAM KYT+ EFG CP + C+ Q VVPLG+ D + E VK++CP+C+ VY P ++P VDGAYFGTTFPHL FMTY+ L+P+P E FVPR+FGFRVH Sbjct: 96 LMLASFVLYGLIHARYIVCSAGLEAMLRKYTMAEFGWCPRYFCQRQPVVPLGLSDRLRQEVVKIYCPRCRQVYDPP-------VMPGQAAVDGAYFGTTFPHLLFMTYEVLLPEPTESNLVFVPRIFGFRVH 220
BLAST of mRNA_L-elsbetiae_contig10455.452.1 vs. uniprot
Match: A0A448YXJ5_9STRA (Casein kinase II subunit beta n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YXJ5_9STRA) HSP 1 Score: 154 bits (389), Expect = 2.610e-43 Identity = 80/147 (54.42%), Postives = 100/147 (68.03%), Query Frame = 1 Query: 1 LMEATCSLYGLIHARYVLTTAGLEAMYAKYTLQEFGNCPHFLCRGQSVVPLGVRDEPQMETVKLFCPKCQDVYVHPSHAAQSELI--PFLLRVDGAYFGTTFPHLFFMTYKGLVPDP--PERTFVPRVFGFRVH--ARNLSGGGAPA 423 L ++ C+LYGLIHARY++T GL+AMY KY +EFG CP C GQ V+P+G++DE +TVK+FCPKCQ VY P ++S VDGA FGTTFPHLF MT+ LVPDP + +VPRVFGFRVH AR + GG+ A Sbjct: 74 LTQSACTLYGLIHARYIITAHGLDAMYNKYASKEFGTCPLVQCAGQPVLPVGLKDEMGADTVKIFCPKCQCVYHPPPVRSRSSHHGPAGAAGVDGAAFGTTFPHLFLMTFSNLVPDPLPADSAYVPRVFGFRVHMSARQRTIGGSNA 220
BLAST of mRNA_L-elsbetiae_contig10455.452.1 vs. uniprot
Match: A0A835ZJS8_9STRA (Casein kinase II subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJS8_9STRA) HSP 1 Score: 150 bits (380), Expect = 3.960e-43 Identity = 75/132 (56.82%), Postives = 96/132 (72.73%), Query Frame = 1 Query: 1 LMEATCSLYGLIHARYVLTTAGLEAMYAKYTLQEFGNCPHFLCRGQSVVPLGVRDEPQMETVKLFCPKCQDVYVH--PSHAAQSELIPFLLRVDGAYFGTTFPHLFFMTYKGLVPDPPERTFVPRVFGFRVH 390 L++++ LYGLIHARY++TT GLEAM K+ +Q+FG CP LCR +VVP+G+RDEP++E VKLFCP CQDVY PS + Q++L DGAYFGTTF HLF MTY+ P E +VPR+FGFR+H Sbjct: 71 LLQSSYMLYGLIHARYIITTNGLEAMRKKHAMQDFGCCPRMLCRASAVVPIGMRDEPKLEGVKLFCPSCQDVYAPWAPS-SPQAQL-------DGAYFGTTFAHLFCMTYEITAPTAKE-LYVPRIFGFRIH 193
BLAST of mRNA_L-elsbetiae_contig10455.452.1 vs. uniprot
Match: A0A7R9W3V5_9STRA (Casein kinase II subunit beta (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W3V5_9STRA) HSP 1 Score: 155 bits (391), Expect = 5.490e-43 Identity = 76/138 (55.07%), Postives = 94/138 (68.12%), Query Frame = 1 Query: 1 LMEATCSLYGLIHARYVLTTAGLEAMYAKYTLQEFGNCPHFLCRGQSVVPLGVRDEPQMETVKLFCPKCQDVYVHP------SHAAQSELIPFLLRVDGAYFGTTFPHLFFMTYKGLVPDPPER--TFVPRVFGFRVH 390 L ++ C+LYGLIHARY++T GL+AMY KY +EFG CP C GQ V+P+G++DE ++TVK+FCPKCQ VY P SH VDGA FGTTFPHLF MT+ LVPDP ++ +VPRVFGFRVH Sbjct: 146 LTQSACTLYGLIHARYIITAHGLDAMYNKYAAKEFGTCPLIQCNGQPVLPVGLKDEMGVDTVKIFCPKCQCVYHPPPIRSRSSHHGPGGSAGGSGSVDGAAFGTTFPHLFLMTFNNLVPDPLDQQSAYVPRVFGFRVH 283
BLAST of mRNA_L-elsbetiae_contig10455.452.1 vs. uniprot
Match: A0A7S3PDD2_9STRA (Casein kinase II subunit beta n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PDD2_9STRA) HSP 1 Score: 155 bits (391), Expect = 8.460e-43 Identity = 73/132 (55.30%), Postives = 95/132 (71.97%), Query Frame = 1 Query: 1 LMEATCSLYGLIHARYVLTTAGLEAMYAKYTLQEFGNCPHFLCRGQSVVPLGVRDEPQMETVKLFCPKCQDVYVHPSHAAQSELIPFLLRVDGAYFGTTFPHLFFMTYKGLVPDP--PERTFVPRVFGFRVH 390 L ++ C+LYGLIHARY++T GL+AMY KY ++FG CP C GQ V+P+G++DE ++TVK+FCPKC VY P +++ + VDGA FGTTFPHLF MT+ LVPDP E ++VPRVFGFRVH Sbjct: 107 LTQSACTLYGLIHARYIITAHGLDAMYNKYAAKDFGTCPLVQCSGQPVLPVGLKDEMGVDTVKIFCPKCTQVYHTPPLRSRANVST---GVDGAAFGTTFPHLFLMTFSNLVPDPLPVESSYVPRVFGFRVH 235 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10455.452.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10455.452.1 >prot_L-elsbetiae_contig10455.452.1 ID=prot_L-elsbetiae_contig10455.452.1|Name=mRNA_L-elsbetiae_contig10455.452.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=149bp MEATCSLYGLIHARYVLTTAGLEAMYAKYTLQEFGNCPHFLCRGQSVVPLback to top mRNA from alignment at L-elsbetiae_contig10455:669..1706+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10455.452.1 ID=mRNA_L-elsbetiae_contig10455.452.1|Name=mRNA_L-elsbetiae_contig10455.452.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1038bp|location=Sequence derived from alignment at L-elsbetiae_contig10455:669..1706+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10455:669..1706+ >mRNA_L-elsbetiae_contig10455.452.1 ID=mRNA_L-elsbetiae_contig10455.452.1|Name=mRNA_L-elsbetiae_contig10455.452.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=894bp|location=Sequence derived from alignment at L-elsbetiae_contig10455:669..1706+ (Laminarionema elsbetiae ELsaHSoW15)back to top |