mRNA_L-elsbetiae_contig16382.4337.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig16382.4337.1 vs. uniprot
Match: A0A6H5KW24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW24_9PHAE) HSP 1 Score: 108 bits (270), Expect = 4.580e-26 Identity = 55/63 (87.30%), Postives = 59/63 (93.65%), Query Frame = 1 Query: 1 ISEKKKQSVREALSDVLAVAAGFLPPWVDALLSSFPFLLPLDLRLRYFRSLAFGVTRSVAYLQ 189 +++K SVREALSD+LAVAAGFLPPWVDALLS FPFLLPLDLRLRYFRSLAFGVTRSVAYLQ Sbjct: 2897 VNDKLADSVREALSDMLAVAAGFLPPWVDALLSGFPFLLPLDLRLRYFRSLAFGVTRSVAYLQ 2959
BLAST of mRNA_L-elsbetiae_contig16382.4337.1 vs. uniprot
Match: A0A7S2UWC4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWC4_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 2.410e-13 Identity = 32/63 (50.79%), Postives = 45/63 (71.43%), Query Frame = 1 Query: 1 ISEKKKQSVREALSDVLAVAAGFLPPWVDALLSSFPFLLPLDLRLRYFRSLAFGVTRSVAYLQ 189 ++ + +++ LSD AVAAG LPPWVD LL F F++P D+RL+YF AFGV+RS+ +LQ Sbjct: 76 VNVRLSEAILVLLSDTFAVAAGMLPPWVDKLLCRFHFVVPFDIRLQYFNCTAFGVSRSICWLQ 138
BLAST of mRNA_L-elsbetiae_contig16382.4337.1 vs. uniprot
Match: A0A8J5XMZ3_DIALT (HECT domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XMZ3_DIALT) HSP 1 Score: 54.7 bits (130), Expect = 4.240e-7 Identity = 28/51 (54.90%), Postives = 36/51 (70.59%), Query Frame = 1 Query: 37 LSDVLAVAAGFLPPWVDALLSSFPFLLPLDLRLRYFRSLAFGVTRSVAYLQ 189 L D+LAVAAG LPPW AL + PFL RLR+FR+ AFG +R++A+ Q Sbjct: 1614 LDDLLAVAAGALPPWCGALTRAAPFLFAERTRLRHFRATAFGTSRALAWAQ 1664
BLAST of mRNA_L-elsbetiae_contig16382.4337.1 vs. uniprot
Match: A0A813ZU54_9BILA (E3 ubiquitin-protein ligase n=1 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A813ZU54_9BILA) HSP 1 Score: 52.8 bits (125), Expect = 2.030e-6 Identity = 27/63 (42.86%), Postives = 39/63 (61.90%), Query Frame = 1 Query: 1 ISEKKKQSVREALSDVLAVAAGFLPPWVDALLSSFPFLLPLDLRLRYFRSLAFGVTRSVAYLQ 189 ISEK + + L D L +A+ +P W LL+S+ FL P + R YF + AFGV+RS+ +LQ Sbjct: 2082 ISEKINNKLVQQLQDPLVLASRSIPDWCKHLLNSYKFLFPFETRQLYFTTTAFGVSRSIVWLQ 2144
BLAST of mRNA_L-elsbetiae_contig16382.4337.1 vs. uniprot
Match: A0A2H2IIB4_CAEJA (E3 ubiquitin-protein ligase n=1 Tax=Caenorhabditis japonica TaxID=281687 RepID=A0A2H2IIB4_CAEJA) HSP 1 Score: 52.0 bits (123), Expect = 3.670e-6 Identity = 27/63 (42.86%), Postives = 38/63 (60.32%), Query Frame = 1 Query: 1 ISEKKKQSVREALSDVLAVAAGFLPPWVDALLSSFPFLLPLDLRLRYFRSLAFGVTRSVAYLQ 189 IS+K V + LSD L VAA LP W L+ +P L +D R Y ++ AFGV+R++ +LQ Sbjct: 12 ISDKLTMKVTQVLSDALVVAARALPGWCSRLVYKYPCLFTVDTRNMYLQATAFGVSRTIVWLQ 74
BLAST of mRNA_L-elsbetiae_contig16382.4337.1 vs. uniprot
Match: A0A3P7JM46_STRVU (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Strongylus vulgaris TaxID=40348 RepID=A0A3P7JM46_STRVU) HSP 1 Score: 50.1 bits (118), Expect = 1.770e-5 Identity = 24/63 (38.10%), Postives = 40/63 (63.49%), Query Frame = 1 Query: 1 ISEKKKQSVREALSDVLAVAAGFLPPWVDALLSSFPFLLPLDLRLRYFRSLAFGVTRSVAYLQ 189 IS+K Q + + LSD L VAA +P W + L+ ++P L + + Y ++ AFGV+R++ +LQ Sbjct: 103 ISDKLTQKLTQELSDALVVAARAMPDWCERLIYTYPCLFSAETKNMYMQATAFGVSRTIVWLQ 165
BLAST of mRNA_L-elsbetiae_contig16382.4337.1 vs. uniprot
