mRNA_L-elsbetiae_contig15745.4012.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig15745.4012.1
Unique NamemRNA_L-elsbetiae_contig15745.4012.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig15745.4012.1 vs. uniprot
Match: D7FXD6_ECTSI (Serine/threonine-protein phosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXD6_ECTSI)

HSP 1 Score: 300 bits (767), Expect = 1.070e-100
Identity = 140/147 (95.24%), Postives = 146/147 (99.32%), Query Frame = 1 
Query:    4 VKDILIEENNVQMVRSPVTICGDIHGQFYDLLQLLAMGGNVPDTSYIFMGDFVDRGHNSVETFQLLMALKARYPDCMTLLRGNHESRQITQVYGFYEECMRKYGNANPWKYCVDVFDHLNLAALVDNEVLCVHGGLSPEIRTLDQVR 444
            VK+ILIEENNVQ+VRSPVTICGDIHGQFYDLL+LLAMGG VPDTSYIFMGDFVDRGHNSVETFQLLMALKARYPDCMTLLRGNHESRQITQVYGFYEECMRKYGNANPWKYCV+VFDHLNLAALVDNEVLCVHGGLSPEIRT+DQ+R
Sbjct:   27 VKEILIEENNVQLVRSPVTICGDIHGQFYDLLELLAMGGKVPDTSYIFMGDFVDRGHNSVETFQLLMALKARYPDCMTLLRGNHESRQITQVYGFYEECMRKYGNANPWKYCVEVFDHLNLAALVDNEVLCVHGGLSPEIRTIDQIR 173
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BLAST of mRNA_L-elsbetiae_contig15745.4012.1 vs. uniprot
Match: W4H4C7_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H4C7_9STRA)

HSP 1 Score: 265 bits (677), Expect = 6.410e-88
Identity = 118/147 (80.27%), Postives = 138/147 (93.88%), Query Frame = 1 
Query:    4 VKDILIEENNVQMVRSPVTICGDIHGQFYDLLQLLAMGGNVPDTSYIFMGDFVDRGHNSVETFQLLMALKARYPDCMTLLRGNHESRQITQVYGFYEECMRKYGNANPWKYCVDVFDHLNLAALVDNEVLCVHGGLSPEIRTLDQVR 444
            VK+IL+EE+NVQ+V SPVT+CGDIHGQFYDLL+L  +GG +P T+Y+FMGDFVDRGHNSVETF++L+ LKARYPD +TLLRGNHESRQ+TQVYGFYEEC+RKYGNANPWKYC DVFD+LNLAA++D +VLCVHGGLSPEIRTLDQVR
Sbjct:   29 VKEILVEESNVQLVSSPVTVCGDIHGQFYDLLELFRVGGELPTTNYVFMGDFVDRGHNSVETFEMLLCLKARYPDRITLLRGNHESRQVTQVYGFYEECVRKYGNANPWKYCTDVFDYLNLAAVIDGKVLCVHGGLSPEIRTLDQVR 175
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BLAST of mRNA_L-elsbetiae_contig15745.4012.1 vs. uniprot
Match: A0A024UH92_9STRA (Serine/threonine-protein phosphatase n=6 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024UH92_9STRA)

HSP 1 Score: 265 bits (677), Expect = 5.010e-87
Identity = 118/147 (80.27%), Postives = 138/147 (93.88%), Query Frame = 1 
Query:    4 VKDILIEENNVQMVRSPVTICGDIHGQFYDLLQLLAMGGNVPDTSYIFMGDFVDRGHNSVETFQLLMALKARYPDCMTLLRGNHESRQITQVYGFYEECMRKYGNANPWKYCVDVFDHLNLAALVDNEVLCVHGGLSPEIRTLDQVR 444
            VK+IL+EE+NVQ+V SPVT+CGDIHGQFYDLL+L  +GG +P T+Y+FMGDFVDRGHNSVETF++L+ LKARYPD +TLLRGNHESRQ+TQVYGFYEEC+RKYGNANPWKYC DVFD+LNLAA++D +VLCVHGGLSPEIRTLDQVR
Sbjct:   29 VKEILVEESNVQLVSSPVTVCGDIHGQFYDLLELFRVGGELPTTNYVFMGDFVDRGHNSVETFEMLLCLKARYPDRITLLRGNHESRQVTQVYGFYEECVRKYGNANPWKYCTDVFDYLNLAAVIDGKVLCVHGGLSPEIRTLDQVR 175
