mRNA_L-elsbetiae_contig1563.3942.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1563.3942.1 vs. uniprot
Match: D7FZF9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZF9_ECTSI) HSP 1 Score: 669 bits (1727), Expect = 2.120e-230 Identity = 383/545 (70.28%), Postives = 433/545 (79.45%), Query Frame = 1 Query: 163 RRNGMAARGTGALRLAALA----VAARSVTAIDCPPLDLVNYNLTDYIRYSTTSDMMYLENGACVTMEDIFHARIDSFTNENKGPVYPFDEMTQQITTNFTGSWYLGSSLFVTEGSRLVMRGSAKGGDCDHLLLASSPDKFIQIRAHGGEILIDGTHVESWDIEAGGVDEDIGDGRSYLSAISEVITNPLETCDGRAKNNMGEARLDIIDSEINHLGYYESESYGIAYKVRGFCKDLSNTEIFDKVSVTGDILNSHIHHLYFGHYSYGHQGGNWSYNEVHDNIGYGFDPHDDSDNVTISNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHIDDEGKPTGNGIMLXXXXXXXXXXXXXXXXNFDSGVALYESSGCEVSRNELYGNKNGIRMSMGSSDNVASNNNININGEDEKYAIYLYRGSDEPDVEGSDGRPRRNHVHGNNITSDDAVVMMRNTDDNIIEDNAIVGMSSRFVDSMNTLWVGNDVPDAHQFLVEDGSCFDPDSDMDAPADEEG-------------YSYAFDHDYTEGFFCGI 1746 R NG AA+ A+ +AA AA + A +CPP+DLVN+N+TDYIR+ST SD +YLENGAC TM DI+ +RID++T ENKGPVYPFDE T IT N TGSWYLGSSL+VTEG+RLV++G +KGGDCDHLLLASS +KFI +RA+GGEI++DGTHVESWD+ G VDE+ DGRSYLSAISEVI NP C+G A N+MGEAR+DIIDSEINHLG+YESESYGIAYKVRGFC DLSN E+F+ V VTGDIL SHIHHLYFGHYSYGHQGGNWSYN VHDN+GYGFDPHDDSD VTISNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGH+ D GK TGNGIML XXXXXXXXXX N DSGVA+YESS CE+S+N L NKNGIRMSMGS++N+A N+I INGEDE+YAIYLYRG+D P VEGSDGRPR N V N++ SD+AVVM RN DDNIIE N I G SRFVDS NTLW GN VPD H+F +EDGSCFDP+SDMD A E G EGFFCG+ Sbjct: 8 RPNGAAAKKIVAVLVAAALGNTRSAAATTVATNCPPMDLVNHNITDYIRWSTMSDRLYLENGACATMTDIYESRIDTYTGENKGPVYPFDETTGGITNNVTGSWYLGSSLYVTEGARLVVQGLSKGGDCDHLLLASSAEKFINVRAYGGEIMLDGTHVESWDLLEGTVDENYDDGRSYLSAISEVIINPAMECEGMATNDMGEARMDIIDSEINHLGHYESESYGIAYKVRGFCNDLSNPELFETVGVTGDILGSHIHHLYFGHYSYGHQGGNWSYNTVHDNVGYGFDPHDDSDYVTISNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHVTDAGKITGNGIMLHXXXXXXXXXXNVVENNMDSGVAVYESSNCEISQNNLSRNKNGIRMSMGSANNLAFENHIVINGEDERYAIYLYRGNDTPAVEGSDGRPRNNRVFDNSLMSDNAVVMARNADDNIIEGNTIFGRESRFVDSFNTLWYGNSVPDVHEFKLEDGSCFDPESDMDYVAGEAGGGXXXXXXXXXXXXXXXXXXXXEEGFFCGV 552
BLAST of mRNA_L-elsbetiae_contig1563.3942.1 vs. uniprot
