mRNA_L-elsbetiae_contig10.45.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig10.45.1
Unique NamemRNA_L-elsbetiae_contig10.45.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig10.45.1 vs. uniprot
Match: A0A6G6D7D1_ECTSI (Cytochrome c biogenesis protein CcsA n=7 Tax=Ectocarpales TaxID=2877 RepID=A0A6G6D7D1_ECTSI)

HSP 1 Score: 592 bits (1525), Expect = 1.080e-212
Identity = 289/324 (89.20%), Postives = 316/324 (97.53%), Query Frame = 1
Query:    1 MSIISENINLINNSVFVSCFLCTCAYWSILSMRDTKILRTLAKITSRFATVSIFLFLTDRWVEFGYFPLSNLYESLLFLSCLLLFVYQILEYKIQSPIFGGIILPIVLFITAFAAFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLIAGSSLAILYLVVFLEYEEYVRTMPMRNAAYEKSIRQDLGLKSREEYLNLGLDLIYKEEQDIVLNIRTNFLYHIDSWSFRSISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLNFAAYLHIRLIIGLNGKLPALLASLGFFVVWVCYLGVNFLGQGLHSYGWFI 972
            MSI+SENI+L++NSVF+SCF+CT AYWSI+SMRDTKILR +AKITSRFAT+S+F+ L DRW+EFGYFPLSNLYESLLFLSCLLLFVYQ+LEYKIQSP+FGGIILPIVLFITAFA FKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLL+ GSSLAILYLVVFLE+E+YVRTMP+R AAYEKSIR+DLGLKSREEYLNLGL LIYKEEQDIVLNIRTNFLY+IDSWSFRSISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLNFAAYLH+RLI+GLNGK+PA++ASLGFFVVW+CYLGVNFLGQGLHSYGWF+
Sbjct:    1 MSIVSENISLVSNSVFISCFVCTSAYWSIISMRDTKILRDIAKITSRFATLSLFVLLADRWIEFGYFPLSNLYESLLFLSCLLLFVYQVLEYKIQSPVFGGIILPIVLFITAFAVFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLMVGSSLAILYLVVFLEFEDYVRTMPLRTAAYEKSIRRDLGLKSREEYLNLGLHLIYKEEQDIVLNIRTNFLYNIDSWSFRSISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLNFAAYLHVRLIVGLNGKIPAIIASLGFFVVWICYLGVNFLGQGLHSYGWFV 324          
BLAST of mRNA_L-elsbetiae_contig10.45.1 vs. uniprot
Match: A0A1I9LVC5_9PHAE (Cytochrome c biogenesis protein CcsA n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVC5_9PHAE)

HSP 1 Score: 569 bits (1467), Expect = 7.420e-204
Identity = 280/324 (86.42%), Postives = 308/324 (95.06%), Query Frame = 1
Query:    1 MSIISENINLINNSVFVSCFLCTCAYWSILSMRDTKILRTLAKITSRFATVSIFLFLTDRWVEFGYFPLSNLYESLLFLSCLLLFVYQILEYKIQSPIFGGIILPIVLFITAFAAFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLIAGSSLAILYLVVFLEYEEYVRTMPMRNAAYEKSIRQDLGLKSREEYLNLGLDLIYKEEQDIVLNIRTNFLYHIDSWSFRSISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLNFAAYLHIRLIIGLNGKLPALLASLGFFVVWVCYLGVNFLGQGLHSYGWFI 972
            MS++SEN+NL+NNSVFVSCFLCT AYWSI+ M+DT+ILRT+AK+TSRFATVSIF+ LTDRW+EFGYFPLSNLYESLLFL+CLLLFVYQ+LEYKIQSPIFGGIILPIVLFITAF  F LPL MQKASALVPALQSNWLMMHVSLMMLSYSLLI GSSLAILYLV FLE+E Y+RTMP+R A YEK +++ LGLK+R+E+L LGL LIYKEEQDIVLNIRTNFLY+IDSWSFRSISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLNFAAYLH+RLI+GLNGK+PA++ASLGFFVVWVCYLGVNFLGQGLHSYGWFI
