prot_L-elsbetiae_contig1610.4194.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig1610.4194.1
Unique Name	prot_L-elsbetiae_contig1610.4194.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	181

Homology

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BLAST of mRNA_L-elsbetiae_contig1610.4194.1 vs. uniprot
Match: A0A6H5JLT2_9PHAE (GPS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLT2_9PHAE)

HSP 1 Score: 201 bits (511), Expect = 7.620e-57
Identity = 107/180 (59.44%), Postives = 127/180 (70.56%), Query Frame = 0

Query:    2 SHKSELMPCMDAVNHSYMATVHMVKHYGTPAK-PNDHNHVSIVAEINISALRESAAVKIQAVVRMHQAYSRTMRRQEVKVWHGPIVLDMRKRLTFRAYASLAIYTLVIAWINLCYVASYDTAAIRGWVASTAVTVLADILLRKPLSVLAIATFYTIRHYVRVPETVYVGKGRSQRPIGQL 180
            SHK+ELMPCMDAVN  YM+ + M K Y  P K  + H HVS    I++  LR +AAVKIQ +VRM+QA  R +RRQEV  W  P V  MRKRLTFRAY  L ++T  +AWINLCYVA YD  AIR W+A+T + VL DI+LRKPLSVL +AT  TIR   RVP TVY+GKG  QRPIG+ 
Sbjct:  725 SHKNELMPCMDAVNQRYMSQISMAKMYRPPPKVDHSHQHVSSWT-IDLCILRNTAAVKIQTLVRMYQARQRAVRRQEVVAWQSPHVRSMRKRLTFRAYTCLIVFTASVAWINLCYVALYDGPAIRNWIAATGIAVLVDIVLRKPLSVLVVATVNTIRDSARVPGTVYIGKGPFQRPIGKF 903

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BLAST of mRNA_L-elsbetiae_contig1610.4194.1 vs. uniprot
Match: D7FLP9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLP9_ECTSI)

HSP 1 Score: 138 bits (347), Expect = 6.010e-37
Identity = 73/125 (58.40%), Postives = 89/125 (71.20%), Query Frame = 0

Query:    2 SHKSELMPCMDAVNHSYMATVHMVKHYGTPAK-PNDHNHVSIVAEINISALRESAAVKIQAVVRMHQAYSRTMRRQEVKVWHGPIVLDMRKRLTFRAYASLAIYTLVIAWINLCYVASYDTAAIR 125
            SHK+ELMPCMDAVN  YM+ + M K Y  P K  + H HVS  + I++  LR +AAVKIQ +VRM+QA+ R +RRQEV VW  P V  MR+RLTFRAYA L ++T  +AWINLCYV  YD  AIR
Sbjct:  151 SHKNELMPCMDAVNQRYMSQISMAKMYRPPPKVDHSHQHVSS-STIDLCILRNTAAVKIQTLVRMYQAHQRAVRRQEVVVWQCPRVKSMRRRLTFRAYACLIVFTASVAWINLCYVVMYDGPAIR 274

[Close]

BLAST of mRNA_L-elsbetiae_contig1610.4194.1 vs. uniprot
Match: D7G4X3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4X3_ECTSI)

HSP 1 Score: 136 bits (343), Expect = 6.810e-34
Identity = 72/125 (57.60%), Postives = 88/125 (70.40%), Query Frame = 0

Query:    2 SHKSELMPCMDAVNHSYMATVHMVKHYGTPAK-PNDHNHVSIVAEINISALRESAAVKIQAVVRMHQAYSRTMRRQEVKVWHGPIVLDMRKRLTFRAYASLAIYTLVIAWINLCYVASYDTAAIR 125
            SHK+ELMPCMDAVN  YM+ + M K Y  P K  + H HVS  + I++  LR +AAVKIQ +VRM+QA+ R +RRQEV VW  P V  MR+RLTFRAY  L ++T  +AWINLCYV  YD  AIR
Sbjct: 1659 SHKNELMPCMDAVNQRYMSQISMAKMYRPPPKVDHSHQHVSS-STIDLCILRNTAAVKIQTLVRMYQAHQRAVRRQEVVVWQCPRVKSMRRRLTFRAYTCLIVFTASVAWINLCYVVMYDGPAIR 1782

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig1610.4194.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig1610.4194.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A6H5JLT2_9PHAE	7.620e-57	59.44	GPS domain-containing protein n=1 Tax=Ectocarpus s...	[more]
D7FLP9_ECTSI	6.010e-37	58.40	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7G4X3_ECTSI	6.810e-34	57.60	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000048	IQ motif, EF-hand binding site	PFAM	PF00612	IQ	coord: 54..68 e-value: 0.0022 score: 17.6
IPR000048	IQ motif, EF-hand binding site	PROSITE	PS50096	IQ	coord: 52..79 score: 7.291
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 119..123
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 142..180
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 124..141
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 97..118
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..96
None	No IPR available	TMHMM	TMhelix		coord: 97..119
None	No IPR available	TMHMM	TMhelix		coord: 134..156

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig1610	contig	L-elsbetiae_contig1610:19955..21487 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig1610.4194.1	mRNA_L-elsbetiae_contig1610.4194.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig1610 18223..22780 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig1610.4194.1 ID=prot_L-elsbetiae_contig1610.4194.1|Name=mRNA_L-elsbetiae_contig1610.4194.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=181bp
MSHKSELMPCMDAVNHSYMATVHMVKHYGTPAKPNDHNHVSIVAEINISA
LRESAAVKIQAVVRMHQAYSRTMRRQEVKVWHGPIVLDMRKRLTFRAYAS
LAIYTLVIAWINLCYVASYDTAAIRGWVASTAVTVLADILLRKPLSVLAI
ATFYTIRHYVRVPETVYVGKGRSQRPIGQL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000048	IQ_motif_EF-hand-BS