Match: D7FZF8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZF8_ECTSI) HSP 1 Score: 584 bits (1505), Expect = 7.670e-197 Identity = 343/513 (66.86%), Postives = 402/513 (78.36%), Query Frame = 1 Query: 247 DCPPLDLVNYNLTDYIRYSTTSDMMYLENGACVTMEDIFHARIDSFTNENKGPVYPFDEMTQQITTNFTGSWYLGSSLFVTEGSRLVMRGSAKGGDCDHLLLASSPDKFIQIRAHGGEILIDGTHVESWDIEAGGVDEDIGDGRSYLSAISEVITNPLETCDGRAKNNMGEARLDIIDSEINHLGYYESESYGIAYKVRGFCKDLSNTEIFDKVSVTGDILNSHIHHLYFGHYSYGHQGGNWSYNEVHDNIGYGFDPHDDSDNVTISNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHIDDEGKPTGNGIMLXXXXXXXXXXXXXXXXNFDSGVALYESSGCEVSRNELYGNKNGIRMSMGSSDNVASNNNININGEDEKYAIYLYRGSDEPDVEGSDGRPRRNHVHGNNITSDDAVVMMRNTDDNIIEDNAIVGMSSRFVDSMNTLWVGNDVPDA-HQFLVEDGSCFDPDSDMDAPADEEGYSYAFDHDYT--------------EGFFC 1740 DC +DLVN+N+TDYIR+S SD +YLENGACVT+ DI+ +R+D NKGP+YPFDE T I+ TGSWYL S+L++TEGSRLV++G +KGGDCDHLLLASSP+KFI +RAHGGE+++DGTHVESWD+ AG VDE+ DGRSYLSAISEVIT+P ETCDG AKN+MGEAR+DIIDSE+NHLG+Y+SESYGIAYKVRGFCKDLSN E+FD VSVTGDIL S IH YFGHYSYGHQGGNWS+N++H NIGYGFDPHDDSD +TI NN XXXXXXXXXXXXXXXXXXXXXXXXXXXGHI++ G+ TGN XXXXXXXXXXXXXXXX DSGVALYESS C VS N++YGNKNGIRMS+GSSDN+ N+I ING D KYAIYLY+G+D PDV SDGRPR NH+ N++ SD+ VV M N+DD E N + G SRF DS NTLW N V D H + +E SCFDP+SD++ P E + + + T GFFC Sbjct: 50 DCTSMDLVNHNITDYIRWSNMSDRLYLENGACVTLTDIYESRLDD--TGNKGPLYPFDETTLDISDTVTGSWYLESTLYITEGSRLVVQGLSKGGDCDHLLLASSPEKFINLRAHGGELMLDGTHVESWDLAAGTVDENNEDGRSYLSAISEVITDPAETCDGTAKNDMGEARMDIIDSEVNHLGWYDSESYGIAYKVRGFCKDLSNPELFDSVSVTGDILGSDIHDNYFGHYSYGHQGGNWSHNKMHHNIGYGFDPHDDSDYITIHNNEVXXXXXXXXXXXXXXXXXXXXXXXXXXXGHINEAGQRTGNXXXXXXXXXXXXXXXXXXXXXMDSGVALYESSYCAVSDNKIYGNKNGIRMSLGSSDNLLYENDIIINGPDAKYAIYLYQGNDIPDV--SDGRPRNNHIFDNSLVSDNEVVKMLNSDDTAFEGNVVYGRVSRFKDSFNTLWKSNFVEDGIHDYKLELNSCFDPESDIEEPDTYEDVAAMEEEEATTYXXXXXXXXXVSESGFFC 558
BLAST of mRNA_L-elsbetiae_contig1563.3942.1 vs. uniprot
Match: A0A6H5KBD3_9PHAE (MEP17 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBD3_9PHAE) HSP 1 Score: 524 bits (1350), Expect = 6.710e-174 Identity = 325/506 (64.23%), Postives = 380/506 (75.10%), Query Frame = 1 Query: 322 YLENGACVTMEDIFHARIDSFTNENKGPVYPFDEMTQQITTNFTGSWYLGSSLFVTEGSRLVMRGSAKGGDCDHLLLASSPDKFIQIRAHGGEILIDGTHVESWDIEAGGVDEDIGDGRSYLSAISEVITNPLETCDGRAKNNMGEARLDIIDSEINH--------------------LGYYESESYGIAYKVRGFCKDLSNTEIFDKVSVTGDILNSHIHHLYFGHYSYGHQGGNWSYNEVHDNIGYGFDPHDDSDNVTISNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHIDDEGKPTGNGIMLXXXXXXXXXXXXXXXXNFDSGVALYESSGCEVSRNELYGNKNGIRMSMGSSDNVASNNNININGEDEKYAIYLYRGSDEPDVEGSDGRPRRNHVHGNNITSDDAVVMMRNTDDNIIEDNAIVGMSSRFVDSMNTLWVGNDVPDA-HQFLVEDGSCFDPDSDMDAP---------ADEEG--YSYAFDHDYTE-GFFC 1740 YLENGACVT+ DI+ +R D + NKGP+YPFDE I+ TGSWYL SSL++TEGSRLV++G +KGGDCDHLLLASSP+KFI +RAHGGE+++DGTHVESWD+ AG VDE+ DGRSYLSAISEVIT+P ETCDG AKN+MGEAR+DIIDSE+N LG+Y+SESYGI+YKVRGFC DLSN E+FD VSVTGDIL S IH