mRNA_L-elsbetiae_contig1520.3715.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1520.3715.1 vs. uniprot
Match: D8LEZ1_ECTSI (Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEZ1_ECTSI) HSP 1 Score: 159 bits (401), Expect = 7.060e-44 Identity = 81/113 (71.68%), Postives = 87/113 (76.99%), Query Frame = 1 Query: 4 VLRETRGFDVAKGETTHLRRKEGSVDYRFCPEPDLPPLFVADEHVSALKAAMPELPEATMARFKRDYGLPEHLSRLIVCAAGGASGYFEDLVNGR-------TGEGREGLRRD 321 + RETRGFDV+KGET HLRRKEGSVDYRF PEPDLPPL V EHV AL+A +PELPEATMAR +YGL EHLSRLIVCAAGGAS Y+EDLVNG GEG RRD Sbjct: 292 IERETRGFDVSKGETIHLRRKEGSVDYRFFPEPDLPPLVVTHEHVEALRATLPELPEATMARLSAEYGLAEHLSRLIVCAAGGASDYYEDLVNGTGRERGHAAGEGSGPYRRD 404
BLAST of mRNA_L-elsbetiae_contig1520.3715.1 vs. uniprot
Match: W7TQ61_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQ61_9STRA) HSP 1 Score: 100 bits (248), Expect = 2.260e-22 Identity = 51/102 (50.00%), Postives = 69/102 (67.65%), Query Frame = 1 Query: 4 VLRETRGFDVAKGETTHLRRKEGSVDYRFCPEPDLPPLFVADEHVSALKAAMPELPEATMARFKRDYGLPEHLSRLIVCAAGGASGYFEDLVNGRTGEGREG 309 V RETR F+ A GETT +R KEG+VDYRF PEPDLPPL + + V A++ +PELP+AT +R ++GL + +++ A G+FED+V G G GREG Sbjct: 263 VERETRAFNAATGETTRMRGKEGAVDYRFFPEPDLPPLVLDMDWVEAVRRGLPELPQATRSRLVEEHGLTPAQAEVLIGEGEAAVGFFEDVVRG--GGGREG 362
BLAST of mRNA_L-elsbetiae_contig1520.3715.1 vs. uniprot
Match: UPI001999D0CC (Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB n=1 Tax=Rhizobacter sp. TaxID=1909292 RepID=UPI001999D0CC) HSP 1 Score: 95.1 bits (235), Expect = 1.140e-20 Identity = 43/92 (46.74%), Postives = 64/92 (69.57%), Query Frame = 1 Query: 4 VLRETRGFDVAKGETTHLRRKEGSVDYRFCPEPDLPPLFVADEHVSALKAAMPELPEATMARFKRDYGLPEHLSRLIVCAAGGASGYFEDLV 279 +L++TR FD KG T LR KE + DYR+ PEPDLPP ++AD+H++A+KAAMP LP AT +FK YGL ++ ++CA + ++ +L+ Sbjct: 247 ILQQTRSFDADKGTTFALRSKEEADDYRYFPEPDLPPFYIADKHIAAIKAAMPTLPAATEQQFKERYGLGDY-DAAVICADKDDADFYRELI 337
BLAST of mRNA_L-elsbetiae_contig1520.3715.1 vs. uniprot
Match: UPI0006447B19 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006447B19) HSP 1 Score: 94.7 bits (234), Expect = 1.690e-20 Identity = 47/92 (51.09%), Postives = 63/92 (68.48%), Query Frame = 1 Query: 4 VLRETRGFDVAKGETTHLRRKEGSVDYRFCPEPDLPPLFVADEHVSALKAAMPELPEATMARFKRDYGLPEHLSRLIVCAAGGASGYFEDLV 279 VLRETRGFD A G+T H+R KE VDYRF PEPDLPPL ++D+++ +++ M ELP+A +R RDY + EH ++V A YFE +V Sbjct: 270 VLRETRGFDQASGQTFHMRTKEDEVDYRFFPEPDLPPLILSDDYIDSIRNKMVELPDALKSRLMRDYQIAEHEVDVLVEDRDVAQ-YFEAVV 360
BLAST of mRNA_L-elsbetiae_contig1520.3715.1 vs. uniprot
Match: A0A3R5Y507_9BACT (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Geovibrio thiophilus TaxID=139438 RepID=A0A3R5Y507_9BACT) HSP 1 Score: 92.0 bits (227), Expect = 1.430e-19 Identity = 43/94 (45.74%), Postives = 65/94 (69.15%), Query Frame = 1 Query: 4 VLRETRGFDVAKGETTHLRRKEGSVDYRFCPEPDLPPLFVADEHVSALKAAMPELPEATMARFKRDYGLPEHLSRLIVCAAGGASGYFEDLVNG 285 +++ETR +D AKG T +R KE + DYR+ P+PDL P+ ++DE+V A++A +PELP+A MARF +Y LPEH + + A + YFE+ + G Sbjct: 247 IVQETRLWDAAKGITVSMRSKEEANDYRYFPDPDLVPIILSDEYVEAVRATLPELPDAKMARFMSEYALPEH-DAIALTAEKAYADYFEEALKG 339
BLAST of mRNA_L-elsbetiae_contig1520.3715.1 vs. uniprot
Match: A0A397C0B5_9STRA (GatB_Yqey domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397C0B5_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 2.520e-19 Identity = 46/95 (48.42%), Postives = 60/95 (63.16%), Query Frame = 1 Query: 4 VLRETRGFDVAKGETTHLRRKEGSVDYRFCPEPDLPPLFVADEHVSALKAAMPELPEATMARFKRDYGLPEHLSRLIVCAAGGASGYFEDLVNGR 288 + +ETR FD A G T +R KEG+ DYRF PEPDLPPL ++ V KA++PELP+ AR RDYGL + S ++V A YFE++ GR Sbjct: 163 IEKETRTFDAATGMTRRMRSKEGAKDYRFFPEPDLPPLVISATFVDDAKASLPELPDQMKARLSRDYGLSAYESAILVHTPH-AVAYFEEVATGR 256