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BLAST of mRNA_L-elsbetiae_contig15745.4012.1 vs. uniprot
Match: W7TS65_9STRA (Serine/threonine-protein phosphatase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TS65_9STRA)

HSP 1 Score: 264 bits (674), Expect = 1.380e-86
Identity = 124/147 (84.35%), Postives = 134/147 (91.16%), Query Frame = 1 
Query:    4 VKDILIEENNVQMVRSPVTICGDIHGQFYDLLQLLAMGGNVPDTSYIFMGDFVDRGHNSVETFQLLMALKARYPDCMTLLRGNHESRQITQVYGFYEECMRKYGNANPWKYCVDVFDHLNLAALVDNEVLCVHGGLSPEIRTLDQVR 444
            VK+ILIEE NVQ VRSPVT+CGDIHGQF+DLL+L A GG VP TSYIFMGDFVDRGHNSVET  LL+ LKARYP  MTLLRGNHESRQITQVYGFYEECMRKYGNAN WKYCVDVFD+LNLAAL+D +VLCVHGGLSPEIRT+DQ+R
Sbjct:   27 VKEILIEECNVQPVRSPVTVCGDIHGQFFDLLKLFACGGEVPQTSYIFMGDFVDRGHNSVETLTLLLCLKARYPQNMTLLRGNHESRQITQVYGFYEECMRKYGNANAWKYCVDVFDYLNLAALIDGQVLCVHGGLSPEIRTVDQIR 173
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BLAST of mRNA_L-elsbetiae_contig15745.4012.1 vs. uniprot
Match: A0A1V9ZA30_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZA30_9STRA)

HSP 1 Score: 259 bits (662), Expect = 9.470e-85
Identity = 116/147 (78.91%), Postives = 135/147 (91.84%), Query Frame = 1 
Query:    4 VKDILIEENNVQMVRSPVTICGDIHGQFYDLLQLLAMGGNVPDTSYIFMGDFVDRGHNSVETFQLLMALKARYPDCMTLLRGNHESRQITQVYGFYEECMRKYGNANPWKYCVDVFDHLNLAALVDNEVLCVHGGLSPEIRTLDQVR 444
            VK+IL+EE+NVQ V SPVT+CGDIHGQFYDLL+L  +GG +P T+Y+FMGDFVDRG+NSVETF+LL+ LKARYPD +TLLRGNHESRQ+TQVYGFYEEC+RKYGNANPWKYC DVFD+LNLAA++D  +LCVHGGLSPEI TLDQVR
Sbjct:   29 VKEILVEESNVQAVSSPVTVCGDIHGQFYDLLELFRVGGELPTTNYVFMGDFVDRGNNSVETFELLLCLKARYPDRITLLRGNHESRQVTQVYGFYEECVRKYGNANPWKYCTDVFDYLNLAAVIDGRILCVHGGLSPEIHTLDQVR 175
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BLAST of mRNA_L-elsbetiae_contig15745.4012.1 vs. uniprot
Match: K3X097_GLOUD (Serine/threonine-protein phosphatase n=4 Tax=Pythiaceae TaxID=4782 RepID=K3X097_GLOUD)

HSP 1 Score: 257 bits (656), Expect = 1.310e-83
Identity = 117/147 (79.59%), Postives = 133/147 (90.48%), Query Frame = 1 
Query:    4 VKDILIEENNVQMVRSPVTICGDIHGQFYDLLQLLAMGGNVPDTSYIFMGDFVDRGHNSVETFQLLMALKARYPDCMTLLRGNHESRQITQVYGFYEECMRKYGNANPWKYCVDVFDHLNLAALVDNEVLCVHGGLSPEIRTLDQVR 444
            VK +LIEE+NV  V SPVT+CGDIHGQF+DLL+L   GG VP+T+YIFMGDFVDRGHNSVETF+LL+ LKA+YPD +TLLRGNHE RQITQVYGFYEEC+RKYGNANPWKYC DVFD+LNLAA++D  VLCVHGGLSPEIRTLDQ+R
Sbjct:   46 VKQLLIEESNVVAVSSPVTVCGDIHGQFFDLLELFRCGGEVPNTNYIFMGDFVDRGHNSVETFELLLCLKAQYPDRITLLRGNHECRQITQVYGFYEECVRKYGNANPWKYCTDVFDYLNLAAVIDGRVLCVHGGLSPEIRTLDQIR 192
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BLAST of mRNA_L-elsbetiae_contig15745.4012.1 vs. uniprot