Sbjct:    1 MSLVSENLNLVNNSVFVSCFLCTLAYWSIIYMKDTQILRTIAKLTSRFATVSIFILLTDRWIEFGYFPLSNLYESLLFLACLLLFVYQVLEYKIQSPIFGGIILPIVLFITAFTIFNLPLAMQKASALVPALQSNWLMMHVSLMMLSYSLLIIGSSLAILYLVGFLEFENYIRTMPIREAEYEKVMQRILGLKNRKEHLRLGLHLIYKEEQDIVLNIRTNFLYNIDSWSFRSISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLNFAAYLHVRLIVGLNGKMPAIIASLGFFVVWVCYLGVNFLGQGLHSYGWFI 324          
BLAST of mRNA_L-elsbetiae_contig10.45.1 vs. uniprot
Match: A0A6B7IK16_9PHAE (Cytochrome c biogenesis protein CcsA n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7IK16_9PHAE)

HSP 1 Score: 558 bits (1439), Expect = 1.370e-199
Identity = 274/324 (84.57%), Postives = 304/324 (93.83%), Query Frame = 1
Query:    1 MSIISENINLINNSVFVSCFLCTCAYWSILSMRDTKILRTLAKITSRFATVSIFLFLTDRWVEFGYFPLSNLYESLLFLSCLLLFVYQILEYKIQSPIFGGIILPIVLFITAFAAFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLIAGSSLAILYLVVFLEYEEYVRTMPMRNAAYEKSIRQDLGLKSREEYLNLGLDLIYKEEQDIVLNIRTNFLYHIDSWSFRSISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLNFAAYLHIRLIIGLNGKLPALLASLGFFVVWVCYLGVNFLGQGLHSYGWFI 972
            MSIISE+INL +NS+FVSCF  T AYW+ILSM+D+ ILRT+ KITSRFAT+SIF+ LTDRWVEFGYFPLSNLYESLLFLSCLLLFVYQ+LEYKIQ+P+FGGIILPIVLFITAFA FKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLI GSSLAILYLV+FLE+EEY+R MP+R  AYEKS+R++LGLK+REEYL LGLD IY +EQ  +L IRT FLY+IDSWSFRSISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLNFAAYLH+RLI+GLNG+ P+L+ASLGFFVVW+CYLGVNFLGQGLHSYGWF+
Sbjct:    1 MSIISEHINLFSNSIFVSCFFSTLAYWTILSMKDSNILRTIGKITSRFATLSIFILLTDRWVEFGYFPLSNLYESLLFLSCLLLFVYQVLEYKIQTPVFGGIILPIVLFITAFAVFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLIVGSSLAILYLVLFLEFEEYIRMMPIRKIAYEKSVRKELGLKTREEYLRLGLDRIYIDEQATILKIRTTFLYNIDSWSFRSISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLNFAAYLHVRLIVGLNGRFPSLIASLGFFVVWICYLGVNFLGQGLHSYGWFM 324          
BLAST of mRNA_L-elsbetiae_contig10.45.1 vs. uniprot
Match: A0A8F0F9V5_9PHAE (Cytochrome c biogenesis protein CcsA n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9V5_9PHAE)

HSP 1 Score: 474 bits (1219), Expect = 4.980e-166
Identity = 232/318 (72.96%), Postives = 276/318 (86.79%), Query Frame = 1
Query:   16 ENINLINNSVFVSCFLCTCAYWSILSMRDTKILRTLAKITSRFATVSIFLFLTDRWVEFGYFPLSNLYESLLFLSCLLLFVYQILEYKIQSPIFGGIILPIVLFITAFAAFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLIAGSSLAILYLVVFLEYEEYVRTMPMRNAAYEKSIRQDLGLKSREEYLNLGLDLIYKEEQDIVLNIRTNFLYHIDSWSFRSISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLNFAAYLHIRLIIGLNGKLPALLASLGFFVVWVCYLGVNFLGQGLHSYGWF 969