Match: A0A016S4T3_9BILA (E3 ubiquitin-protein ligase n=5 Tax=Strongylida TaxID=6308 RepID=A0A016S4T3_9BILA) HSP 1 Score: 50.1 bits (118), Expect = 1.800e-5 Identity = 24/63 (38.10%), Postives = 40/63 (63.49%), Query Frame = 1 Query: 1 ISEKKKQSVREALSDVLAVAAGFLPPWVDALLSSFPFLLPLDLRLRYFRSLAFGVTRSVAYLQ 189 IS+K Q + + LSD L VAA +P W + L+ ++P L + + Y ++ AFGV+R++ +LQ Sbjct: 252 ISDKLTQKLTQELSDALVVAARAMPDWCERLIYTYPCLFSAETKNMYMQATAFGVSRTIVWLQ 314
BLAST of mRNA_L-elsbetiae_contig16382.4337.1 vs. uniprot
Match: G0P4C2_CAEBE (E3 ubiquitin-protein ligase n=1 Tax=Caenorhabditis brenneri TaxID=135651 RepID=G0P4C2_CAEBE) HSP 1 Score: 50.1 bits (118), Expect = 1.810e-5 Identity = 25/63 (39.68%), Postives = 38/63 (60.32%), Query Frame = 1 Query: 1 ISEKKKQSVREALSDVLAVAAGFLPPWVDALLSSFPFLLPLDLRLRYFRSLAFGVTRSVAYLQ 189 IS+K + + LSD L VAA LP W L+ +P L ++ R Y ++ AFGV+R++ +LQ Sbjct: 555 ISDKLTLKITQVLSDALVVAARALPEWCSRLIYKYPCLFSVETRNMYMQATAFGVSRTIVWLQ 617
BLAST of mRNA_L-elsbetiae_contig16382.4337.1 vs. uniprot
Match: A0A3M7PJ09_BRAPC (E3 ubiquitin-protein ligase n=1 Tax=Brachionus plicatilis TaxID=10195 RepID=A0A3M7PJ09_BRAPC) HSP 1 Score: 50.1 bits (118), Expect = 1.820e-5 Identity = 25/63 (39.68%), Postives = 38/63 (60.32%), Query Frame = 1 Query: 1 ISEKKKQSVREALSDVLAVAAGFLPPWVDALLSSFPFLLPLDLRLRYFRSLAFGVTRSVAYLQ 189 IS+K + + L D L +A+ +P W L+S+ FL P + R YF + AFGV+RS+ +LQ Sbjct: 1230 ISQKLNNKLVQQLQDPLVLASRSIPDWCKFTLNSYKFLFPFETRQLYFTTTAFGVSRSIVWLQ 1292
BLAST of mRNA_L-elsbetiae_contig16382.4337.1 vs. uniprot
Match: F2UMM9_SALR5 (HECT-type E3 ubiquitin transferase n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UMM9_SALR5) HSP 1 Score: 50.1 bits (118), Expect = 1.820e-5 Identity = 22/63 (34.92%), Postives = 39/63 (61.90%), Query Frame = 1 Query: 1 ISEKKKQSVREALSDVLAVAAGFLPPWVDALLSSFPFLLPLDLRLRYFRSLAFGVTRSVAYLQ 189 +S K ++ ++D LA+ +G LP W + L S P L P + R ++F + AFG++RS+ ++Q Sbjct: 1549 VSRKLTSKLQRQMADPLALVSGALPSWCETLARSCPVLFPFEARKQFFSARAFGISRSIVWVQ 1611 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16382.4337.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig16382.4337.1 >prot_L-elsbetiae_contig16382.4337.1 ID=prot_L-elsbetiae_contig16382.4337.1|Name=mRNA_L-elsbetiae_contig16382.4337.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=63bp ISEKKKQSVREALSDVLAVAAGFLPPWVDALLSSFPFLLPLDLRLRYFRSback to top mRNA from alignment at L-elsbetiae_contig16382:147..335+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig16382.4337.1 ID=mRNA_L-elsbetiae_contig16382.4337.1|Name=mRNA_L-elsbetiae_contig16382.4337.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=189bp|location=Sequence derived from alignment at L-elsbetiae_contig16382:147..335+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig16382:147..335+ >mRNA_L-elsbetiae_contig16382.4337.1 ID=mRNA_L-elsbetiae_contig16382.4337.1|Name=mRNA_L-elsbetiae_contig16382.4337.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=378bp|location=Sequence derived from alignment at L-elsbetiae_contig16382:147..335+ (Laminarionema elsbetiae ELsaHSoW15)back to top |