YFGHYSYGHQGGNWS+N++H NIGYGFDPHDDSD +TI NN XXXXXXXXXXXXXXXXXXXXXXXXXXGHI++ G+ TGN XXXXXXXXXXXXXXXX DSGVALYESS C VS N++YG+KNGIRMS+GSSDN+ N+I ING D KYAIYLY+G+D PDV SDGR R NH+ N++ SD+ VV M N+DD E N + G SRF +S NTLW N V D H + +E SCFDP+SD++ P +EE YS D +E GFFC Sbjct: 35 YLENGACVTLTDIYESRSDD--SGNKGPLYPFDETALDISDTVTGSWYLESSLYITEGSRLVVQGLSKGGDCDHLLLASSPEKFINVRAHGGELMLDGTHVESWDLAAGTVDENNEDGRSYLSAISEVITDPTETCDGTAKNDMGEARMDIIDSEVNRTTQTSHSAPLTSRLPQYKTDLGWYDSESYGISYKVRGFCTDLSNPELFDSVSVTGDILGSDIHDNYFGHYSYGHQGGNWSHNKMHHNIGYGFDPHDDSDYLTIHNNEVYXXXXXXXXXXXXXXXXXXXXXXXXXXGHINEAGQRTGNXXXXXXXXXXXXXXXXXXXXXMDSGVALYESSYCAVSDNKIYGSKNGIRMSLGSSDNLLYENDIIINGPDAKYAIYLYQGNDIPDV--SDGRLRNNHIFDNSLVSDNQVVKMLNSDDTAFEGNVVYGRVSRFKNSFNTLWKSNFVEDGIHDYKLELNSCFDPESDIEEPDTYEDVAAMEEEEATTYSXXXXFDVSESGFFC 536
BLAST of mRNA_L-elsbetiae_contig1563.3942.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 323 bits (828), Expect = 6.260e-97 Identity = 196/472 (41.53%), Postives = 264/472 (55.93%), Query Frame = 1 Query: 292 IRYSTTSDMMYLEN------GACVTMEDIFHARIDSFTNENKGPVYPFDEMTQQITTNFTGSWYLGSSLFVTEGSRLVMRGSAKGGDCDHLLLASSPDKFIQIRAHGGEILIDGTHVESWDIEAGGVDEDIGDGRSYLSAISEVITNPLETCDGRAKNNMGEARLDIIDSEINHLGYYESESYGIAYKVRGFCKDLSNTEIFDKVSVTGDILNSHIHHLYFGHYSYGHQGGNWSYNEVHDNIGYGFDPHDDSDNVTISNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHIDDEGKPTGNGIMLXXXXXXXXXXXXXXXXNFDSGVALYESSGCEVSRNELYGNKNGIRMSMGSSDNVASNNNININGEDEKYAIYLYRGSDEPDVEGSDGRPRRNHVHGNNITSDDAVVMMRNTD-----DNIIEDNAIVGMSSRFVDSMNTLWVGNDVPDAHQF--LVEDGSCFDPDSD 1668 IRY+ T+ +YLE+ G C T+ I+ +R K P+Y D + ++ TG+W L L+V +G L + G+ +GGD D L L S+ + +I +RAHGG + GT V SWD DED DGRSY+SA+SE++T+ ETC+G AKN MGEAR+DI +SEI +LG+ +SESYG+ +KVRGFCKD SN EIFD V+V G++ +S IHHL FG Y+YGHQ G+W N++HDN GYGFDPHDDSD +TI +N G+ G T GI L N D+G+A+ ES +VS N NK G+RMS+G +DNV S N I+ N KY Y Y GSDEPDV S GR + N N+ + + + ++ D DN+ E G+ RF D+MN++ GN D F V + SCFD +SD Sbjct: 51 IRYAGTTKRLYLESADGETRGGCATLGQIWESRA------GKAPLYAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQ-------GNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNS---KYNAYTYLGSDEPDVVSS-GRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGDFELKVTNDSCFDGESD 505
BLAST of mRNA_L-elsbetiae_contig1563.3942.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI) HSP 1 Score: 323 bits (827), Expect = 7.780e-97 Identity = 195/473 (41.23%), Postives = 265/473 (56.03%), Query Frame = 1 Query: 292 IRYSTTSDMMYLEN-------GACVTMEDIFHARIDSFTNENKGPVYPFDEMTQQITTNFTGSWYLGSSLFVTEGSRLVMRGSAKGGDCDHLLLASSPDKFIQIRAHGGEILIDGTHVESWDIEAGGVDEDIGDGRSYLSAISEVITNPLETCDGRAKNNMGEARLDIIDSEINHLGYYESESYGIAYKVRGFCKDLSNTEIFDKVSVTGDILNSHIHHLYFGHYSYGHQGGNWSYNEVHDNIGYGFDPHDDSDNVTISNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHIDDEGKPTGNGIMLXXXXXXXXXXXXXXXXNFDSGVALYESSGCEVSRNELYGNKNGIRMSMGSSDNVASNNNININGEDEKYAIYLYRGSDEPDVEGSDGRPRRNHVHGNNITSDDAVVMMRNTD-----DNIIEDNAIVGMSSRFVDSMNTLWVGNDVPDAHQF--LVEDGSCFDPDSD 1668 IRY+ T+ +YLE+ G CVT+ I+ +R KGP+Y D + ++T+ TG+W L L+V +G L + GS GGD D L L S+ + FI +RAHGG + T V SWD DED DGRSY+SAISE+IT+ ETC+G AKN MGEAR+DI SEI +LGY++SESYG+ +KVRGFC+D SN E+FD V+V G++ +S IHH+ FG Y+YGHQ G+W N++HDN GYGFDPHDDSD +TI +N G+ G T GI L N D+G+A+ ES +VS N NK G+R S+G +DNV SNN I+ N E Y Y Y G+DEPDV S GR + N N+ + + + ++ D DN+ E G+ RF ++ L GN D +F V++ +CFD ++D Sbjct: 46 IRYAGTTARLYLESADNGTTRGGCVTLGQIWESRA------GKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQ-------GNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAE---YNAYSYLGTDEPDVVSS-GRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGEAD 501
BLAST of mRNA_L-elsbetiae_contig1563.3942.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE) HSP 1 Score: 303 bits (775), Expect = 2.050e-89 Identity = 208/471 (44.16%), Postives = 272/471 (57.75%), Query Frame = 1 Query: 292 IRYSTTSDMMYLEN------GACVTMEDIF-HARIDSFTNENKGPVYPFDEMTQQITTNFTGSWYLGSSLFVTEGSRLVMRGSAKGGDCDHLLLASSPDKFIQIRAHGGEILIDGTHVESWDIEAGGVDEDIGDGRSYLSAISEVITNPLETCDGRAKNNMGEARLDIIDSEINHLGYYESESYGIAYKVRGFCKDLSNTEIFDKVSVTGDILNSHIHHLYFGHYSYGHQGGNWSYNEVHDNIGYGFDPHDDSDNVTISNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHIDDEGKPTGNGIMLXXXXXXXXXXXXXXXXNFDSGVALYESSGCEVSRNELYGNKNGIRMSMGSSDNVASNNNININGEDEKYAIYLYRGSDEPDVEGSDGRPRRNHVHGNNITSDDAVVMMRNTD-----DNIIEDNAIVGMSSRFVDSMNTLWVGNDVPDAHQFLVEDGSCFDPDSD 1668 IRYS+ + +YLE+ G CVT+E I+ H R + P+Y D + I+ + TG+W L LFV +G L + G++ GGD D L L S+ D FI +RAHGG + T V +WD G D D DGRSY+SA+SEVIT+ +TC+GRAKNNMGEAR+DI DSE+ +LGY+ SESYG+ +KVRGFC D SN ++F+ V+V G+I +S IHH FG Y+YGHQ G+W N++HDN GYGFDPHDDSD +TI +N G+ G + GI L XXXXXXXXXXXXXX D+G+A+ ES +VS N NK GIR S+GS NV NN I+ + +Y+ Y Y GSD PDV S GR + N NNI + + + D DN ED + RF D+ TL GN + + V +G+ FD SD Sbjct: 44 IRYSSVYERLYLESADSKTRGGCVTLEQIWEHQR-------GEAPLYAVDSKSGDISDSATGTWLLTEELFVEDGITLKVHGTSAGGDADELRLLSTSDTFINLRAHGGSLDFLSTKVFAWDTSINGPDRDEEDGRSYVSAVSEVITDDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYDNGYHGIIASKRCNGVSIQ-------GNEVYGGATSSAGIFLHRXXXXXXXXXXXXXXXXDAGLAMMESFNADVSDNIFENNKYGIRFSVGSGRNVFFNNVISGST---RYSTYSYLGSDAPDVVDS-GRSQDNVFQENNIIGGVESIKLLDADGTQFIDNTFEDATTI----RFNDAKKTLMSGNIGLNMSKLKVVNGASFDASSD 492