             N +  NN +F+SC + T  YW  L  ++ KI  +LAK+TSRFA++ +F+FL++RW+E GYFPLSNLYESLLFLSC+LLFVYQILEYK QS +FG II+PIVLFIT FAA  LPLEMQKA+ALVPALQSNWLMMHVSLMMLSY++LI GS+ +I+Y+  FLE E+Y++T+P+R A YEK IR+ L L +R ++L LGLD+IY EE+DIV+N RT FLYHID+WS+R+ISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWL FAAYLH+RLI+GLNGK PALLAS+GFFVVW+CYLGVNFLGQGLHSYGWF
Sbjct:   11 SNSSTFNNILFISCLVSTVFYWFSLGFKNIKIFGSLAKVTSRFASLILFVFLSNRWLESGYFPLSNLYESLLFLSCILLFVYQILEYKTQSSLFGCIIVPIVLFITGFAALTLPLEMQKANALVPALQSNWLMMHVSLMMLSYAILIMGSAFSIVYVGAFLELEDYIKTIPVRAAEYEKQIRKSLNL-TRSQFLYLGLDVIYNEEEDIVINNRTKFLYHIDNWSYRAISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLIFAAYLHLRLIVGLNGKKPALLASIGFFVVWICYLGVNFLGQGLHSYGWF 327          
BLAST of mRNA_L-elsbetiae_contig10.45.1 vs. uniprot
Match: A0A516ICR2_9PHAE (Cytochrome c biogenesis protein CcsA n=27 Tax=Laminariales TaxID=2886 RepID=A0A516ICR2_9PHAE)

HSP 1 Score: 467 bits (1202), Expect = 1.920e-163
Identity = 231/315 (73.33%), Postives = 272/315 (86.35%), Query Frame = 1
Query:   25 NLINNSVFVSCFLCTCAYWSILSMRDTKILRTLAKITSRFATVSIFLFLTDRWVEFGYFPLSNLYESLLFLSCLLLFVYQILEYKIQSPIFGGIILPIVLFITAFAAFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLIAGSSLAILYLVVFLEYEEYVRTMPMRNAAYEKSIRQDLGLKSREEYLNLGLDLIYKEEQDIVLNIRTNFLYHIDSWSFRSISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLNFAAYLHIRLIIGLNGKLPALLASLGFFVVWVCYLGVNFLGQGLHSYGWF 969
            N+ NN +F  C + T  YW  L  ++ K+  TLAKITSRFAT+S+F+FL +RW++FGYFPLSNLYESLLFLSC+LLFV Q LE K QS +FG II+PIVLFIT FAA  LPLEMQKASALVPALQSNWLMMHVSLMMLSY++LI GSS AI+Y+  FLE E+Y++T+P+R A YEK +R+ L L ++ ++L LGLD+IY EE+DIV+N RT FLY+ID+WS+R+ISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWL FAAYLH+RLI+GLNGK PALLAS+GFFVVW+CYLGVNFLGQGLHSYGWF
Sbjct:   14 NIFNNILFACCLVSTIFYWFSLGFKNIKVFSTLAKITSRFATLSLFVFLLNRWIQFGYFPLSNLYESLLFLSCILLFVSQALESKTQSLLFGCIIVPIVLFITGFAALTLPLEMQKASALVPALQSNWLMMHVSLMMLSYAILIIGSSFAIVYVGSFLELEDYIKTIPVRAAEYEKHMRKTLNL-TKSQFLYLGLDVIYNEEEDIVINNRTKFLYNIDNWSYRAISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLIFAAYLHLRLIVGLNGKKPALLASIGFFVVWICYLGVNFLGQGLHSYGWF 327          
BLAST of mRNA_L-elsbetiae_contig10.45.1 vs. uniprot
Match: A0A2R4QPY5_9PHAE (Cytochrome c biogenesis protein CcsA n=4 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QPY5_9PHAE)

HSP 1 Score: 401 bits (1030), Expect = 4.610e-137
Identity = 209/339 (61.65%), Postives = 256/339 (75.52%), Query Frame = 1
Query:   10 ISENI-NLINNSVFVSCFLCTCAYWSILSMRDTKILRTLAKITSRFATVSIFLFLTDRWVEFGYFPLSNLYESLLFLSCLLLFVYQILEYKIQSPIFGGIILPIVLFITAFAAFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLIAGSSLAILYLVVFLEYEEYVRTMPMRNAAYEKSIRQDLGLK-----SREEYLN-------------LGLDLIYKEEQDIVLNIRTNFLYHIDSWSFRSISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLNFAAYLHIRLIIGLNGKLPALLASLGFFVVWVCYLGVNFLGQGLHSYGWF 969