Match: F0WDQ3_9STRA (Serine/threonine-protein phosphatase n=2 Tax=Albugo TaxID=65356 RepID=F0WDQ3_9STRA)

HSP 1 Score: 259 bits (661), Expect = 1.700e-83
Identity = 118/147 (80.27%), Postives = 133/147 (90.48%), Query Frame = 1 
Query:    4 VKDILIEENNVQMVRSPVTICGDIHGQFYDLLQLLAMGGNVPDTSYIFMGDFVDRGHNSVETFQLLMALKARYPDCMTLLRGNHESRQITQVYGFYEECMRKYGNANPWKYCVDVFDHLNLAALVDNEVLCVHGGLSPEIRTLDQVR 444
            VKD LIEE+NVQ V SPVT+CGDIHGQF+DLL+L   GGN+  T+YIFMGDFVDRGHNSVETF+LL+ LKARYPD +TLLRGNHE RQITQVYGFYEEC+RKYGNANPWKYC DVFD+LNLAA++D  +LCVHGGLSPEIRTLDQ+R
Sbjct:  112 VKDQLIEESNVQPVTSPVTVCGDIHGQFFDLLELFRSGGNITHTNYIFMGDFVDRGHNSVETFELLLCLKARYPDRITLLRGNHECRQITQVYGFYEECVRKYGNANPWKYCTDVFDYLNLAAVIDGRILCVHGGLSPEIRTLDQIR 258
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BLAST of mRNA_L-elsbetiae_contig15745.4012.1 vs. uniprot
Match: A0A835ZDV3_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDV3_9STRA)

HSP 1 Score: 255 bits (652), Expect = 3.430e-83
Identity = 118/147 (80.27%), Postives = 130/147 (88.44%), Query Frame = 1 
Query:    4 VKDILIEENNVQMVRSPVTICGDIHGQFYDLLQLLAMGGNVPDTSYIFMGDFVDRGHNSVETFQLLMALKARYPDCMTLLRGNHESRQITQVYGFYEECMRKYGNANPWKYCVDVFDHLNLAALVDNEVLCVHGGLSPEIRTLDQVR 444
            V  +LIEEN V  V SPVT+CGDIHGQFYDLL+LL  GG +P TSYIFMGDFVDRGHNSVETF+LLM LKAR+PD +TLLRGNHESRQITQVYGFYEECMRKYGNANPW+YC +VFDHL+LAAL+D   LCVHGGLSPEIR LDQ+R
Sbjct:   30 VVSLLIEENTVHPVASPVTVCGDIHGQFYDLLELLRTGGELPGTSYIFMGDFVDRGHNSVETFELLMCLKARWPDRVTLLRGNHESRQITQVYGFYEECMRKYGNANPWRYCTNVFDHLSLAALIDGRALCVHGGLSPEIRCLDQIR 176
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BLAST of mRNA_L-elsbetiae_contig15745.4012.1 vs. uniprot
Match: M4BZB8_HYAAE (Serine/threonine-protein phosphatase n=24 Tax=Peronosporaceae TaxID=4777 RepID=M4BZB8_HYAAE)

HSP 1 Score: 256 bits (653), Expect = 3.630e-83
Identity = 116/147 (78.91%), Postives = 133/147 (90.48%), Query Frame = 1 
Query:    4 VKDILIEENNVQMVRSPVTICGDIHGQFYDLLQLLAMGGNVPDTSYIFMGDFVDRGHNSVETFQLLMALKARYPDCMTLLRGNHESRQITQVYGFYEECMRKYGNANPWKYCVDVFDHLNLAALVDNEVLCVHGGLSPEIRTLDQVR 444
            VK +LIEE+NVQ V SPVT+CGDIHGQF+DLL+L   GG++ DT+YIFMGDFVDRGHNSVETF+LL+ LK RYPD +TLLRGNHE RQITQVYGFYEEC+RKYGNANPWKYC DVFD+LNLAA++D  VLCVHGGLSPE+RTLDQ+R
Sbjct:   46 VKLLLIEESNVQPVSSPVTVCGDIHGQFFDLLELFRCGGDIRDTNYIFMGDFVDRGHNSVETFELLLCLKVRYPDRITLLRGNHECRQITQVYGFYEECVRKYGNANPWKYCTDVFDYLNLAAIIDGRVLCVHGGLSPELRTLDQIR 192
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BLAST of mRNA_L-elsbetiae_contig15745.4012.1 vs. uniprot
Match: A0A1R2BSC0_9CILI (Serine/threonine-protein phosphatase n=3 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2BSC0_9CILI)

HSP 1 Score: 252 bits (644), Expect = 4.790e-82