BLAST of mRNA_L-elsbetiae_contig1563.3942.1 vs. uniprot
Match: D8LD45_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD45_ECTSI) HSP 1 Score: 302 bits (773), Expect = 5.160e-88 Identity = 179/469 (38.17%), Postives = 255/469 (54.37%), Query Frame = 1 Query: 292 IRYSTTSDMMYLE------NGACVTMEDIFHARIDSFTNENKGPVYPFDEMTQQITTNFTGSWYLGSSLFVTEGSRLVMRGSAKGGDCDHLLLASSPDK-------FIQIRAHGGEILIDGTHVESWDIEAGGVDEDIGDGRSYLSAISEVITNPLETCDGRAKNNMGEARLDIIDSEINHLGYYESESYGIAYKVRGFCKDLSNTEIFDKVSVTGDILNSHIHHLYFGHYSYGHQGGNWSYNEVHDNIGYGFDPHDDSDNVTISNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHIDDEGKPTGNGIMLXXXXXXXXXXXXXXXXNFDSGVALYESSGCEVSRNELYGNKNGIRMSMGSSDNVASNNNININGEDEKYAIYLYRGSDEPDVEGSDGRPRRNHVHGNNITSDDAVVMMRNTDDNIIEDNAIVGMSS-RFVDSMNTLWVGN-DVPDAHQFLVEDGSCF 1653 IRYS T+ +YLE G CVT+E I+ AR T K P+Y D ++ + + TG+W L L+V +G L + G+ GG D L L S+P +I +RAHGG + + T V WD D D DGRSY+SA+SE++ +P +TC+G AKN MGEAR+DI++SE+ ++G+++SESYG+ +KVRGFCKD SN E+FD+V+V G+I +S +HH+ F Y+YGHQ G+W N VH N GYG+DPHDDSD +TI +N G+I G T GI L N D+G+A+ ESS E+S N GNK GIRMS+G DN SNN + + YAIY Y+GSD +V+ + GR + N N + + ++ +D I +N F ++ + GN + DA + + + +CF Sbjct: 123 IRYSATTGRLYLEAGVEGERGGCVTVEQIWEARGGGTTTGAKAPLYAVDPVSGEYSDVITGTWLLEEDLYVEDGITLKVWGNGSGGYADELRLKSTPPTEDGGNGTYINLRAHGGSLDFEHTKVFGWDTTNNSYDMDETDGRSYISAVSEIVLDPTQTCEGNAKNTMGEARMDIVNSEMGYMGFHDSESYGLTWKVRGFCKDKSNPEVFDQVNVYGNIYDSELHHMNFAVYTYGHQQGDWRRNTVHSNSGYGYDPHDDSDFLTIHDNVVYDNNWHGIIASKRCNNVSIQ-------GNIVYGGNDTSAGIFLHRSSDYAVVKDNHCYGNGDAGMAMLESSNAEISGNIFEGNKYGIRMSVGCRDNFVSNNTMTNTSQ---YAIYTYQGSDPAEVQPT-GRSQDNIFDSNTVVGGPQAIKLKESDGTRITNNVFYEPGLVEFSNTTENVVTGNVGLEDATEVELVEPACF 580
BLAST of mRNA_L-elsbetiae_contig1563.3942.1 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA) HSP 1 Score: 298 bits (764), Expect = 7.940e-88 Identity = 197/466 (42.27%), Postives = 254/466 (54.51%), Query Frame = 1 Query: 292 IRYSTTSDMMYLEN------GACVTMEDIFHARIDSFTNENKGPVYPFDEMTQQITTNFTGSWYLGSSLFVTEGSRLVMRGSAKGGDCDHLLLASSPDKFIQIRAHGGEILIDGTHVESWDIEAGGVDEDIGDGRSYLSAISEVITNPLETCDGRAKNNMGEARLDIIDSEINHLGYYESESYGIAYKVRGFCKDLSNTEIFDKVSVTGDILNSHIHHLYFGHYSYGHQGGNWSYNEVHDNIGYGFDPHDDSDNVTISNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHIDDEGKPTGNGIMLXXXXXXXXXXXXXXXXNFDSGVALYESSGCEVSRNELYGNKNGIRMSMGSSDNVASNNNININGEDEKYAIYLYRGSDEPDVEGSDGRPRRNHVHGNNITSDDAVVMMRNTDDNIIEDNAIVGMSS-RFVDSMNTLWVGNDVPDAHQFLVEDGSCFDPDSD 