            +SEN  NL+NNS+F+  F+ T  YW  LS +   I  T+ KITSRFAT+SIFLFL  RW+++GYFPLSNLYESLLFLS +LLF+YQ LE K QSPIFGGI+LP+VL I+ F+   LPLEMQKASALVPALQSNWLMMHVSLMMLSY++L+ GS+ +I+YLV  + +   + ++  R   Y++ +R  +        +RE+Y               + L+ I+ E++ +  + RTNFL  +D WS R+ISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWL FAAYLH+RLI+G+ GK PA LASL FFVVW+CYLGVNFLGQGLHSYGWF
Sbjct:    2 LSENYCNLLNNSLFILVFISTALYWFRLSFKSITIFNTIGKITSRFATLSIFLFLLIRWIDYGYFPLSNLYESLLFLSFILLFLYQFLESKAQSPIFGGIVLPLVLLISGFSELTLPLEMQKASALVPALQSNWLMMHVSLMMLSYAILLIGSAFSIVYLVTSIVFLYNLESVEKRYFDYQEFMRGLINFTRGMNLTREDYQTRSSIQSPSACCQIISLNNIFLEQEALAQSARTNFLSQLDKWSSRTISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLIFAAYLHLRLIVGVTGKGPACLASLAFFVVWICYLGVNFLGQGLHSYGWF 340          
BLAST of mRNA_L-elsbetiae_contig10.45.1 vs. uniprot
Match: A0A1L2F1W2_9PHAE (Cytochrome c biogenesis protein CcsA n=13 Tax=Sargassaceae TaxID=3014 RepID=A0A1L2F1W2_9PHAE)

HSP 1 Score: 395 bits (1015), Expect = 8.750e-135
Identity = 211/339 (62.24%), Postives = 250/339 (73.75%), Query Frame = 1
Query:   13 SEN-INLINNSVFVSCFLCTCAYWSILSMRDTKILRTLAKITSRFATVSIFLFLTDRWVEFGYFPLSNLYESLLFLSCLLLFVYQILEYKIQSPIFGGIILPIVLFITAFAAFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLIAGSSLAILYLVVFLEYEEYVRTMPMRNAAYEKSIRQDLGLK-----SREEYLN-------------LGLDLIYKEEQDIVLNIRTNFLYHIDSWSFRSISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLNFAAYLHIRLIIGLNGKLPALLASLGFFVVWVCYLGVNFLGQGLHSYGWFI 972
            SEN  NL+NN +F   F+ T  YW  LS +   I   + +ITSRFAT++IFLFL  RWVE+GYFPLSNLYESLLFLS +LLF YQ LE K +SPIFGGIILPIVL I+ FA   LPLEMQKA ALVPALQSNWLMMHVSLMMLSY++L+ GS+ +I+YLV  L +   +R    R   Y++ +R  + L      +RE+Y               + L+ I+ E++    + RTNFL  +D WS R+ISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWL FAAYLH+RLI+G+ GK PA LAS+ FFVVWVCYLGVNFLGQGLHSYGWF+
Sbjct:    3 SENYFNLLNNILFFLVFISTAIYWFRLSFKFVTIFNIIGEITSRFATINIFLFLLIRWVEYGYFPLSNLYESLLFLSFILLFSYQFLESKAKSPIFGGIILPIVLLISGFAELTLPLEMQKAGALVPALQSNWLMMHVSLMMLSYAILLIGSAFSIVYLVTLLVFSYTIRPFEKRYFDYQEFMRGLVNLAKGMTLTREDYKIRSSIQSAYACPEIISLNNIFLEQEAFAESARTNFLSQLDKWSSRTISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLIFAAYLHLRLIVGVTGKGPAFLASIAFFVVWVCYLGVNFLGQGLHSYGWFM 341          
BLAST of mRNA_L-elsbetiae_contig10.45.1 vs. uniprot
Match: A0A8F0FAP1_9PHAE (Cytochrome c biogenesis protein CcsA n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAP1_9PHAE)

HSP 1 Score: 376 bits (966), Expect = 1.300e-127
Identity = 193/318 (60.69%), Postives = 242/318 (76.10%), Query Frame = 1