Identity = 110/147 (74.83%), Postives = 136/147 (92.52%), Query Frame = 1 
Query:    4 VKDILIEENNVQMVRSPVTICGDIHGQFYDLLQLLAMGGNVPDTSYIFMGDFVDRGHNSVETFQLLMALKARYPDCMTLLRGNHESRQITQVYGFYEECMRKYGNANPWKYCVDVFDHLNLAALVDNEVLCVHGGLSPEIRTLDQVR 444
            VK +L+EENNVQ V +PV ICGDIHGQFYDL +L  +GG++P+ +YIFMGD+VDRG+NSVETF+LL+ALK +YP C+TLLRGNHESRQITQVYGFY+EC+RKYGN+NPWKYC DVFD+LN+AA+V+N++LCVHGGLSPEI+TLDQ+R
Sbjct:   27 VKALLMEENNVQPVSAPVIICGDIHGQFYDLQELFRIGGSIPEQNYIFMGDYVDRGYNSVETFELLLALKVKYPQCITLLRGNHESRQITQVYGFYDECVRKYGNSNPWKYCTDVFDYLNIAAVVENKILCVHGGLSPEIKTLDQIR 173
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15745.4012.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXD6_ECTSI1.070e-10095.24Serine/threonine-protein phosphatase n=2 Tax=Ectoc... [more]
W4H4C7_9STRA6.410e-8880.27Serine/threonine-protein phosphatase n=1 Tax=Aphan... [more]
A0A024UH92_9STRA5.010e-8780.27Serine/threonine-protein phosphatase n=6 Tax=Sapro... [more]
W7TS65_9STRA1.380e-8684.35Serine/threonine-protein phosphatase n=2 Tax=Monod... [more]
A0A1V9ZA30_9STRA9.470e-8578.91Serine/threonine-protein phosphatase n=1 Tax=Achly... [more]
K3X097_GLOUD1.310e-8379.59Serine/threonine-protein phosphatase n=4 Tax=Pythi... [more]
F0WDQ3_9STRA1.700e-8380.27Serine/threonine-protein phosphatase n=2 Tax=Albug... [more]
A0A835ZDV3_9STRA3.430e-8380.27Serine/threonine-protein phosphatase n=1 Tax=Tribo... [more]
M4BZB8_HYAAE3.630e-8378.91Serine/threonine-protein phosphatase n=24 Tax=Pero... [more]
A0A1R2BSC0_9CILI4.790e-8274.83Serine/threonine-protein phosphatase n=3 Tax=Stent... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig15745contigL-elsbetiae_contig15745:582..3781 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score302.0
Seed ortholog evalue1.5e-79
Seed eggNOG ortholog2880.D7FXD6
Preferred namePPP6C
KEGG koko:K01090,ko:K15423,ko:K15427,ko:K15498
KEGG Pathwayko04922,map04922
Hectar predicted targeting categoryother localisation
GOsGO:0000082,GO:0000159,GO:0000226,GO:0000228,GO:0000235,GO:0000278,GO:0000785,GO:0000790,GO:0001302,GO:0001932,GO:0001933,GO:0002097,GO:0002098,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004721,GO:0004722,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005730,GO:0005737,GO:0005739,GO:0005818,GO:0005819,GO:0005829,GO:0005856,GO:0005874,GO:0005876,GO:0005881,GO:0005938,GO:0006139,GO:0006140,GO:0006259,GO:0006281,GO:0006396,GO:0006399,GO:0006400,GO:0006464,GO:0006468,GO:0006470,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006888,GO:0006900,GO:0006901,GO:0006903,GO:0006950,GO:0006974,GO:0006979,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