1668 IRYS TS +YLE+ G CVT+EDI+ + P+Y + ++++ TG+W L SL+V +G L + G + GG D L L S+ FI +RAHGG + T V +WD V D GRSY+SA+SEVIT+ + CDGRAK NMGEAR+DI DSE+ +LGY+ SESYG+ +KVRG C+DLSN E+FD V+V G+I +S IHH YFG Y+YGH+ G+W N++H N YGFDPHDDSD +TI +N XXXXXXXXXX G GI L N D+G+AL E+ +VS N+ NK GIRMS+G +DNV S N+I + KY +Y Y+GSD P V S GR + + V + D DN + RF D TL GN V DGSCFD SD Sbjct: 44 IRYSKTSKRLYLESADGNTRGGCVTLEDIWRDL------DGGAPLYAVKPSSGDVSSSITGTWLLTESLYVEDGITLQVHGKSAGGKADELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDDSKGRSYISAVSEVITDSKQKCDGRAKKNMGEARMDIEDSEMAYLGYFGSESYGLTWKVRGLCRDLSNLEVFDAVNVYGNIYDSDIHHNYFGVYTYGHEQGDWRRNKMHHNTEYGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCNGXXXXXXXXXX-------GAAKSVGIFLHRSSDDAIVKDNYVHDNGDAGMALMETFNADVSNNKFEDNKYGIRMSVGCADNVFSKNDITGSS---KYNVYTYQGSDAPWVVDS-GRSQDXXXXXXXXSGGQETVKLTMADGTEFIDNTFKSAKTIRFEDCQGTLMSGNSGLGGASLKVTDGSCFDKKSD 492
BLAST of mRNA_L-elsbetiae_contig1563.3942.1 vs. uniprot
Match: D7FXE5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE5_ECTSI) HSP 1 Score: 291 bits (744), Expect = 3.640e-86 Identity = 163/371 (43.94%), Postives = 216/371 (58.22%), Query Frame = 1 Query: 292 IRYSTTSDMMYLEN-------GACVTMEDIFHARIDSFTNENKGPVYPFDEMTQQITTNFTGSWYLGSSLFVTEGSRLVMRGSAKGGDCDHLLLASSPDKFIQIRAHGGEILIDGTHVESWDIEAGGVDEDIGDGRSYLSAISEVITNPLETCDGRAKNNMGEARLDIIDSEINHLGYYESESYGIAYKVRGFCKDLSNTEIFDKVSVTGDILNSHIHHLYFGHYSYGHQGGNWSYNEVHDNIGYGFDPHDDSDNVTISNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHIDDEGKPTGNGIMLXXXXXXXXXXXXXXXXNFDSGVALYESSGCEVSRNELYGNKNGIRMSMGSSDNVASNNNININGE 1383 IRY+ ++ +YLE+ G CVT+ I+ +R KGP+Y D + ++T+ TG+W L L+V +G L + GS GGD D L L S+ + FI +RAHGG + T V SWD DED DGRSY+SAISE+IT+ ETC+G AKN MGEAR+DI SEI +LGY++SESYG+ +KVRGFC+D SN E+FD V+V G++ +S IHH+ FG Y+YGHQ G+W N++HDN GYGFDPHDDSD +TI +N G+ G T GI L N D+G+A+ ES +VS N NK G+R S+G +DNV SNN I+ N E Sbjct: 46 IRYAESTARLYLESADNGTTRGGCVTLGQIWESRA------GKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLEVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQ-------GNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAE 403
BLAST of mRNA_L-elsbetiae_contig1563.3942.1 vs. uniprot
