mRNA_L-elsbetiae_contig15079.3639.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig15079.3639.1
Unique NamemRNA_L-elsbetiae_contig15079.3639.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig15079.3639.1 vs. uniprot
Match: A0A6H5L7S1_9PHAE (DOT1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7S1_9PHAE)

HSP 1 Score: 144 bits (364), Expect = 8.200e-39
Identity = 70/78 (89.74%), Postives = 71/78 (91.03%), Query Frame = 1
Query:    1 SFLEPGCDWSDADLVFANSTCFAEDTLSAIAERAGLLRPGARVVTFTTALKTPWLRVLVKRRYQMSWGPATVFVHQKL 234
            SFL+P CDWSD DLVFANSTCFAEDTL AIA RA LLRPGARVVTFTTALKT WLRVL KRRYQMSWGPATVFVHQKL
Sbjct:  362 SFLDPACDWSDGDLVFANSTCFAEDTLLAIARRAELLRPGARVVTFTTALKTFWLRVLTKRRYQMSWGPATVFVHQKL 439          
BLAST of mRNA_L-elsbetiae_contig15079.3639.1 vs. uniprot
Match: D8LP02_ECTSI (DOT1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP02_ECTSI)

HSP 1 Score: 144 bits (362), Expect = 8.390e-39
Identity = 69/78 (88.46%), Postives = 71/78 (91.03%), Query Frame = 1
Query:    1 SFLEPGCDWSDADLVFANSTCFAEDTLSAIAERAGLLRPGARVVTFTTALKTPWLRVLVKRRYQMSWGPATVFVHQKL 234
            SFL+P CDWSD DLVFANSTCFAEDTL AIA RA LLRPGARVVTFTTALKT WLRVL KRRYQMSWGPATVF+HQKL
Sbjct:  287 SFLDPACDWSDGDLVFANSTCFAEDTLLAIARRAELLRPGARVVTFTTALKTLWLRVLTKRRYQMSWGPATVFLHQKL 364          
BLAST of mRNA_L-elsbetiae_contig15079.3639.1 vs. uniprot
Match: A0A7S4DA36_HETAK (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DA36_HETAK)

HSP 1 Score: 108 bits (270), Expect = 1.060e-27
Identity = 51/81 (62.96%), Postives = 62/81 (76.54%), Query Frame = 1
Query:    1 SFLEPGCDWSDADLVFANSTCFAEDTLSAIAERA---GLLRPGARVVTFTTALKTPWLRVLVKRRYQMSWGPATVFVHQKL 234
            SFL+   DW+D DLVFANSTCF E  L A+A R    G LRPGARVVTFT AL++ W R++ K+R+ MSWGPATV++HQKL
Sbjct:   63 SFLDSEYDWTDGDLVFANSTCFEEALLDAVARRGEGPGGLRPGARVVTFTLALRSAWFRIIYKKRFNMSWGPATVYIHQKL 143          
BLAST of mRNA_L-elsbetiae_contig15079.3639.1 vs. uniprot
Match: A0A7R9YF92_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YF92_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 1.050e-23
Identity = 42/71 (59.15%), Postives = 57/71 (80.28%), Query Frame = 1
Query:   22 DWSDADLVFANSTCFAEDTLSAIAERAGLLRPGARVVTFTTALKTPWLRVLVKRRYQMSWGPATVFVHQKL 234
            DWSD DLVFANSTCF +  L  IA+ A  ++ G+R++TFT AL++ WLRV+ K+++ MSWGPATV++HQKL
Sbjct:   63 DWSDGDLVFANSTCFEQSLLLRIAQTAEKMKAGSRIITFTVALQSLWLRVVYKKKFNMSWGPATVYIHQKL 133          
BLAST of mRNA_L-elsbetiae_contig15079.3639.1 vs. uniprot
Match: A0A7S3Y0K5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0K5_HETAK)