Query:   25 NLINNSVFVSCFLCTCAYWSILSMRDTKILRTLAKITSRFATVSIFLFLTDRWVEFGYFPLSNLYESLLFLSCLLLFVYQILEYKIQSPIFGGIILPIVLFITAFAAFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLIAGSSLAILYLVVFLEYEEYVRTMPMRNAAYEKSIRQDLGLKSREEYLNLGLDLIYK----EEQDIVLNIRTNFLYHIDSWSFRSISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLNFAAYLHIRLIIGLNGKLPALLASLGFFVVWVCYLGVNFLGQGLHSYGW 966
            N  +NS+F+   + T  YW  L           AK+ SR AT+ +F+FL  RW++ GYFPLSNLYESLLFLSC++LFVYQ +EYK +S IFG I+LP+VLFIT FA   LPLEM+KASALVPALQSNWLMMHVSLMMLSY++LI GS ++IL+L++FL   +          +YE+  R +  ++ R+ Y N+ LD + K    +++++  + +  FLY++D+W +R+ISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWL FAAYLH+RLI G  GK PA+LAS+GFFVVW+CYLGVNFLGQGLHSYGW
Sbjct:    8 NFFSNSIFIFLLISTVFYWFSLRFTKVDFYYKFAKLNSRVATIILFVFLLSRWIQNGYFPLSNLYESLLFLSCIILFVYQFIEYKTKSKIFGAILLPLVLFITGFADLTLPLEMRKASALVPALQSNWLMMHVSLMMLSYAILIVGSLVSILFLIIFLSLSKDSEISFTSYGSYEEYARAE-NIEIRDLY-NVFLDPLDKMSASKQKELRESRKLEFLYNLDNWGYRTISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLIFAAYLHLRLIKGWVGKGPAILASIGFFVVWICYLGVNFLGQGLHSYGW 323          
BLAST of mRNA_L-elsbetiae_contig10.45.1 vs. uniprot
Match: A0A8F0F862_9PHAE (Cytochrome c biogenesis protein CcsA n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F862_9PHAE)

HSP 1 Score: 374 bits (961), Expect = 8.550e-127
Identity = 197/327 (60.24%), Postives = 246/327 (75.23%), Query Frame = 1
Query:   25 NLINNSVFVSCFLCTCAYWSILSMRDTKILRTLAKITSRFATVSIFLFLTDRWVEFGYFPLSNLYESLLFLSCLLLFVYQILEYKIQSPIFGGIILPIVLFITAFAAFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLIAGSSLAILYLVVFLEYEEYVRTMPMRNAAYEK---SIRQDLGLKSREE---YLNL------GLDLIYKEEQDIVLNI-RTNFLYHIDSWSFRSISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLNFAAYLHIRLIIGLNGKLPALLASLGFFVVWVCYLGVNFLGQGLHSYGW 966
            N+  NS+F+  F+ +  YW  L +   K+L T+AK T+R A +S+F+FL  RW  +GYFPLSNLYESLLFL+CLL  V+QILEY+ QS  FG IILPI+LFIT+FA   LPLEMQKASALVPALQSNWLMMHVSLMMLSY++L+ GS  +I++L+ FL        +P  +++  K   S + ++ LK  E+   YLN       G+ +    ++   LN+ +  FL  +D+WS+R+ISLGFP LTIGIIAGAVWANEAWGSYWSWDPKETWALITWL FAAYLH+RLI+G +GK PA+LASLGFFVVW+CYLGVNFLGQGLH+YGW
Sbjct:    8 NIFKNSLFICLFISSIFYWVSLRITKFKMLYTVAKFTARIANLSLFIFLATRWGNYGYFPLSNLYESLLFLACLLSLVHQILEYQTQSKFFGTIILPIILFITSFADLTLPLEMQKASALVPALQSNWLMMHVSLMMLSYAILLLGSLFSIIFLITFLP-------LPKESSSITKDFFSTQSEIALKIEEDFQKYLNSNSVEAGGIQINESIQKYYDLNLLKIKFLITLDNWSYRTISLGFPLLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLVFAAYLHVRLIVGWSGKGPAILASLGFFVVWICYLGVNFLGQGLHTYGW 327          
BLAST of mRNA_L-elsbetiae_contig10.45.1 vs. uniprot
Match: A0A2I4Q2E4_9PHAE (Cytochrome c biogenesis protein CcsA n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2E4_9PHAE)

