prot_L-elsbetiae_contig15897.4073.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig15897.4073.1
Unique Nameprot_L-elsbetiae_contig15897.4073.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length360
Homology
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BLAST of mRNA_L-elsbetiae_contig15897.4073.1 vs. uniprot
Match: D8LSN9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSN9_ECTSI)

HSP 1 Score: 142 bits (357), Expect = 8.090e-36
Identity = 75/106 (70.75%), Postives = 84/106 (79.25%), Query Frame = 0 
Query:  226 IALWLDMRTAVLPAAQTLKGLYDDLRRREEALGRGPGDPDWALGRVPDPVGALLYAAQPAERAAEEMAALGG-GGALPCFRLSGAD-EGKILDVSSGDVAGIGLDP 329
            +ALWLDMRTAVLPAAQTLK LY +LR+REEALGR P D DW L RVP+PVGALLYAA+P ERAAEEM ALG    ALPCFRL G D    ++DVSSG V G+ +DP
Sbjct:  105 VALWLDMRTAVLPAAQTLKTLYGELRQREEALGRSPEDTDWTLSRVPNPVGALLYAAEPEERAAEEMVALGETAAALPCFRLGGTDGTAVVVDVSSGHVVGVRVDP 210
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15897.4073.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LSN9_ECTSI8.090e-3670.75Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig15897contigL-elsbetiae_contig15897:2365..3984 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig15897.4073.1mRNA_L-elsbetiae_contig15897.4073.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig15897 2365..3984 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig15897.4073.1 ID=prot_L-elsbetiae_contig15897.4073.1|Name=mRNA_L-elsbetiae_contig15897.4073.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=360bp
SRSRCSSFVALNLVVCVQQSVFDNQKPENPFRLPGREAGGVPPQTHASMI
VSKAWWIAVAALVVSEARASSPGRRPPANLRRAHCSAPLPPSSSASSSPP
AGPSRKATAPAFLPPLGPLSLFSPPAPTTRLPGSSSSSSSSSSLATRAPS
CCRHRRLRRAKTRPPPPSPPPSRAGARQDRRSSALFMTAGGTTLPSDDAG
NDSDSLPPGQAEATGGGSGGGGGGGIALWLDMRTAVLPAAQTLKGLYDDL
RRREEALGRGPGDPDWALGRVPDPVGALLYAAQPAERAAEEMAALGGGGA
LPCFRLSGADEGKILDVSSGDVAGIGLDPASAGGGGIGGSPAVEIVAAAQ
RTGGSGSGSG
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