mRNA_L-elsbetiae_contig1598.4121.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1598.4121.1 vs. uniprot
Match: D7FRN6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRN6_ECTSI) HSP 1 Score: 80.1 bits (196), Expect = 2.790e-13 Identity = 66/157 (42.04%), Postives = 82/157 (52.23%), Query Frame = 2 Query: 2024 LGKSSREETFDVATARNGFSGIQPCDVGGAT--KVCRTPKPRGRWRRTSVSNGHWRRATDVKRGLAGPGLRGTGAA-ATTSNASFPRPAA-QGVHPFL--ASAGVRRGHGIVTGGVNEEEGARRDGMDHTPERRPIRPKAIKSPMYARRGRSEERNV 2476 +GK+ E+TFDVATARNGFSGI+ G + K C TP PRGR R G+ R D + + AA AT N S P +GVH FL A RR G + EE+ RD D TPERRP RP AIKSP+ +R ++R + Sbjct: 1 MGKACTEDTFDVATARNGFSGIRSLQALGLSEEKGCSTPTPRGR--RCDAWAGN--RGGDRGQASHRAAMHVVSAAVATAENGSSSEPRCMRGVHAFLNPGEAATRRAAGSKF--LPEEDEKTRDWRDRTPERRPARPPAIKSPIGEKRVGQKDRTM 151 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1598.4121.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1598.4121.1 >prot_L-elsbetiae_contig1598.4121.1 ID=prot_L-elsbetiae_contig1598.4121.1|Name=mRNA_L-elsbetiae_contig1598.4121.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=806bp MAWQPRWQGSFGELCRDVNGTDRQVDGRVLHACEALGLCQGRFVPTILLAback to top mRNA from alignment at L-elsbetiae_contig1598:12381..18955- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1598.4121.1 ID=mRNA_L-elsbetiae_contig1598.4121.1|Name=mRNA_L-elsbetiae_contig1598.4121.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6575bp|location=Sequence derived from alignment at L-elsbetiae_contig1598:12381..18955- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1598:12381..18955- >mRNA_L-elsbetiae_contig1598.4121.1 ID=mRNA_L-elsbetiae_contig1598.4121.1|Name=mRNA_L-elsbetiae_contig1598.4121.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4836bp|location=Sequence derived from alignment at L-elsbetiae_contig1598:12381..18955- (Laminarionema elsbetiae ELsaHSoW15)back to top |