mRNA_L-elsbetiae_contig15048.3624.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig15048.3624.1 vs. uniprot
Match: A0A6H5KCD9_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCD9_9PHAE) HSP 1 Score: 229 bits (584), Expect = 8.900e-60 Identity = 216/448 (48.21%), Postives = 238/448 (53.12%), Query Frame = 2 Query: 2 VDPSRNIPYYCNTTTGETQWERPPXXXXXXXXXTRAVRSPHAPRMPRAATXXXXXXXXSSYNRGGNPSAVNPAVPGPTAAA-FSPSPVKPGFGGPVPGMAGGGIGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQHQXXXXXXXXXXXXXXXXXXXXXXYSPMASA-VVAPYAGPGG---VNAGSGYAGA-----------------------AAAASPHRQQGPGMXXXXXXXXXXXXXXXXRHPGAAGFQRQGASNSNGMGVMPGPGGA-----------GVRSPGVGMQGMREGGGGVXXXSAPVAAAPVSTAXXXXXXXXXXADPAPP-------SDAESQAVVSALNGMLGTLSETPLSPPEKKMLGDVTKAVGVLFAKMGRGQVEQETLGKVGQLVDSLQARDITTANAIQQGLANSAWANHKDWLKGLKYLTTLVSRRLV 1207 +DPSRNIPYYCNT TGETQWERP TRAV SPHAPRMP+A + S YNR NPA G AAA F SPVKPG+ GP+ + GG +HQ XXXXXXX +P+AS V APYAGPGG +NAG G +A++SP++Q G XX XXX +PG A SN M PGG V SP M+GMREG XXX XXXXXXXXXX SDAESQAVVSALN MLG LSE PLSPPEKKMLGDVTKAVG+LF KMGRGQ+EQETL KVG LV+SLQARDI A A+QQGLANSAWA+HKDWLKGLKYLTTLVSRRLV Sbjct: 911 MDPSRNIPYYCNTATGETQWERP---APPPAATTRAVPSPHAPRMPQATS--------SPYNR------ANPAAAGAGAAASFPTSPVKPGYTGPISALTAGGAS----------------------------FGRHQPQQXXXXXXXRQYS---------NPVASGGVAAPYAGPGGATVMNAGPGXXXXXXXXXXXXXXXXXXXXXXXXXXXSASSSPYQQGG--------FVGXXTPGXXXXYPGXXXXXGD-AGGSNRMR----PGGXXXXXXXXXXXXAVHSP---MRGMREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDAESQAVVSALNDMLGALSEAPLSPPEKKMLGDVTKAVGILFGKMGRGQLEQETLAKVGHLVESLQARDIKRAGAVQQGLANSAWASHKDWLKGLKYLTTLVSRRLV 1288
BLAST of mRNA_L-elsbetiae_contig15048.3624.1 vs. uniprot
Match: D8LBR5_ECTSI (Vesicle coat complex COPII, subunit SEC31 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBR5_ECTSI) HSP 1 Score: 193 bits (491), Expect = 3.900e-48 Identity = 97/108 (89.81%), Postives = 101/108 (93.52%), Query Frame = 2 Query: 884 SDAESQAVVSALNGMLGTLSETPLSPPEKKMLGDVTKAVGVLFAKMGRGQVEQETLGKVGQLVDSLQARDITTANAIQQGLANSAWANHKDWLKGLKYLTTLVSRRLV 1207 SDAESQAVVSALNGMLG LSE PLSPPEKKMLGDVTKAVG+LF KMGRGQVEQETL KVGQLV+SLQARDI A A+QQGLANSAWA+HKDWLKGLKYLTTLVSRRLV Sbjct: 835 SDAESQAVVSALNGMLGALSEAPLSPPEKKMLGDVTKAVGILFGKMGRGQVEQETLAKVGQLVESLQARDIKRAGAVQQGLANSAWASHKDWLKGLKYLTTLVSRRLV 942
BLAST of mRNA_L-elsbetiae_contig15048.3624.1 vs. uniprot
Match: A0A7S1ZFT1_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZFT1_TRICV) HSP 1 Score: 97.1 bits (240), Expect = 5.670e-18 Identity = 44/109 (40.37%), Postives = 62/109 (56.88%), Query Frame = 2 Query: 878 PPSDAESQAVVSALNGMLGTLSETPLSPPEKKMLGDVTKAVGVLFAKMGRGQVEQETLGKVGQLVDSLQARDITTANAIQQGLANSAWANHKDWLKGLKYLTTLVSRRL 1204 P AE + L +G L L+P E + L ++ K G+ K+ RGQ++ T G+ GQLV +LQ RD +A A Q L NS W +HKDWLKG+K+L L ++L Sbjct: 257 PEIPAEHRGTTDGLQAFIGQLKGVALTPTEMRQLAEIEKGAGIFMKKLSRGQIDPTTAGQTGQLVLALQGRDYRSAGAAQSALVNSVWRDHKDWLKGMKFLIQLAGKKL 365