007088,GO:0007154,GO:0007163,GO:0007165,GO:0007275,GO:0007346,GO:0007568,GO:0007569,GO:0007623,GO:0008033,GO:0008150,GO:0008152,GO:0008287,GO:0008360,GO:0009266,GO:0009268,GO:0009314,GO:0009405,GO:0009408,GO:0009416,GO:0009451,GO:0009605,GO:0009607,GO:0009628,GO:0009648,GO:0009649,GO:0009790,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009909,GO:0009910,GO:0009966,GO:0009968,GO:0009987,GO:0009991,GO:0010467,GO:0010468,GO:0010562,GO:0010563,GO:0010564,GO:0010570,GO:0010605,GO:0010639,GO:0010646,GO:0010648,GO:0010948,GO:0015630,GO:0016043,GO:0016050,GO:0016070,GO:0016192,GO:0016301,GO:0016310,GO:0016311,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016788,GO:0016791,GO:0019216,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019747,GO:0019899,GO:0019900,GO:0019901,GO:0022402,GO:0022603,GO:0022604,GO:0022607,GO:0023051,GO:0023052,GO:0023057,GO:0030029,GO:0030036,GO:0030447,GO:0030588,GO:0030590,GO:0030865,GO:0030866,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031399,GO:0031400,GO:0031505,GO:0031667,GO:0031929,GO:0031974,GO:0031981,GO:0032101,GO:0032103,GO:0032104,GO:0032106,GO:0032107,GO:0032109,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032872,GO:0032873,GO:0032922,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033046,GO:0033047,GO:0033048,GO:0033554,GO:0034248,GO:0034250,GO:0034470,GO:0034599,GO:0034641,GO:0034660,GO:0035556,GO:0036168,GO:0036170,GO:0036171,GO:0036176,GO:0036177,GO:0036178,GO:0036180,GO:0036211,GO:0036244,GO:0040001,GO:0040007,GO:0040008,GO:0042221,GO:0042325,GO:0042326,GO:0042578,GO:0042594,GO:0042752,GO:0042762,GO:0043085,GO:0043153,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043408,GO:0043409,GO:0043412,GO:0043933,GO:0044085,GO:0044093,GO:0044182,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044419,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0044770,GO:0044772,GO:0044843,GO:0045229,GO:0045786,GO:0045828,GO:0045834,GO:0045839,GO:0045927,GO:0045930,GO:0045935,GO:0045936,GO:0045937,GO:0045981,GO:0046328,GO:0046329,GO:0046483,GO:0046889,GO:0046890,GO:0046907,GO:0047485,GO:0048193,GO:0048194,GO:0048199,GO:0048207,GO:0048208,GO:0048511,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048580,GO:0048581,GO:0048583,GO:0048584,GO:0048585,GO:0048831,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051093,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051176,GO:0051179,GO:0051193,GO:0051194,GO:0051196,GO:0051197,GO:0051234,GO:0051239,GO:0051241,GO:0051246,GO:0051248,GO:0051293,GO:0051341,GO:0051353,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051653,GO