HSP 1 Score: 95.1 bits (235), Expect = 3.870e-23
Identity = 45/69 (65.22%), Postives = 54/69 (78.26%), Query Frame = 1
Query:   37 DLVFANSTCFAEDTLSAIAERA---GLLRPGARVVTFTTALKTPWLRVLVKRRYQMSWGPATVFVHQKL 234
            DLVFANSTCF E  L A+A R    G LRPGARVVTFT AL++ W R++ K+R+ MSWGPATV++HQKL
Sbjct:   51 DLVFANSTCFEEALLDAVARRGEGPGGLRPGARVVTFTLALRSAWFRIIYKKRFNMSWGPATVYIHQKL 119          
BLAST of mRNA_L-elsbetiae_contig15079.3639.1 vs. uniprot
Match: A0A7S1XRV9_9STRA (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XRV9_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 4.970e-23
Identity = 44/71 (61.97%), Postives = 56/71 (78.87%), Query Frame = 1
Query:   22 DWSDADLVFANSTCFAEDTLSAIAERAGLLRPGARVVTFTTALKTPWLRVLVKRRYQMSWGPATVFVHQKL 234
            DW+D DLVFANSTCF +  L  IA  A  L+PGAR++TFT AL + WLRV+ K+++ MSWGPATV++HQKL
Sbjct:  212 DWADGDLVFANSTCFEQTLLRDIARVAERLKPGARIITFTVALTSLWLRVVYKKKFNMSWGPATVYIHQKL 282          
BLAST of mRNA_L-elsbetiae_contig15079.3639.1 vs. uniprot
Match: A0A7S3Y0M2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0M2_HETAK)

HSP 1 Score: 95.1 bits (235), Expect = 1.080e-22
Identity = 45/69 (65.22%), Postives = 54/69 (78.26%), Query Frame = 1
Query:   37 DLVFANSTCFAEDTLSAIAERA---GLLRPGARVVTFTTALKTPWLRVLVKRRYQMSWGPATVFVHQKL 234
            DLVFANSTCF E  L A+A R    G LRPGARVVTFT AL++ W R++ K+R+ MSWGPATV++HQKL
Sbjct:   51 DLVFANSTCFEEALLDAVARRGEGPGGLRPGARVVTFTLALRSAWFRIIYKKRFNMSWGPATVYIHQKL 119          
BLAST of mRNA_L-elsbetiae_contig15079.3639.1 vs. uniprot
Match: A0A7S1TW39_9STRA (Histone-lysine N-methyltransferase, H3 lysine-79 specific (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TW39_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 2.450e-21
Identity = 44/78 (56.41%), Postives = 58/78 (74.36%), Query Frame = 1
Query:    1 SFLEPGCDWSDADLVFANSTCFAEDTLSAIAERAGLLRPGARVVTFTTALKTPWLRVLVKRRYQMSWGPATVFVHQKL 234
            SFL+   DWSD D++FANSTCF +D +  IA RA  L+PGA V+TFT  L++    VL K+RY MSWGPATV++H++L
Sbjct:  197 SFLD--YDWSDGDVIFANSTCFDDDLMRKIAVRAAALQPGAYVITFTKGLESEDFEVLFKKRYDMSWGPATVYIHRRL 272          
BLAST of mRNA_L-elsbetiae_contig15079.3639.1 vs. uniprot
Match: D7FY79_ECTSI (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY79_ECTSI)