Match: Q7XAK2_9PHAE (Mannuronan C-5-epimerase n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK2_9PHAE) HSP 1 Score: 293 bits (750), Expect = 8.970e-86 Identity = 212/468 (45.30%), Postives = 280/468 (59.83%), Query Frame = 1 Query: 292 IRYSTTSDMMYLEN------GACVTMEDIFHARIDSFTNENKGPVYPFDEMTQQITTNFTGSWYLGSSLFVTEGSRLVMRGSAKGGDCDHLLLASSPDKFIQIRAHGGEILIDGTHVESWDIEAGGVDEDIGDGRSYLSAISEVITNPLETCDGRAKNNMGEARLDIIDSEINHLGYYESESYGIAYKVRGFCKDLSNTEIFDKVSVTGDILNSHIHHLYFGHYSYGHQGGNWSYNEVHDNIGYGFDPHDDSDNVTISNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHIDDEGKPTGNGIMLXXXXXXXXXXXXXXXXNFDSGVALYESSGCEVSRNELYGNKNGIRMSMGSSDNVASNNNININGEDEKYAIYLYRGSDEPDVEGSDGRPRRNHVHGNNITSDDAVVMMRNTDDNIIEDNAIV-GMSSRFVDSMNTLWVGNDVPDAHQFLVEDGSCFDPDSDMD 1674 IRYS +S +YLE+ G CVT+E+I+ + P+Y + ++++ TG+W L L+V +G L + G++ GG+ + L L S+ FI +RAHGG + T V +WD V D RSY+SA+SE+IT+ E CDG+AK MGEAR+DI DSE+ +LGY SESYG+ +KVRGFCKD SN E+FD+V+V G+I +S IHH +FG Y+YGH+ G+W N++H N YGFDPHDDSD +TI +N XXXXXXXXXXXXXXXXXXXXXXXXXX G GI L XXXXN D+G+AL ES +VS N+ NK G+R+S+G +DNV S N I+ + KY +Y Y GSD+P V S GR + N N IT D + + D DN ++RF D+ TL GN + V G+CFD SD D Sbjct: 47 IRYSASSKRLYLESADGKTRGGCVTLEEIWKDL------DGSAPLYAVKPSSGDVSSSATGTWLLTEDLYVEDGITLQVHGTSAGGNANELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDGSKARSYISAVSEIITDSKEKCDGKAKKTMGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNREYGFDPHDDSDFLTIHDNKVXXXXXXXXXXXXXXXXXXXXXXXXXX-------GSSKSVGIFLHRSSDDAIVKDNXXXXNGDAGMALMESFNADVSNNKFEDNKYGVRLSVGCADNVFSKNVIS---DSSKYNVYTYEGSDDPWVVDS-GRSQDNIFSDNTITGGDESIKLTMADGTEFIDNTFKRAKTARFEDAETTLMSGNTGLGSATLKVSKGACFDKKSDSD 497 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1563.3942.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1563.3942.1 >prot_L-elsbetiae_contig1563.3942.1 ID=prot_L-elsbetiae_contig1563.3942.1|Name=mRNA_L-elsbetiae_contig1563.3942.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=533bp MRAARRNGMAARGTGALRLAALAVAARSVTAIDCPPLDLVNYNLTDYIRYback to top mRNA from alignment at L-elsbetiae_contig1563:6316..11241- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1563.3942.1 ID=mRNA_L-elsbetiae_contig1563.3942.1|Name=mRNA_L-elsbetiae_contig1563.3942.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4926bp|location=Sequence derived from alignment at L-elsbetiae_contig1563:6316..11241- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1563:6316..11241- >mRNA_L-elsbetiae_contig1563.3942.1 ID=mRNA_L-elsbetiae_contig1563.3942.1|Name=mRNA_L-elsbetiae_contig1563.3942.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3198bp|location=Sequence derived from alignment at L-elsbetiae_contig1563:6316..11241- (Laminarionema elsbetiae ELsaHSoW15)back to top |