:0051656,GO:0051704,GO:0051716,GO:0051726,GO:0051783,GO:0051784,GO:0051983,GO:0051985,GO:0060255,GO:0061024,GO:0062012,GO:0062013,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070262,GO:0070302,GO:0070303,GO:0070887,GO:0071071,GO:0071073,GO:0071214,GO:0071467,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071852,GO:0071944,GO:0071963,GO:0072357,GO:0080090,GO:0080134,GO:0080135,GO:0090033,GO:0090114,GO:0090304,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0099568,GO:0104004,GO:0140096,GO:1900428,GO:1900430,GO:1900434,GO:1900436,GO:1900437,GO:1900439,GO:1900440,GO:1900442,GO:1900486,GO:1900490,GO:1900542,GO:1900544,GO:1900741,GO:1900743,GO:1901360,GO:1901564,GO:1902494,GO:1902531,GO:1902532,GO:1902850,GO:1903047,GO:1903293,GO:1903725,GO:1903727,GO:2000026,GO:2000241,GO:2000242,GO:2001210,GO:2001215,GO:2001251
EggNOG free text desc.phosphoprotein phosphatase activity
EggNOG OGsCOG0639@1,KOG0373@2759
EC3.1.3.16
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01009,ko03016,ko03400
Exons3
Model size444
Cds size444
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig15745.4012.1prot_L-elsbetiae_contig15745.4012.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig15745 582..3781 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815646.7764056-CDS-L-elsbetiae_contig15745:581..7491622815646.7764056-CDS-L-elsbetiae_contig15745:581..749Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15745 582..749 -
1691683012.2321532-CDS-L-elsbetiae_contig15745:581..7491691683012.2321532-CDS-L-elsbetiae_contig15745:581..749Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15745 582..749 -
1622815646.7867172-CDS-L-elsbetiae_contig15745:2833..29591622815646.7867172-CDS-L-elsbetiae_contig15745:2833..2959Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15745 2834..2959 -
1691683012.2437706-CDS-L-elsbetiae_contig15745:2833..29591691683012.2437706-CDS-L-elsbetiae_contig15745:2833..2959Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15745 2834..2959 -
1622815646.8027143-CDS-L-elsbetiae_contig15745:3631..37811622815646.8027143-CDS-L-elsbetiae_contig15745:3631..3781Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15745 3632..3781 -
1691683012.2551498-CDS-L-elsbetiae_contig15745:3631..37811691683012.2551498-CDS-L-elsbetiae_contig15745:3631..3781Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15745 3632..3781 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig15745.4012.1

>prot_L-elsbetiae_contig15745.4012.1 ID=prot_L-elsbetiae_contig15745.4012.1|Name=mRNA_L-elsbetiae_contig15745.4012.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=148bp
