mRNA_L-elsbetiae_contig159.4079.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig159.4079.1 vs. uniprot
Match: D8LF26_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF26_ECTSI) HSP 1 Score: 200 bits (509), Expect = 1.670e-58 Identity = 112/186 (60.22%), Postives = 125/186 (67.20%), Query Frame = 3 Query: 42 MVPHTGQRSVGKD-STAPAAGPKRKAP-TAKGKGVASADPGRLQAKQGKAPRTGKAKPARQGGVAAGVKGSAAEEDGXXXXXXXXXXXXXSDIDDIFAGVKRLKAEKAEEEVERAAKXXXMKEEHKRREANPFTGEGGPERRWGWADEVKPVRFDDEGLPIYTWDSLRIGQGGGTALCPFDCDCCF 593 M PH+ QR G+ ++ G KRKAP T GK VASADP RLQ K + + P G G KG ++ SDIDDIFAGVKRLK EKAEEE R AK +KEEHKRR+ANPFTGEGGP++RW WADEVKPVRFDDEGLPIYTW+SLRIGQGGGTA CPFDCDCCF Sbjct: 1 MAPHSEQRPTGQTLASTGGRGLKRKAPNTPAGKAVASADPARLQGKT----TSSRKPPPTSTGAKGGDKGKGSKPIEEGTGKGKAKGKVKSDIDDIFAGVKRLKEEKAEEEAARVAKKKKIKEEHKRRQANPFTGEGGPDKRWAWADEVKPVRFDDEGLPIYTWESLRIGQGGGTAACPFDCDCCF 182
BLAST of mRNA_L-elsbetiae_contig159.4079.1 vs. uniprot
Match: A0A5D6Y0I8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0I8_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 6.150e-11 Identity = 44/107 (41.12%), Postives = 60/107 (56.07%), Query Frame = 3 Query: 306 SDIDDIFAGVKRLKAEK--AEEEVERAAKXXXMKEEH---------KRREANPFTGEGGPERRWGWADEVKPVRFDDEGLPIYTWDSLRIGQGGGTALCPFDCDCCF 593 S+IDD+F +K K E+ AEE+ +R A K++ K+ EA G E +PVR+D++G+PIYT ++LRI QGG TA CPFDC CCF Sbjct: 107 SEIDDLFQSLKAQKKEQVAAEEKEQRDANKALAKQQQEKLRLEEQIKKLEAQNTNSTA----MTGKNPEARPVRYDEDGMPIYTEEALRINQGGDTADCPFDCWCCF 209
BLAST of mRNA_L-elsbetiae_contig159.4079.1 vs. uniprot
Match: A0A0G4F5Z7_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F5Z7_VITBC) HSP 1 Score: 70.1 bits (170), Expect = 1.730e-10 Identity = 27/37 (72.97%), Postives = 31/37 (83.78%), Query Frame = 3 Query: 483 KPVRFDDEGLPIYTWDSLRIGQGGGTALCPFDCDCCF 593 +P R+ +EG PIYT + LRIGQGGGT LCPFDCDCCF Sbjct: 133 RPRRYTEEGWPIYTEEELRIGQGGGTPLCPFDCDCCF 169
BLAST of mRNA_L-elsbetiae_contig159.4079.1 vs. uniprot
Match: A0A2D4C8L2_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C8L2_PYTIN) HSP 1 Score: 70.1 bits (170), Expect = 3.750e-10 Identity = 43/107 (40.19%), Postives = 60/107 (56.07%), Query Frame = 3 Query: 309 DIDDIFAGVKRLKAEKAEEEVERAAKXXXMKEEHKRREANPFTGEGGPERR------------WGWADEVKPVRFDDEGLPIYTWDSLRIGQGGGTALCPFDCDCCF 593 DIDD+F +K K +E E+AA+ EE ++R+A + E + G + +PVR+D++GLPIYT SL+IG+GG TA CPFDC CCF Sbjct: 107 DIDDLFQSLKTKK-----QESEKAAELKKRDEELQKRKARKEREQLDDEIKRLEAQNTNVTAMQGQNPDPRPVRYDEDGLPIYTEASLQIGKGGDTADCPFDCWCCF 208
BLAST of mRNA_L-elsbetiae_contig159.4079.1 vs. uniprot
Match: A0A0P1B5W0_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B5W0_PLAHL) HSP 1 Score: 68.9 bits (167), Expect = 7.930e-10 Identity = 41/102 (40.20%), Postives = 58/102 (56.86%), Query Frame = 3 Query: 306 SDIDDIFAGVKRLKAEK-AEEEVERAAKXXXMKEEHKRREA-----NPFTGEGGPERRWGWADEVKPVRFDDEGLPIYTWDSLRIGQGGGTALCPFDCDCCF 593 ++IDD+FA +K K +K EE ++ AK + E K RE + G + +PVR+D++GLPIYT +L+IG+GG T CPFDC CCF Sbjct: 98 AEIDDLFAILKTKKRKKNIAEENQKLAKEVKERCEKKERERLQQQIKKLEAQNTNSTACGLNPDPRPVRYDEDGLPIYTEAALQIGKGGNTQDCPFDCWCCF 199
BLAST of mRNA_L-elsbetiae_contig159.4079.1 vs. uniprot