BLAST of mRNA_L-elsbetiae_contig15048.3624.1 vs. uniprot
Match: A0A7S0C0D8_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C0D8_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 4.090e-16 Identity = 49/130 (37.69%), Postives = 70/130 (53.85%), Query Frame = 2 Query: 815 AAPVSTAXXXXXXXXXXADPAPPSDAESQAVVSALNGMLGTLSETPLSPPEKKMLGDVTKAVGVLFAKMGRGQVEQETLGKVGQLVDSLQARDITTANAIQQGLANSAWANHKDWLKGLKYLTTLVSRRL 1204 AAPVS AD P +D Q V N L PL+P E+K L + K V +L K+ RG ++ + + KV QLV + ++R+ A IQ+ L +S W++HKDWLKGLK+L L ++L Sbjct: 15 AAPVSGTFDASLANQVSADHQPIADGLLQIVALLTNPNL------PLNPSERKQLTESEKGVAILIKKLSRGAIDPDVVAKVQQLVVAAESRNYVAAGGIQKSLVDSVWSDHKDWLKGLKFLIQLAMKKL 138
BLAST of mRNA_L-elsbetiae_contig15048.3624.1 vs. uniprot
Match: A0A7S2QVW0_9STRA (Hypothetical protein n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QVW0_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 9.810e-14 Identity = 42/105 (40.00%), Postives = 64/105 (60.95%), Query Frame = 2 Query: 893 ESQAVVSALNGMLGTLSETPLSPPEKKMLGDVTKAVGVLFAKMGR-GQVEQETLGKVGQLVDSLQARDITTANAIQQGLANSAWANHKDWLKGLKYLTTLVSRRL 1204 E VV+ L G++ L L+ PEKK LG+++K +L+ K+ ++Q+T K+ LV +LQ RD TA ++ LAN+ W HKD+LKG+KYL L ++L Sbjct: 216 EMMTVVNGLKGIVDQLQGVQLAMPEKKQLGEISKGCEILYVKLATPNAIDQDTGTKLQTLVAALQNRDYATAGSMSTVLANTVWKQHKDFLKGIKYLIQLAGKKL 320
BLAST of mRNA_L-elsbetiae_contig15048.3624.1 vs. uniprot
Match: A0A7S4VZF3_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VZF3_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 1.110e-12 Identity = 41/110 (37.27%), Postives = 61/110 (55.45%), Query Frame = 2 Query: 878 PPSDAESQAVVSALNGMLGTLSETPLSPPEKKMLGDVTKAVGVLFAKMGRGQVEQETLGKVGQLVDSLQARDITTANAIQQGLANSAWANHKDWLKGLKYLTTLVSRRLV 1207 P AE Q + L + LS EKK + ++ K V +L K+ RG ++ E KV +V ++Q RD +A AIQ+ L NS W HKDWL+G+K+L S+R++ Sbjct: 943 PALSAEYQPISDGLLPFVTYLSSVVTGAKEKKEMVEIEKGVAILLKKLARGDIDSEIAPKVMTMVTAMQNRDYGSAAAIQKALVNSDWKEHKDWLRGIKFLIQFASKRII 1052
BLAST of mRNA_L-elsbetiae_contig15048.3624.1 vs. uniprot
Match: K0S465_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S465_THAOC) HSP 1 Score: 77.8 bits (190), Expect = 1.790e-12 Identity = 38/113 (33.63%), Postives = 60/113 (53.10%), Query Frame = 2 Query: 869 DPAPPSDAESQAVVSALNGMLGTLSETPLSPPEKKMLGDVTKAVGVLFAKMGRGQVEQETLGKVGQLVDSLQARDITTANAIQQGLANSAWANHKDWLKGLKYLTTLVSRRLV 1207 D P E + V L ++ L +P E+K + K+ + + G+V+ + KVG +V SLQ RD TA++I GL ++ W +HKDWLKGLK+L L ++ + Sbjct: 109 DTVPQLPDEYRHVQDGLLSVVAQLKAAASNPMERKQAAESEKSAAIFIKTLAMGRVDADVADKVGSVVRSLQGRDYATASSIVTGLVSNHWKDHKDWLKGLKFLVQLAGKKQI 221
BLAST of mRNA_L-elsbetiae_contig15048.3624.1 vs. uniprot
