prot_L-elsbetiae_contig1037.392.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1037.392.1
Unique Nameprot_L-elsbetiae_contig1037.392.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length297
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig1037.392.1 vs. uniprot
Match: D7FJI6_ECTSI (MORN repeat variant family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJI6_ECTSI)

HSP 1 Score: 276 bits (707), Expect = 4.780e-82
Identity = 137/161 (85.09%), Postives = 145/161 (90.06%), Query Frame = 0 
Query:  129 GGVGPFAFPPEAPMFVLPLAGLSAARCFPKYQNAMSSGALVPYDSLDRNNAFVVFVSHRWVNESSRPTGFRQHAAAGGDGDGTPDVDSAKHAFLVEGLSSILASLPREVAVFLWIDFSCIDQDNEESKRKGARSLAAYMQLSDAVFTPYAEILYPSSGGEG 289
            GGVGPFAFPPEAPMFVLPL GLSAAR FPKYQNAM SGALVPYDSLDRN+AFVVFVSHRW+NESSRPT F +H      G+G+PDVDSAKH FLVEGL SILASLPREVAVFLWID+SCIDQ+N ESKRKGARS+AAYMQLSDAVFTPYAE LYPSSGG G
Sbjct:  106 GGVGPFAFPPEAPMFVLPLTGLSAARSFPKYQNAMRSGALVPYDSLDRNSAFVVFVSHRWINESSRPTEFWKHGGGQDFGEGSPDVDSAKHTFLVEGLHSILASLPREVAVFLWIDYSCIDQENPESKRKGARSVAAYMQLSDAVFTPYAESLYPSSGGGG 266
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1037.392.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FJI6_ECTSI4.780e-8285.09MORN repeat variant family protein n=2 Tax=Ectocar... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1037contigL-elsbetiae_contig1037:11754..12980 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1037.392.1mRNA_L-elsbetiae_contig1037.392.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1037 11754..12980 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1037.392.1 ID=prot_L-elsbetiae_contig1037.392.1|Name=mRNA_L-elsbetiae_contig1037.392.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=297bp
RRNERAKAKSGEGTFSLPPSPSGSIEDATGEKNSAAASSQLAEALAEAPV
ATVHIVSSREGEGTPSATRGRGVGMPPVMGAKSAGALSQPSPSTPRTEES
SPSTASLAPVPVVQTPIRSSSWLSSARRGGVGPFAFPPEAPMFVLPLAGL
SAARCFPKYQNAMSSGALVPYDSLDRNNAFVVFVSHRWVNESSRPTGFRQ
HAAAGGDGDGTPDVDSAKHAFLVEGLSSILASLPREVAVFLWIDFSCIDQ
DNEESKRKGARSLAAYMQLSDAVFTPYAEILYPSSGGEGEARTGSG*
back to top