Match: A0A024TNS1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TNS1_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 2.320e-9 Identity = 39/93 (41.94%), Postives = 51/93 (54.84%), Query Frame = 3 Query: 333 VKRLKAEKAEEEVERAAKXXXMKE------EHKRREANPFTGEGGPERRWGWADEVKPVRFDDEGLPIYTWDSLRIGQGGGTALCPFDCDCCF 593 V + KA + +E ERA K K EHK++ + F + +PVR+D +GLPIYT +SLR+ QGG TA CPFDC CCF Sbjct: 83 VDKDKAVQRQEAKERAEKLAYRKHLEALEAEHKQKNNDTF--------------DPRPVRYDADGLPIYTEESLRLNQGGDTADCPFDCWCCF 161
BLAST of mRNA_L-elsbetiae_contig159.4079.1 vs. uniprot
Match: W4GJQ6_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GJQ6_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 2.580e-9 Identity = 36/96 (37.50%), Postives = 57/96 (59.38%), Query Frame = 3 Query: 312 IDDIFAGVKRLKAEKAEEE--VERAAKXXXMKEEHKRREANPFTGEGGPERRWGWADEVKPVRFDDEGLPIYTWDSLRIGQGGGTALCPFDCDCCF 593 +D +F+G+K K +K +E+ V R ++ R+ E +++ + + +PVR+D +GLPIY+ +SLR+ QGG TA CPFDC CCF Sbjct: 73 LDALFSGIKAKKQQKIDEDNAVRRQEDKELAEKRAYRKHLEALEAEH--KQKNNDSSDPRPVRYDADGLPIYSEESLRLNQGGETADCPFDCWCCF 166
BLAST of mRNA_L-elsbetiae_contig159.4079.1 vs. uniprot
Match: A0A8K1CU05_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CU05_PYTOL) HSP 1 Score: 67.8 bits (164), Expect = 2.620e-9 Identity = 26/39 (66.67%), Postives = 33/39 (84.62%), Query Frame = 3 Query: 477 EVKPVRFDDEGLPIYTWDSLRIGQGGGTALCPFDCDCCF 593 E +PVR+D++GLPIYT +SL+I +GG TA CPFDC CCF Sbjct: 177 EARPVRYDEDGLPIYTEESLQINKGGDTAECPFDCWCCF 215
BLAST of mRNA_L-elsbetiae_contig159.4079.1 vs. uniprot
Match: A0A1J4MQA7_9CRYT (Uncharacterized protein n=2 Tax=Cryptosporidium TaxID=5806 RepID=A0A1J4MQA7_9CRYT) HSP 1 Score: 65.1 bits (157), Expect = 2.780e-9 Identity = 32/98 (32.65%), Postives = 56/98 (57.14%), Query Frame = 3 Query: 306 SDIDDIFAGV--KRLKAEKAEEEVERAAKXXXMKEEHKRREANPFTGEGGPERRWGWADEVKPVRFDDEGLPIYTWDSLRIGQGGGTALCPFDCDCCF 593 S+I++IF + K+L+ ++ E ++++A K K H + + ++KP+R+ ++GLP+Y + L+IGQGG T CPFDC CC+ Sbjct: 32 SEINEIFQVISEKKLERQRLESQLKKATKFKTSKAIHNKEIRQV-------------SSKIKPIRYTEDGLPVYKLEDLKIGQGGDTPDCPFDCKCCY 116
BLAST of mRNA_L-elsbetiae_contig159.4079.1 vs. uniprot
Match: A0A3F2RN39_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RN39_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 2.940e-9 Identity = 26/39 (66.67%), Postives = 32/39 (82.05%), Query Frame = 3 Query: 477 EVKPVRFDDEGLPIYTWDSLRIGQGGGTALCPFDCDCCF 593 + +PVR+D++GLPIYT SL IG+GGGT CPFDC CCF Sbjct: 166 DARPVRYDEDGLPIYTEASLHIGKGGGTKDCPFDCWCCF 204 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig159.4079.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig159.4079.1 >prot_L-elsbetiae_contig159.4079.1 ID=prot_L-elsbetiae_contig159.4079.1|Name=mRNA_L-elsbetiae_contig159.4079.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=185bp MVPHTGQRSVGKDSTAPAAGPKRKAPTAKGKGVASADPGRLQAKQGKAPRback to top mRNA from alignment at L-elsbetiae_contig159:35091..38803- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig159.4079.1 ID=mRNA_L-elsbetiae_contig159.4079.1|Name=mRNA_L-elsbetiae_contig159.4079.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3713bp|location=Sequence derived from alignment at L-elsbetiae_contig159:35091..38803- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig159:35091..38803- >mRNA_L-elsbetiae_contig159.4079.1 ID=mRNA_L-elsbetiae_contig159.4079.1|Name=mRNA_L-elsbetiae_contig159.4079.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1110bp|location=Sequence derived from alignment at L-elsbetiae_contig159:35091..38803- (Laminarionema elsbetiae ELsaHSoW15)back to top |