HSP 1 Score: 355 bits (911), Expect = 1.790e-119
Identity = 188/312 (60.26%), Postives = 226/312 (72.44%), Query Frame = 1
Query:   37 NSVFVSCFLCTCAYWSILSMRDTKILRTLAKITSRFATVSIFLFLTDRWVEFGYFPLSNLYESLLFLSCLLLFVYQILEYKIQSPIFGGIILPIVLFITAFAAFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSLLIAGSSLAILYLVVFL--EYEEYVRTMPMRNAAYEKSIRQDLGLKSREEYLNLGLDLIYKEEQDIVLNIRTNFLYHIDSWSFRSISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLNFAAYLHIRLIIGLNGKLPALLASLGFFVVWVCYLGVNFLGQGLHSYGW 966
            N +F   F  T  YW  L  +  K L   A+I S FAT  +F FL +RWV +GYFP+SNLYESLLFLSCLLL ++QILEY+ QS IFG ++LP +LFIT+FA   LPLEMQKA+ALVP+LQSNWLMMHVSLM+LSY++L+ GS  +I++LV+FL  E +  +          +KSI     +K+ E Y+                   T FL+ +D+WS++ ISLGFP LTIGIIAGAVWANEAWGSYWSWDPKETWALITWL FAAYLHIRLI G +GK PA+LASLGFF +WVCYLGVNFLGQGLHSYGW
Sbjct:   12 NILFFCLFSSTIFYWFSLKFQILKKLHDFARINSIFATFLLFFFLLNRWVTYGYFPISNLYESLLFLSCLLLIIHQILEYQTQSRIFGALLLPSILFITSFADLTLPLEMQKATALVPSLQSNWLMMHVSLMLLSYAILLLGSLFSIIFLVLFLPSERKNEINDKLKIKTITKKSIFAFYNIKAFEPYIP-----------------STEFLFILDNWSYKMISLGFPLLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLVFAAYLHIRLIKGWSGKGPAILASLGFFFIWVCYLGVNFLGQGLHSYGW 306          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10.45.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6G6D7D1_ECTSI1.080e-21289.20Cytochrome c biogenesis protein CcsA n=7 Tax=Ectoc... [more]
A0A1I9LVC5_9PHAE7.420e-20486.42Cytochrome c biogenesis protein CcsA n=1 Tax=Pleur... [more]
A0A6B7IK16_9PHAE1.370e-19984.57Cytochrome c biogenesis protein CcsA n=1 Tax=Clado... [more]
A0A8F0F9V5_9PHAE4.980e-16672.96Cytochrome c biogenesis protein CcsA n=1 Tax=Chord... [more]
A0A516ICR2_9PHAE1.920e-16373.33Cytochrome c biogenesis protein CcsA n=27 Tax=Lami... [more]
A0A2R4QPY5_9PHAE4.610e-13761.65Cytochrome c biogenesis protein CcsA n=4 Tax=Fucac... [more]
A0A1L2F1W2_9PHAE8.750e-13562.24Cytochrome c biogenesis protein CcsA n=13 Tax=Sarg... [more]
A0A8F0FAP1_9PHAE1.300e-12760.69Cytochrome c biogenesis protein CcsA n=1 Tax=Desma... [more]
A0A8F0F862_9PHAE8.550e-12760.24Cytochrome c biogenesis protein CcsA n=1 Tax=Proto... [more]
A0A2I4Q2E4_9PHAE1.790e-11960.26Cytochrome c biogenesis protein CcsA n=1 Tax=Dicty... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10contigL-elsbetiae_contig10:85959..86933 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score590.5
Seed ortholog evalue4.8e-166
Seed eggNOG ortholog2880.D1J757
Preferred nameccsA
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006810,GO:0008150,GO:0008152,GO:0009536,GO:0015886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0051179,GO:0051181,GO:0051234,GO:0055114,GO:0071702,GO:0071705,GO:1901678