HSP 1 Score: 94.0 bits (232), Expect = 8.840e-21
Identity = 46/77 (59.74%), Postives = 57/77 (74.03%), Query Frame = 1
Query:    1 SFLEPGCDWSDADLVFANSTCFAEDTLSAIAERAGLLRPGARVVTFTTALKTPWLRVLVKRRYQMSWGPATVFVHQK 231
            SFLE   DWSD D VFANSTCF ED + A+A +A  L+PG+ VVTFT  L +    VL KRR++MSWGPATVF+H++
Sbjct:  179 SFLE--YDWSDGDCVFANSTCFPEDLMDALARQAEELKPGSIVVTFTKGLDSTAFEVLSKRRFEMSWGPATVFIHRR 253          
BLAST of mRNA_L-elsbetiae_contig15079.3639.1 vs. uniprot
Match: A0A6H5K9P8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9P8_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 1.170e-20
Identity = 46/77 (59.74%), Postives = 57/77 (74.03%), Query Frame = 1
Query:    1 SFLEPGCDWSDADLVFANSTCFAEDTLSAIAERAGLLRPGARVVTFTTALKTPWLRVLVKRRYQMSWGPATVFVHQK 231
            SFLE   DWSD D VFANSTCF ED + A+A +A  L+PG+ VVTFT  L +    VL KRR++MSWGPATVF+H++
Sbjct:  153 SFLE--YDWSDGDCVFANSTCFPEDLMDALARQAEELKPGSIVVTFTKGLDSTAFEVLSKRRFEMSWGPATVFIHRR 227          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15079.3639.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7S1_9PHAE8.200e-3989.74DOT1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LP02_ECTSI8.390e-3988.46DOT1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A7S4DA36_HETAK1.060e-2762.96Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]
A0A7R9YF92_9STRA1.050e-2359.15Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S3Y0K5_HETAK3.870e-2365.22Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1XRV9_9STRA4.970e-2361.97Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]
A0A7S3Y0M2_HETAK1.080e-2265.22Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1TW39_9STRA2.450e-2156.41Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]
D7FY79_ECTSI8.840e-2159.74Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]
A0A6H5K9P8_9PHAE1.170e-2059.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig15079contigL-elsbetiae_contig15079:3550..3783 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score144.8
Seed ortholog evalue1.7e-32
Seed eggNOG ortholog2880.D8LP02
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Histone methylation protein DOT1
EggNOG OGs2BR00@1,2S1KF@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionDOT1 histone methyltransferase
Ec32 orthologEc-06_007110.1
Exons1
Model size234
Cds size234
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815612.0859861-CDS-L-elsbetiae_contig15079:3549..37831622815612.0859861-CDS-L-elsbetiae_contig15079:3549..3783Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15079 3550..3783 -
1691682990.7853434-CDS-L-elsbetiae_contig15079:3549..37831691682990.7853434-CDS-L-elsbetiae_contig15079:3549..3783Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15079 3550..3783 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig15079.3639.1prot_L-elsbetiae_contig15079.3639.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig15079 3550..3783 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig15079.3639.1

>prot_L-elsbetiae_contig15079.3639.1 ID=prot_L-elsbetiae_contig15079.3639.1|Name=mRNA_L-elsbetiae_contig15079.3639.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=78bp
SFLEPGCDWSDADLVFANSTCFAEDTLSAIAERAGLLRPGARVVTFTTAL
KTPWLRVLVKRRYQMSWGPATVFVHQKL
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mRNA from alignment at L-elsbetiae_contig15079:3550..3783-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig15079.3639.1 ID=mRNA_L-elsbetiae_contig15079.3639.1|Name=mRNA_L-elsbetiae_contig15079.3639.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=234bp|location=Sequence derived from alignment at L-elsbetiae_contig15079:3550..3783- (Laminarionema elsbetiae ELsaHSoW15)
TCTTTTCTGGAACCGGGCTGCGACTGGTCCGACGCGGACTTGGTGTTCGC CAACTCGACCTGCTTCGCGGAGGACACGCTGTCGGCCATCGCCGAGAGGG CCGGGCTTCTCCGCCCCGGCGCGCGCGTGGTGACGTTCACGACGGCCCTC AAGACCCCCTGGCTGAGGGTGCTCGTGAAGAGGAGGTACCAGATGTCGTG GGGCCCCGCGACGGTGTTCGTTCACCAGAAGCTG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig15079:3550..3783-

>mRNA_L-elsbetiae_contig15079.3639.1 ID=mRNA_L-elsbetiae_contig15079.3639.1|Name=mRNA_L-elsbetiae_contig15079.3639.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=468bp|location=Sequence derived from alignment at L-elsbetiae_contig15079:3550..3783- (Laminarionema elsbetiae ELsaHSoW15)
TCTTTTCTGGAACCGGGCTGCGACTGGTCCGACGCGGACTTGGTGTTCGC
CAACTCGACCTGCTTCGCGGAGGACACGCTGTCGGCCATCGCCGAGAGGG
CCGGGCTTCTCCGCCCCGGCGCGCGCGTGGTGACGTTCACGACGGCCCTC
AAGACCCCCTGGCTGAGGGTGCTCGTGAAGAGGAGGTACCAGATGTCGTG
GGGCCCCGCGACGGTGTTCGTTCACCAGAAGCTGTCTTTTCTGGAACCGG
GCTGCGACTGGTCCGACGCGGACTTGGTGTTCGCCAACTCGACCTGCTTC
GCGGAGGACACGCTGTCGGCCATCGCCGAGAGGGCCGGGCTTCTCCGCCC
CGGCGCGCGCGTGGTGACGTTCACGACGGCCCTCAAGACCCCCTGGCTGA
GGGTGCTCGTGAAGAGGAGGTACCAGATGTCGTGGGGCCCCGCGACGGTG
TTCGTTCACCAGAAGCTG
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