Match: A0A7R9WWV0_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WWV0_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 1.490e-11 Identity = 34/95 (35.79%), Postives = 54/95 (56.84%), Query Frame = 2 Query: 917 LNGMLGTLSETPLSPPEKKMLGDVTKAVGVLFAKMGRGQVEQETLGKVGQLVDSLQARDITTANAIQQGLANSAWANHKDWLKGLKYLTTLVSRR 1201 L ++ L +T L+ +K+ L + K V V ++ RG V ++ GK+ + ++Q D A AIQ GL N+ W HKDWLKG+K L L +++ Sbjct: 108 LLSLIDALKQTQLAAGDKRQLAEAEKGVAVFLKRLARGDVPEDVAGKMMTMTTTIQTYDWKNAQAIQTGLVNTDWKEHKDWLKGIKALLQLSTKK 202
BLAST of mRNA_L-elsbetiae_contig15048.3624.1 vs. uniprot
Match: A0A7S2XZD2_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZD2_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 2.730e-11 Identity = 33/100 (33.00%), Postives = 60/100 (60.00%), Query Frame = 2 Query: 905 VVSALNGMLGTLSETPLSPPEKKMLGDVTKAVGVLFAKMGRGQVEQETLGKVGQLVDSLQARDITTANAIQQGLANSAWANHKDWLKGLKYLTTLVSRRL 1204 +V ++N + L++ L+ ++K LG+V KA+ +LF K+ G + ++ + ++ + L ARD A A Q LA+ W +HK WL+G K+L + S++L Sbjct: 77 IVGSINTCIQALTQCALNGMDRKQLGEVNKAIPILFKKLNSGDIPEDAVVQLRGVAQCLNARDWQGAAASQSRLADQHWTDHKAWLRGTKFLIQMASKKL 176
BLAST of mRNA_L-elsbetiae_contig15048.3624.1 vs. uniprot
Match: A0A7S2VYN5_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2VYN5_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 5.660e-11 Identity = 39/114 (34.21%), Postives = 59/114 (51.75%), Query Frame = 2 Query: 869 DPAPPSDA--ESQAVVSALNGMLGTLSETPLSPPEKKMLGDVTKAVGVLFAKMGRGQVEQETLGKVGQLVDSLQARDITTANAIQQGLANSAWANHKDWLKGLKYLTTLVSRRL 1204 DP P + E + + L + ++S L+ EKK + +V K V V K+ RG + + +V L LQ RD ANAI L N+ W + KDWL+G++ L L SR++ Sbjct: 255 DPTKPIEVSEEYKPLTEGLMSYVCSMSSLQLTATEKKQIAEVEKGVAVFIKKLARGDIGSHIVSQVSNLFAGLQNRDYQAANAIHNSLVNTEWKDQKDWLRGMRVLIQLASRKM 368 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15048.3624.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig15048.3624.1 >prot_L-elsbetiae_contig15048.3624.1 ID=prot_L-elsbetiae_contig15048.3624.1|Name=mRNA_L-elsbetiae_contig15048.3624.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=384bp GGPLAKHPLLLQHDHWRDPVGAAPAASGRGRRRHPCRPFPARASDAPGRHback to top mRNA from alignment at L-elsbetiae_contig15048:553..3855- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig15048.3624.1 ID=mRNA_L-elsbetiae_contig15048.3624.1|Name=mRNA_L-elsbetiae_contig15048.3624.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3303bp|location=Sequence derived from alignment at L-elsbetiae_contig15048:553..3855- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig15048:553..3855- >mRNA_L-elsbetiae_contig15048.3624.1 ID=mRNA_L-elsbetiae_contig15048.3624.1|Name=mRNA_L-elsbetiae_contig15048.3624.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2304bp|location=Sequence derived from alignment at L-elsbetiae_contig15048:553..3855- (Laminarionema elsbetiae ELsaHSoW15)back to top |