EggNOG free text desc.cytochrome complex assembly
EggNOG OGs2QU0T@2759,COG0755@1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons1
Model size975
Cds size975
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815233.4895997-CDS-L-elsbetiae_contig10:85958..869331622815233.4895997-CDS-L-elsbetiae_contig10:85958..86933Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10 85959..86933 -
1691682784.6787934-CDS-L-elsbetiae_contig10:85958..869331691682784.6787934-CDS-L-elsbetiae_contig10:85958..86933Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10 85959..86933 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10.45.1prot_L-elsbetiae_contig10.45.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig10 85959..86933 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig10.45.1

>prot_L-elsbetiae_contig10.45.1 ID=prot_L-elsbetiae_contig10.45.1|Name=mRNA_L-elsbetiae_contig10.45.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=325bp
MSIISENINLINNSVFVSCFLCTCAYWSILSMRDTKILRTLAKITSRFAT
VSIFLFLTDRWVEFGYFPLSNLYESLLFLSCLLLFVYQILEYKIQSPIFG
GIILPIVLFITAFAAFKLPLEMQKASALVPALQSNWLMMHVSLMMLSYSL
LIAGSSLAILYLVVFLEYEEYVRTMPMRNAAYEKSIRQDLGLKSREEYLN
LGLDLIYKEEQDIVLNIRTNFLYHIDSWSFRSISLGFPFLTIGIIAGAVW
ANEAWGSYWSWDPKETWALITWLNFAAYLHIRLIIGLNGKLPALLASLGF
FVVWVCYLGVNFLGQGLHSYGWFI*
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mRNA from alignment at L-elsbetiae_contig10:85959..86933-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig10.45.1 ID=mRNA_L-elsbetiae_contig10.45.1|Name=mRNA_L-elsbetiae_contig10.45.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=975bp|location=Sequence derived from alignment at L-elsbetiae_contig10:85959..86933- (Laminarionema elsbetiae ELsaHSoW15)
ATGTCAATTATAAGTGAGAATATAAACTTAATTAATAATAGCGTATTCGT ATCCTGTTTTCTTTGTACCTGCGCCTATTGGAGTATTTTATCAATGAGAG ATACAAAAATTTTGCGAACTCTTGCAAAAATTACTTCACGTTTTGCAACC GTAAGTATTTTTCTTTTTTTAACAGACCGTTGGGTTGAGTTTGGATACTT CCCTCTAAGTAATTTATACGAATCATTACTTTTTCTATCTTGCTTACTCC TATTCGTCTATCAAATTTTAGAATATAAAATACAAAGTCCTATATTTGGC GGGATTATTTTACCAATCGTTTTATTTATTACGGCTTTTGCAGCATTTAA ATTACCTCTTGAAATGCAAAAAGCGAGCGCTTTAGTTCCAGCGTTACAAT CAAATTGGTTAATGATGCATGTTAGTTTAATGATGCTGAGTTATTCTTTA TTGATTGCCGGTTCGTCATTAGCAATTCTTTATTTAGTTGTTTTTTTAGA ATATGAAGAATATGTAAGAACGATGCCAATGCGGAATGCCGCTTATGAAA AATCGATTCGACAAGATTTGGGCTTAAAAAGTAGAGAAGAATATTTGAAT TTAGGATTAGATTTAATTTATAAAGAAGAACAGGATATTGTTTTAAATAT TCGTACAAATTTTTTATACCATATCGATAGTTGGAGCTTCCGATCTATCA GTTTAGGCTTTCCTTTTTTAACCATTGGTATAATCGCTGGAGCTGTTTGG GCAAATGAGGCATGGGGATCTTATTGGAGTTGGGATCCTAAAGAAACCTG GGCCTTAATTACTTGGCTAAATTTTGCTGCATATTTGCATATAAGATTAA TAATTGGTTTGAATGGTAAACTTCCAGCTCTTTTAGCGAGTCTTGGGTTT TTTGTCGTTTGGGTTTGTTATCTTGGGGTTAACTTTTTGGGGCAAGGCTT ACACAGCTATGGCTGGTTTATATAA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig10:85959..86933-