QVKDILIEENNVQMVRSPVTICGDIHGQFYDLLQLLAMGGNVPDTSYIFM
GDFVDRGHNSVETFQLLMALKARYPDCMTLLRGNHESRQITQVYGFYEEC
MRKYGNANPWKYCVDVFDHLNLAALVDNEVLCVHGGLSPEIRTLDQVR
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mRNA from alignment at L-elsbetiae_contig15745:582..3781-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig15745.4012.1 ID=mRNA_L-elsbetiae_contig15745.4012.1|Name=mRNA_L-elsbetiae_contig15745.4012.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3200bp|location=Sequence derived from alignment at L-elsbetiae_contig15745:582..3781- (Laminarionema elsbetiae ELsaHSoW15)
CAGGTGAAAGATATCTTGATCGAGGAGAACAACGTGCAGATGGTGCGGTC
GCCGGTGACTATCTGCGGGGACATCCACGGGCAGTTCTACGACTTGCTTC
AGCTGCTCGCTATGGGGGGCAACGTTCCCGACACGAGTTATATTTTTATG
GTGAGTTTTAGCGCACATACCTACCTATGTACAAATGTTTTTTACAGGTT
TGTTTTTTGTGGTGAGAGCGGGAAAGAAACACGAAGCACGGCACACCAAG
ATACTTCAACAGCAGCAGCAGCAGCAGCAGCCGCGTGTGGTATCTCTATC
TGTATGTGTCTCCTCCTCCTCCTCCCCCCCCCCCCCCCCCCCCCCCCCAC
CAGCACCACCCCTGTGGTTTTCCTCTCTTTTTTTGTTCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCTCTCTCTCCGCTCTCTCGCATGTGTTTCTTG
TTTTGGTGTTTGTTCTTTGGGAAGGCAGCTCCATATCCCGCACGTCTCAT
CGGCGTATTGGTTTGATGTCCATCCGCGGATTGACCGCATCCAGTGTTGG
ATAGTACGGACATTGAGAGGTACTGGATGGAGAGATCGGAACGGTTTTTT
AATGTGAAGACAACATACATACATACATACATACACGCACCCCGGTAGAG
CCACCCGCGTATGGTAACACCCACCTCTTTGTTTTTCGTCTTTTTCCCTC
ACTCTCTCTCTCTATCTCGGTGCGTGTATCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTGCCCTGCTCTCTCGTTTTTGTGTTTGTTT
TCTTTCTTTTTTTGGGGGGAAGGGGGACTTTGTTGACCGGGGGCACAACA
GCGTGGAGACCTTCCAGCTGCTTATGGCCCTCAAGGCGAGATATCCGGAC
TGCATGACGCTGCTGCGGGGGAACCACGAGTCAAGACAGATCACGCAGGT
GTGCACGAGGCCGCAAAAACGCTCTCCGCATTCCCCATCATTAGAGCTGC
ATATGAACGCATGGTACGTAACAGCCACCTATCGGACAATATCTCTCTTT
GTGTTTGCGCGACTGAACTACCGCAGTACATACAGCAGTATTTCTGCACC
AAAACTGGGGGGGTCTGGGGGGAGGGGTGCAAACGCCGAAGCCTTTAGGT
TTGCATGGTTTATTTTCTCTCGACGAGAAAACCAAAAGACTTGGAATAGT
AGTTTATTTTTTCCCCCTCCCATTATTGGCATATCCGTCGTCTGCCTCAC
TGGCCCCCATAGCCCCATAGTCCACTACGACTAGCTAGATGACCCAACCG
GGGTCACACAGGAGGGGTGGGGGTGGGGATGGACCCCCTCCTGCGGTGCC
TGCCCGTTATGTTTTTATCGCGAGCAGGGTTCAGCACTCCTCCCCACCCT
CGTCAGCAATGAAGTCGAAGTGTAGTGCAAAGGGGGGCAAAGGAAGGGAG
CACAAAACGTTTATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAGC
ACGCGCATAGTTTTCTTTTTTTTTACCGTTTTTTACACAGAATAAAACAC
CNNNNNNNNNNCCCCCCAAAACAAAAAAAAAAAAAAAAAAAAAAGAAAGA
AAAAGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAACGAAGCACGCGCATTGTTTGCTGTTTTATTA
CCGTATATGACACAAGATAACACACCCCCTGGACCGATTTTCAAAAGCTC
GATTACTCCGCAACTAGTTGTGATTCTATTGCCAAACGACTCGTTTTCGG
ACAGCTCTTGATGGGGTCTTTCCAACGCCGCCCTTTTCGGGACTGACAGC
TCTTCTCGCTGTCGAGTAACCGAGCTTTCGAAATCGGTCCAGGGGGTGTG
GTATACATTGTGTCATATACGGTATGTATGTATCGGTTTTCGTAACCCCG