BLAST of mRNA_L-elsbetiae_contig1520.3715.1 vs. uniprot
Match: A0A3R6Z786_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6Z786_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 3.010e-19 Identity = 46/95 (48.42%), Postives = 60/95 (63.16%), Query Frame = 1 Query: 4 VLRETRGFDVAKGETTHLRRKEGSVDYRFCPEPDLPPLFVADEHVSALKAAMPELPEATMARFKRDYGLPEHLSRLIVCAAGGASGYFEDLVNGR 288 + +ETR FD A G T +R KEG+ DYRF PEPDLPPL ++ V KA++PELP+ AR RDYGL + S ++V A YFE++ GR Sbjct: 283 IEKETRTFDAATGMTRRMRSKEGAKDYRFFPEPDLPPLVISATFVDDAKASLPELPDQMKARLSRDYGLSAYESAILVHTPH-AVAYFEEVATGR 376
BLAST of mRNA_L-elsbetiae_contig1520.3715.1 vs. uniprot
Match: A0A554JM02_9BACT (Aspartyl-tRNA(Asn) amidotransferase subunit B / Glutamyl-tRNA(Gln) amidotransferase subunit B (Fragment) n=1 Tax=Parcubacteria group bacterium Gr01-1014_66 TaxID=2017191 RepID=A0A554JM02_9BACT) HSP 1 Score: 90.5 bits (223), Expect = 3.170e-19 Identity = 45/93 (48.39%), Postives = 63/93 (67.74%), Query Frame = 1 Query: 4 VLRETRGFDVAKGETTHLRRKEGSVDYRFCPEPDLPPLFVADEHVSALKAAMPELPEATMARFKRDYGLPEHLSRLIVCAAGGASGYFEDLVN 282 V +ETRG+D KG T R KE + DYR+ PEPDLPPL ++DE + L+A++PELP ARF R+YGL E +S ++ GA+ YFE +++ Sbjct: 246 VQQETRGWDEQKGITFPQRSKEEAHDYRYFPEPDLPPLEISDELIEELRASLPELPHEKAARFMREYGLDEEMSEILTRDHKGAN-YFESIIS 337
BLAST of mRNA_L-elsbetiae_contig1520.3715.1 vs. uniprot
Match: W4FIX4_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FIX4_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 5.510e-19 Identity = 46/95 (48.42%), Postives = 60/95 (63.16%), Query Frame = 1 Query: 4 VLRETRGFDVAKGETTHLRRKEGSVDYRFCPEPDLPPLFVADEHVSALKAAMPELPEATMARFKRDYGLPEHLSRLIVCAAGGASGYFEDLVNGR 288 + +ETR FD A G T +R KEG+ DYRF PEPDLPPL ++ V KA++PELP+ AR RDYGL + S ++V A YFE++ GR Sbjct: 283 IEKETRTFDAATGMTRRMRSKEGAKDYRFFPEPDLPPLVISARFVDDAKASLPELPDQMKARLGRDYGLSAYESAILVHTPH-AVAYFEEVATGR 376
BLAST of mRNA_L-elsbetiae_contig1520.3715.1 vs. uniprot
Match: UPI001ACC25E8 (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=UPI001ACC25E8) HSP 1 Score: 89.7 bits (221), Expect = 9.830e-19 Identity = 44/92 (47.83%), Postives = 63/92 (68.48%), Query Frame = 1 Query: 4 VLRETRGFDVAKGETTHLRRKEGSVDYRFCPEPDLPPLFVADEHVSALKAAMPELPEATMARFKRDYGLPEHLSRLIVCAAGGASGYFEDLV 279 V++ETR +D + ET +R KE + DYR+ P+PDLPPL ++ E ++ +KA MPELPEA ARF YGLP+H + ++ + AS YFE+ V Sbjct: 258 VVQETRLYDPDRDETRSMRSKEDAQDYRYFPDPDLPPLAISGEWIARVKAGMPELPEAMRARFGTAYGLPDHDAAMLTASRETAS-YFEEAV 348 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1520.3715.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1520.3715.1 >prot_L-elsbetiae_contig1520.3715.1 ID=prot_L-elsbetiae_contig1520.3715.1|Name=mRNA_L-elsbetiae_contig1520.3715.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=107bp GVLRETRGFDVAKGETTHLRRKEGSVDYRFCPEPDLPPLFVADEHVSALKback to top mRNA from alignment at L-elsbetiae_contig1520:23326..24922+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1520.3715.1 ID=mRNA_L-elsbetiae_contig1520.3715.1|Name=mRNA_L-elsbetiae_contig1520.3715.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1597bp|location=Sequence derived from alignment at L-elsbetiae_contig1520:23326..24922+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1520:23326..24922+ >mRNA_L-elsbetiae_contig1520.3715.1 ID=mRNA_L-elsbetiae_contig1520.3715.1|Name=mRNA_L-elsbetiae_contig1520.3715.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=642bp|location=Sequence derived from alignment at L-elsbetiae_contig1520:23326..24922+ (Laminarionema elsbetiae ELsaHSoW15)back to top |