>mRNA_L-elsbetiae_contig10.45.1 ID=mRNA_L-elsbetiae_contig10.45.1|Name=mRNA_L-elsbetiae_contig10.45.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1950bp|location=Sequence derived from alignment at L-elsbetiae_contig10:85959..86933- (Laminarionema elsbetiae ELsaHSoW15)
ATGTCAATTATAAGTGAGAATATAAACTTAATTAATAATAGCGTATTCGT
ATCCTGTTTTCTTTGTACCTGCGCCTATTGGAGTATTTTATCAATGAGAG
ATACAAAAATTTTGCGAACTCTTGCAAAAATTACTTCACGTTTTGCAACC
GTAAGTATTTTTCTTTTTTTAACAGACCGTTGGGTTGAGTTTGGATACTT
CCCTCTAAGTAATTTATACGAATCATTACTTTTTCTATCTTGCTTACTCC
TATTCGTCTATCAAATTTTAGAATATAAAATACAAAGTCCTATATTTGGC
GGGATTATTTTACCAATCGTTTTATTTATTACGGCTTTTGCAGCATTTAA
ATTACCTCTTGAAATGCAAAAAGCGAGCGCTTTAGTTCCAGCGTTACAAT
CAAATTGGTTAATGATGCATGTTAGTTTAATGATGCTGAGTTATTCTTTA
TTGATTGCCGGTTCGTCATTAGCAATTCTTTATTTAGTTGTTTTTTTAGA
ATATGAAGAATATGTAAGAACGATGCCAATGCGGAATGCCGCTTATGAAA
AATCGATTCGACAAGATTTGGGCTTAAAAAGTAGAGAAGAATATTTGAAT
TTAGGATTAGATTTAATTTATAAAGAAGAACAGGATATTGTTTTAAATAT
TCGTACAAATTTTTTATACCATATCGATAGTTGGAGCTTCCGATCTATCA
GTTTAGGCTTTCCTTTTTTAACCATTGGTATAATCGCTGGAGCTGTTTGG
GCAAATGAGGCATGGGGATCTTATTGGAGTTGGGATCCTAAAGAAACCTG
GGCCTTAATTACTTGGCTAAATTTTGCTGCATATTTGCATATAAGATTAA
TAATTGGTTTGAATGGTAAACTTCCAGCTCTTTTAGCGAGTCTTGGGTTT
TTTGTCGTTTGGGTTTGTTATCTTGGGGTTAACTTTTTGGGGCAAGGCTT
ACACAGCTATGGCTGGTTTATATAAATGTCAATTATAAGTGAGAATATAA
ACTTAATTAATAATAGCGTATTCGTATCCTGTTTTCTTTGTACCTGCGCC
TATTGGAGTATTTTATCAATGAGAGATACAAAAATTTTGCGAACTCTTGC
AAAAATTACTTCACGTTTTGCAACCGTAAGTATTTTTCTTTTTTTAACAG
ACCGTTGGGTTGAGTTTGGATACTTCCCTCTAAGTAATTTATACGAATCA
TTACTTTTTCTATCTTGCTTACTCCTATTCGTCTATCAAATTTTAGAATA
TAAAATACAAAGTCCTATATTTGGCGGGATTATTTTACCAATCGTTTTAT
TTATTACGGCTTTTGCAGCATTTAAATTACCTCTTGAAATGCAAAAAGCG
AGCGCTTTAGTTCCAGCGTTACAATCAAATTGGTTAATGATGCATGTTAG
TTTAATGATGCTGAGTTATTCTTTATTGATTGCCGGTTCGTCATTAGCAA
TTCTTTATTTAGTTGTTTTTTTAGAATATGAAGAATATGTAAGAACGATG
CCAATGCGGAATGCCGCTTATGAAAAATCGATTCGACAAGATTTGGGCTT
AAAAAGTAGAGAAGAATATTTGAATTTAGGATTAGATTTAATTTATAAAG
AAGAACAGGATATTGTTTTAAATATTCGTACAAATTTTTTATACCATATC
GATAGTTGGAGCTTCCGATCTATCAGTTTAGGCTTTCCTTTTTTAACCAT
TGGTATAATCGCTGGAGCTGTTTGGGCAAATGAGGCATGGGGATCTTATT
GGAGTTGGGATCCTAAAGAAACCTGGGCCTTAATTACTTGGCTAAATTTT
GCTGCATATTTGCATATAAGATTAATAATTGGTTTGAATGGTAAACTTCC
AGCTCTTTTAGCGAGTCTTGGGTTTTTTGTCGTTTGGGTTTGTTATCTTG
GGGTTAACTTTTTGGGGCAAGGCTTACACAGCTATGGCTGGTTTATATAA
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