GGCTACACGAGTTTTGTTTTGGAAACTCACCGTAGGTGACACAAGATACC
ACATATACATTGTGTCATATACGGTATGTATGTATCGGTTTTCGTAACCC
CGGGCTACACGAGTTTTGTTTTGGAAACTCACCGTAGGTGACACAAGATA
CCACACCCCCTGGACCGAACTTTAGAGCTCCATTACTCCGTAACGAAGAA
GGTGCCAGCACCAAGTAACACATTTTCGGACAGCCCTCGACTAGATCTTT
CTAACGCCATCTCTTTTAGCACTGGCACTCTTCTTGCTGAGGAGGAATAT
AGAGCTTTGAAAATCTGTCCAGGGGGTGTGGTATCTTGTGTCGCCTACGG
TACATATCTTGTCCGAGCCCATGTAAATAATATAAGAACGAATGGTAACG
ACACGGTTGCGGATTAACTCAACGCACCCAAGCTTGTATGTACGTCAATC
TTGTTCGAGGCGCGACACTGCAACGGGCGGTGTTGAGTTATGTACATGGG
TAAACACGATGTGTGTGTGCATGTGTGTGTGCATGTGTGTGTGCATGTGT
GCATGTGTGTGTTGTCCCAGGGACGGCAGAGGACGAAGCGATAACATACA
TACATGTATGATCATGAAGCAGTGAGCACGCGAGCTCATTCTCCTTCTCT
CTCTCTCCGGGGTCCACTCGTACCCCCCCCCCTCACATACACACACACGA
CCCCCCCCCCCCGAGGGAGCACACAGATCGGAATCGCGTATCAAGTAAAA
GCCACGAACAAATCTCAGCACTTCGAAGTATGTATAGAATAGAAGTATGT
ACATGTACCACCTGCTGCACACCCAACCAAACACGTGTGTTAATAGTCGT
CAGGTGTACGGGTTCTACGAGGAATGCATGGTTTCGTGCGCGGGCAGGGT
AGAGTACGGCGTACGCTGCCGTGTGTGCGCGAGAAACCTGGGCACACTAC
CCCGCACGCACGCAGAGCACAACCCCGACATGTATATCCACTGCTGTCCA
ATCAGCAGCTATCGATCAGAACAATTTCAGACGTAAAGATCCCTTCGCAC
GTTTGGTCATCCGTATGTACTGCTGTCGTCAGGTGTACGGGTTCTACGAG
GAGTGCATGCGCAAGTACGGCAACGCGAACCCCTGGAAGTACTGCGTGGA
CGTGTTCGACCACCTCAACCTCGCGGCTCTCGTGGACAACGAGGTGCTGT
GCGTACACGGAGGCTTGTCTCCGGAGATTCGAACACTTGATCAGGTGAGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig15745:582..3781-

>mRNA_L-elsbetiae_contig15745.4012.1 ID=mRNA_L-elsbetiae_contig15745.4012.1|Name=mRNA_L-elsbetiae_contig15745.4012.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=888bp|location=Sequence derived from alignment at L-elsbetiae_contig15745:582..3781- (Laminarionema elsbetiae ELsaHSoW15)
CAGGTGAAAGATATCTTGATCGAGGAGAACAACGTGCAGATGGTGCGGTC
GCCGGTGACTATCTGCGGGGACATCCACGGGCAGTTCTACGACTTGCTTC
AGCTGCTCGCTATGGGGGGCAACGTTCCCGACACGAGTTATATTTTTATG
CAGGTGAAAGATATCTTGATCGAGGAGAACAACGTGCAGATGGTGCGGTC
GCCGGTGACTATCTGCGGGGACATCCACGGGCAGTTCTACGACTTGCTTC
AGCTGCTCGCTATGGGGGGCAACGTTCCCGACACGAGTTATATTTTTATG
GGGGACTTTGTTGACCGGGGGCACAACAGCGTGGAGACCTTCCAGCTGCT
TATGGCCCTCAAGGCGAGATATCCGGACTGCATGACGCTGCTGCGGGGGA
ACCACGAGTCAAGACAGATCACGCAGGGGGACTTTGTTGACCGGGGGCAC
AACAGCGTGGAGACCTTCCAGCTGCTTATGGCCCTCAAGGCGAGATATCC
GGACTGCATGACGCTGCTGCGGGGGAACCACGAGTCAAGACAGATCACGC
AGGTGTACGGGTTCTACGAGGAGTGCATGCGCAAGTACGGCAACGCGAAC
CCCTGGAAGTACTGCGTGGACGTGTTCGACCACCTCAACCTCGCGGCTCT
CGTGGACAACGAGGTGCTGTGCGTACACGGAGGCTTGTCTCCGGAGATTC
GAACACTTGATCAGGTGAGGGTGTACGGGTTCTACGAGGAGTGCATGCGC
AAGTACGGCAACGCGAACCCCTGGAAGTACTGCGTGGACGTGTTCGACCA
CCTCAACCTCGCGGCTCTCGTGGACAACGAGGTGCTGTGCGTACACGGAG
GCTTGTCTCCGGAGATTCGAACACTTGATCAGGTGAGG
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